RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 SIK1P57059 783 aa9.74□□□□□ -0.85
PCNX1-213ENST00000556846 SULT6B1Q6IMI4 303 aa9.74□□□□□ -0.85
PCNX1-213ENST00000556846 ZNF530Q6P9A1 599 aaPredicted RBP9.74□□□□□ -0.85
PCNX1-213ENST00000556846 DCAF5Q96JK2 942 aa9.74□□□□□ -0.85
PCNX1-213ENST00000556846 ASAP1Q9ULH1 1129 aa9.74□□□□□ -0.85
PCNX1-213ENST00000556846 ERVV-2B6SEH9 535 aa9.73□□□□□ -0.85
PCNX1-213ENST00000556846 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
PCNX1-213ENST00000556846 PAPPAQ13219 1627 aa9.73□□□□□ -0.85
PCNX1-213ENST00000556846 SRCAPQ6ZRS2 3230 aa9.72□□□□□ -0.85
PCNX1-213ENST00000556846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.72□□□□□ -0.85
PCNX1-213ENST00000556846 AMER1Q5JTC6 1135 aaPredicted RBP9.72□□□□□ -0.85
PCNX1-213ENST00000556846 RNF166Q96A37 237 aaPredicted RBP9.72□□□□□ -0.85
PCNX1-213ENST00000556846 ATG3Q9NT62 314 aa9.72□□□□□ -0.85
PCNX1-213ENST00000556846 NCAPD2Q15021 1401 aa9.72□□□□□ -0.85
PCNX1-213ENST00000556846 FAM205CA6NFA0 338 aa9.71□□□□□ -0.86
PCNX1-213ENST00000556846 GNPATO15228 680 aa9.71□□□□□ -0.86
PCNX1-213ENST00000556846 IL13P35225 146 aa9.71□□□□□ -0.86
PCNX1-213ENST00000556846 MKRN3Q13064 507 aaKnown RBP9.71□□□□□ -0.86
PCNX1-213ENST00000556846 SMIM5Q71RC9 77 aa9.71□□□□□ -0.86
PCNX1-213ENST00000556846 ZNF467Q7Z7K2 595 aaPredicted RBP9.71□□□□□ -0.86
PCNX1-213ENST00000556846 LINC00116Q8NCU8 138 aa9.71□□□□□ -0.86
PCNX1-213ENST00000556846 SHANK3Q9BYB0 1731 aa9.7□□□□□ -0.86
PCNX1-213ENST00000556846 MAP2P11137 1827 aaKnown RBP9.7□□□□□ -0.86
PCNX1-213ENST00000556846 PER1O15534 1290 aaPredicted RBP9.7□□□□□ -0.86
PCNX1-213ENST00000556846 DIAPH1O60610 1272 aaKnown RBP9.7□□□□□ -0.86
PCNX1-213ENST00000556846 HMOX1P09601 288 aa9.7□□□□□ -0.86
PCNX1-213ENST00000556846 SSFA2P28290 1259 aa9.7□□□□□ -0.86
PCNX1-213ENST00000556846 ITPK1Q13572 414 aa9.7□□□□□ -0.86
PCNX1-213ENST00000556846 NFATC2IPQ8NCF5 419 aa9.7□□□□□ -0.86
PCNX1-213ENST00000556846 NLGN2Q8NFZ4 835 aa9.7□□□□□ -0.86
PCNX1-213ENST00000556846 MAP3K5Q99683 1374 aa9.7□□□□□ -0.86
PCNX1-213ENST00000556846 PTCD1O75127 700 aaKnown RBP9.69□□□□□ -0.86
PCNX1-213ENST00000556846 CHRM1P11229 460 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-213ENST00000556846 TRAPPC3LQ5T215 181 aa9.69□□□□□ -0.86
PCNX1-213ENST00000556846 PLEKHG2Q9H7P9 1386 aa9.69□□□□□ -0.86
PCNX1-213ENST00000556846 RTCBQ9Y3I0 505 aaKnown RBP9.69□□□□□ -0.86
PCNX1-213ENST00000556846 U2SURPO15042 1029 aaKnown RBP9.68□□□□□ -0.86
PCNX1-213ENST00000556846 GRIN3BO60391 1043 aa9.68□□□□□ -0.86
PCNX1-213ENST00000556846 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
PCNX1-213ENST00000556846 AMIGO3Q86WK7 504 aa9.68□□□□□ -0.86
PCNX1-213ENST00000556846 CD2APQ9Y5K6 639 aa9.68□□□□□ -0.86
PCNX1-213ENST00000556846 LY75O60449 1722 aa9.68□□□□□ -0.86
PCNX1-213ENST00000556846 PKD1L3Q7Z443 1732 aa9.68□□□□□ -0.86
PCNX1-213ENST00000556846 ANKRD26Q9UPS8 1709 aa9.68□□□□□ -0.86
PCNX1-213ENST00000556846 RFC4P35249 363 aa9.67□□□□□ -0.86
PCNX1-213ENST00000556846 GOLGA2Q08379 1002 aa9.67□□□□□ -0.86
PCNX1-213ENST00000556846 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
PCNX1-213ENST00000556846 ZNF784Q8NCA9 323 aaPredicted RBP9.66□□□□□ -0.86
PCNX1-213ENST00000556846 CFAP53Q96M91 514 aa9.66□□□□□ -0.86
PCNX1-213ENST00000556846 LGR6Q9HBX8 967 aa9.66□□□□□ -0.86
PCNX1-213ENST00000556846 RNMTO43148 476 aaKnown RBP9.65□□□□□ -0.86
PCNX1-213ENST00000556846 RPS6KA4O75676 772 aa9.65□□□□□ -0.86
PCNX1-213ENST00000556846 MMP10P09238 476 aa9.65□□□□□ -0.86
PCNX1-213ENST00000556846 GSE1Q14687 1217 aa9.65□□□□□ -0.86
PCNX1-213ENST00000556846 MTHFSDQ2M296 383 aaKnown RBP9.65□□□□□ -0.86
PCNX1-213ENST00000556846 NLGN1Q8N2Q7 840 aa9.65□□□□□ -0.86
PCNX1-213ENST00000556846 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
PCNX1-213ENST00000556846 SLC4A9Q96Q91 983 aa9.65□□□□□ -0.86
PCNX1-213ENST00000556846 SLC52A2Q9HAB3 445 aa9.65□□□□□ -0.86
PCNX1-213ENST00000556846 WWC3Q9ULE0 1092 aa9.65□□□□□ -0.86
PCNX1-213ENST00000556846 C4BP0C0L5 1744 aa9.65□□□□□ -0.87
PCNX1-213ENST00000556846 TOGARAM1Q9Y4F4 1720 aa9.65□□□□□ -0.87
PCNX1-213ENST00000556846 KDM6AO15550 1401 aaPredicted RBP9.65□□□□□ -0.87
PCNX1-213ENST00000556846 C5P01031 1676 aa9.64□□□□□ -0.87
PCNX1-213ENST00000556846 KDRP35968 1356 aa9.64□□□□□ -0.87
PCNX1-213ENST00000556846 HOXB3P14651 431 aaPredicted RBP9.64□□□□□ -0.87
PCNX1-213ENST00000556846 YBX3P16989 372 aaKnown RBP eCLIP9.64□□□□□ -0.87
PCNX1-213ENST00000556846 FKBP8Q14318 412 aa9.64□□□□□ -0.87
PCNX1-213ENST00000556846 CNTNAP4Q9C0A0 1308 aa9.63□□□□□ -0.87
PCNX1-213ENST00000556846 QSER1Q2KHR3 1735 aa9.63□□□□□ -0.87
PCNX1-213ENST00000556846 CRKLP46109 303 aaKnown RBP9.63□□□□□ -0.87
PCNX1-213ENST00000556846 PSEN1P49768 467 aa9.63□□□□□ -0.87
PCNX1-213ENST00000556846 SLC39A6Q13433 755 aa9.63□□□□□ -0.87
PCNX1-213ENST00000556846 NUDCQ9Y266 331 aa9.63□□□□□ -0.87
PCNX1-213ENST00000556846 PARP3Q9Y6F1 533 aa9.63□□□□□ -0.87
PCNX1-213ENST00000556846 ITGB4P16144 1822 aa9.63□□□□□ -0.87
PCNX1-213ENST00000556846 NPC1L1Q9UHC9 1359 aa9.63□□□□□ -0.87
PCNX1-213ENST00000556846 DNAJC10Q8IXB1 793 aa9.62□□□□□ -0.87
PCNX1-213ENST00000556846 TTC5Q8N0Z6 440 aa9.62□□□□□ -0.87
PCNX1-213ENST00000556846 GNAT3A8MTJ3 354 aa9.61□□□□□ -0.87
PCNX1-213ENST00000556846 ZPR1O75312 459 aa9.61□□□□□ -0.87
PCNX1-213ENST00000556846 GYS1P13807 737 aa9.61□□□□□ -0.87
PCNX1-213ENST00000556846 TEFQ10587 303 aa9.61□□□□□ -0.87
PCNX1-213ENST00000556846 DPY19L2Q6NUT2 758 aa9.61□□□□□ -0.87
PCNX1-213ENST00000556846 GAS2L2Q8NHY3 880 aa9.61□□□□□ -0.87
PCNX1-213ENST00000556846 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
PCNX1-213ENST00000556846 FBXO3Q9UK99 471 aa9.61□□□□□ -0.87
PCNX1-213ENST00000556846 U2AF1L5P0DN76 240 aaPredicted RBP9.6□□□□□ -0.87
PCNX1-213ENST00000556846 HOXB1P14653 301 aaPredicted RBP9.6□□□□□ -0.87
PCNX1-213ENST00000556846 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
PCNX1-213ENST00000556846 TGFB2P61812 414 aa9.6□□□□□ -0.87
PCNX1-213ENST00000556846 U2AF1Q01081 240 aaKnown RBP eCLIP9.6□□□□□ -0.87
PCNX1-213ENST00000556846 INTS5Q6P9B9 1019 aaKnown RBP9.6□□□□□ -0.87
PCNX1-213ENST00000556846 SRP68Q9UHB9 627 aaKnown RBP9.6□□□□□ -0.87
PCNX1-213ENST00000556846 TUBGCP6Q96RT7 1819 aa9.6□□□□□ -0.87
PCNX1-213ENST00000556846 A0A0G2JLW4 131 aa9.59□□□□□ -0.87
PCNX1-213ENST00000556846 PPP2R1AP30153 589 aa9.59□□□□□ -0.87
PCNX1-213ENST00000556846 BCS1LQ9Y276 419 aa9.59□□□□□ -0.87
PCNX1-213ENST00000556846 TAF1LQ8IZX4 1826 aa9.59□□□□□ -0.88
PCNX1-213ENST00000556846 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms