RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 PROX2Q3B8N5 592 aa6.62□□□□□ -1.35
PCNX1-214ENST00000556849 KMT5BQ4FZB7 885 aa6.62□□□□□ -1.35
PCNX1-214ENST00000556849 FTSJ3Q8IY81 847 aaKnown RBP6.62□□□□□ -1.35
PCNX1-214ENST00000556849 ARMC2Q8NEN0 867 aa6.62□□□□□ -1.35
PCNX1-214ENST00000556849 SNX21Q969T3 373 aa6.62□□□□□ -1.35
PCNX1-214ENST00000556849 MARVELD3Q96A59 401 aa6.62□□□□□ -1.35
PCNX1-214ENST00000556849 PRIMPOLQ96LW4 560 aa6.62□□□□□ -1.35
PCNX1-214ENST00000556849 GBP4Q96PP9 640 aa6.62□□□□□ -1.35
PCNX1-214ENST00000556849 TUT1Q9H6E5 874 aaKnown RBP6.62□□□□□ -1.35
PCNX1-214ENST00000556849 CXXC1Q9P0U4 656 aaPredicted RBP6.62□□□□□ -1.35
PCNX1-214ENST00000556849 MTUS2Q5JR59 1369 aa6.61□□□□□ -1.35
PCNX1-214ENST00000556849 CARMIL1Q5VZK9 1371 aa6.61□□□□□ -1.35
PCNX1-214ENST00000556849 ZNF521Q96K83 1311 aa6.61□□□□□ -1.35
PCNX1-214ENST00000556849 SMARCA5O60264 1052 aaPredicted RBP6.61□□□□□ -1.35
PCNX1-214ENST00000556849 ABL1P00519 1130 aa6.61□□□□□ -1.35
PCNX1-214ENST00000556849 F12P00748 615 aaPredicted RBP6.61□□□□□ -1.35
PCNX1-214ENST00000556849 ZNF445P59923 1031 aa6.61□□□□□ -1.35
PCNX1-214ENST00000556849 HMGN5P82970 282 aaKnown RBP6.61□□□□□ -1.35
PCNX1-214ENST00000556849 PDE3AQ14432 1141 aa6.61□□□□□ -1.35
PCNX1-214ENST00000556849 TRMT2AQ8IZ69 625 aaKnown RBP6.61□□□□□ -1.35
PCNX1-214ENST00000556849 SLKQ9H2G2 1235 aaPredicted RBP6.61□□□□□ -1.35
PCNX1-214ENST00000556849 NOD1Q9Y239 953 aa6.61□□□□□ -1.35
PCNX1-214ENST00000556849 R3HCC1Q9Y3T6 440 aaKnown RBP6.61□□□□□ -1.35
PCNX1-214ENST00000556849 UGGT2Q9NYU1 1516 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 CAMSAP2Q08AD1 1489 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 SUPT6HQ7KZ85 1726 aaKnown RBP6.6□□□□□ -1.35
PCNX1-214ENST00000556849 SCAMP3O14828 347 aaKnown RBP6.6□□□□□ -1.35
PCNX1-214ENST00000556849 HOXB3P14651 431 aaPredicted RBP6.6□□□□□ -1.35
PCNX1-214ENST00000556849 NASPP49321 788 aaPredicted RBP6.6□□□□□ -1.35
PCNX1-214ENST00000556849 SEC13P55735 322 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 CLDN10P78369 228 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 OCLNQ16625 522 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 EAPPQ56P03 285 aaPredicted RBP6.6□□□□□ -1.35
PCNX1-214ENST00000556849 MORN1Q5T089 497 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 PDXDC2PQ6P474 469 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 GAS2L3Q86XJ1 694 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 TEX2Q8IWB9 1127 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 SMC5Q8IY18 1101 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 MYRIPQ8NFW9 859 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 RABGEF1Q9UJ41 708 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 ZHX1Q9UKY1 873 aaPredicted RBP6.6□□□□□ -1.35
PCNX1-214ENST00000556849 ZKSCAN5Q9Y2L8 839 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 SNAPC4Q5SXM2 1469 aa6.6□□□□□ -1.35
PCNX1-214ENST00000556849 PLIN1O60240 522 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 ERCC5P28715 1186 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-214ENST00000556849 FKBP4Q02790 459 aaKnown RBP eCLIP6.59□□□□□ -1.35
PCNX1-214ENST00000556849 RAB3GAP1Q15042 981 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 PTPRNQ16849 979 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 TSNAXIP1Q2TAA8 658 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 DUSP27Q5VZP5 1158 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 TRAF7Q6Q0C0 670 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 CREBRFQ8IUR6 639 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 RGL4Q8IZJ4 473 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 PMFBP1Q8TBY8 1022 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 ZNF594Q96JF6 807 aaPredicted RBP6.59□□□□□ -1.35
PCNX1-214ENST00000556849 ZBED2Q9BTP6 218 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 KRTAP3-2Q9BYR7 98 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 EPRSP07814 1512 aaKnown RBP6.59□□□□□ -1.35
PCNX1-214ENST00000556849 ARHGEF12Q9NZN5 1544 aa6.59□□□□□ -1.35
PCNX1-214ENST00000556849 RTEL1-TNFRSF6BF6WH68 1400 aa6.59□□□□□ -1.36
PCNX1-214ENST00000556849 YEATS2Q9ULM3 1422 aa6.59□□□□□ -1.36
PCNX1-214ENST00000556849 PRMT3O60678 531 aa6.58□□□□□ -1.36
PCNX1-214ENST00000556849 GABPB1Q06547 395 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-214ENST00000556849 FAM98CQ17RN3 349 aaKnown RBP6.58□□□□□ -1.36
PCNX1-214ENST00000556849 KLHL40Q2TBA0 621 aa6.58□□□□□ -1.36
PCNX1-214ENST00000556849 NBPF1Q3BBV0 1214 aa6.58□□□□□ -1.36
PCNX1-214ENST00000556849 C20orf194Q5TEA3 1177 aa6.58□□□□□ -1.36
PCNX1-214ENST00000556849 SKAP1Q86WV1 359 aa6.58□□□□□ -1.36
PCNX1-214ENST00000556849 FEZ1Q99689 392 aa6.58□□□□□ -1.36
PCNX1-214ENST00000556849 USB1Q9BQ65 265 aaKnown RBP6.58□□□□□ -1.36
PCNX1-214ENST00000556849 TSPYL1Q9H0U9 437 aa6.58□□□□□ -1.36
PCNX1-214ENST00000556849 CCDC39Q9UFE4 941 aa6.58□□□□□ -1.36
PCNX1-214ENST00000556849 ZNF608Q9ULD9 1512 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-214ENST00000556849 POLA1P09884 1462 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-214ENST00000556849 FHOD3Q2V2M9 1422 aa6.58□□□□□ -1.36
PCNX1-214ENST00000556849 PTCD1O75127 700 aaKnown RBP6.57□□□□□ -1.36
PCNX1-214ENST00000556849 DKK1O94907 266 aa6.57□□□□□ -1.36
PCNX1-214ENST00000556849 KCNH2Q12809 1159 aa6.57□□□□□ -1.36
PCNX1-214ENST00000556849 ZNF211Q13398 564 aaPredicted RBP6.57□□□□□ -1.36
PCNX1-214ENST00000556849 NBPF14Q5TI25 921 aa6.57□□□□□ -1.36
PCNX1-214ENST00000556849 ANKRD13AQ8IZ07 590 aa6.57□□□□□ -1.36
PCNX1-214ENST00000556849 DNAJC2Q99543 621 aaKnown RBP6.57□□□□□ -1.36
PCNX1-214ENST00000556849 PRR14Q9BWN1 585 aa6.57□□□□□ -1.36
PCNX1-214ENST00000556849 SLC4A5Q9BY07 1137 aa6.57□□□□□ -1.36
PCNX1-214ENST00000556849 CHMP4BQ9H444 224 aaKnown RBP6.57□□□□□ -1.36
PCNX1-214ENST00000556849 PPP1R1BQ9UD71 204 aaPredicted RBP6.57□□□□□ -1.36
PCNX1-214ENST00000556849 SLC27A5Q9Y2P5 690 aa6.57□□□□□ -1.36
PCNX1-214ENST00000556849 PCDHB9Q9Y5E1 797 aa6.57□□□□□ -1.36
PCNX1-214ENST00000556849 GOLGA6L22H0YM25 854 aa6.56□□□□□ -1.36
PCNX1-214ENST00000556849 SCNN1AP37088 669 aa6.56□□□□□ -1.36
PCNX1-214ENST00000556849 ARHGAP4P98171 946 aa6.56□□□□□ -1.36
PCNX1-214ENST00000556849 SLFN5Q08AF3 891 aa6.56□□□□□ -1.36
PCNX1-214ENST00000556849 MRPL58Q14197 206 aaKnown RBP6.56□□□□□ -1.36
PCNX1-214ENST00000556849 SYCP1Q15431 976 aa6.56□□□□□ -1.36
PCNX1-214ENST00000556849 HSCBQ8IWL3 235 aa6.56□□□□□ -1.36
PCNX1-214ENST00000556849 GTF3C2Q8WUA4 911 aaPredicted RBP6.56□□□□□ -1.36
PCNX1-214ENST00000556849 ZNF830Q96NB3 372 aaPredicted RBP6.56□□□□□ -1.36
PCNX1-214ENST00000556849 KCNK17Q96T54 332 aa6.56□□□□□ -1.36
PCNX1-214ENST00000556849 PLXNC1O60486 1568 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms