RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 KIF13BQ9NQT8 1826 aa8.51□□□□□ -1.05
LGMN-213ENST00000556790 USP42Q9H9J4 1324 aaKnown RBP8.51□□□□□ -1.05
LGMN-213ENST00000556790 PLEKHG2Q9H7P9 1386 aa8.5□□□□□ -1.05
LGMN-213ENST00000556790 A1BGP04217 495 aa8.5□□□□□ -1.05
LGMN-213ENST00000556790 DPEP1P16444 411 aa8.5□□□□□ -1.05
LGMN-213ENST00000556790 CHRNA5P30532 468 aa8.5□□□□□ -1.05
LGMN-213ENST00000556790 TEFQ10587 303 aa8.5□□□□□ -1.05
LGMN-213ENST00000556790 PPP4R3CPQ6ZMV5 832 aa8.5□□□□□ -1.05
LGMN-213ENST00000556790 BICDL1Q6ZP65 573 aa8.5□□□□□ -1.05
LGMN-213ENST00000556790 CFAP53Q96M91 514 aa8.5□□□□□ -1.05
LGMN-213ENST00000556790 CD2APQ9Y5K6 639 aa8.5□□□□□ -1.05
LGMN-213ENST00000556790 SOS1Q07889 1333 aaPredicted RBP8.5□□□□□ -1.05
LGMN-213ENST00000556790 COL15A1P39059 1388 aa8.49□□□□□ -1.05
LGMN-213ENST00000556790 CARMIL3Q8ND23 1372 aa8.49□□□□□ -1.05
LGMN-213ENST00000556790 BRCA1P38398 1863 aaKnown RBP8.49□□□□□ -1.05
LGMN-213ENST00000556790 C10orf71Q711Q0 1435 aa8.49□□□□□ -1.05
LGMN-213ENST00000556790 ZNF790Q6PG37 636 aa8.49□□□□□ -1.05
LGMN-213ENST00000556790 GAS2L2Q8NHY3 880 aa8.49□□□□□ -1.05
LGMN-213ENST00000556790 TBC1D2BQ9UPU7 963 aa8.49□□□□□ -1.05
LGMN-213ENST00000556790 USP16Q9Y5T5 823 aa8.49□□□□□ -1.05
LGMN-213ENST00000556790 BTBD11A6QL63 1104 aa8.48□□□□□ -1.05
LGMN-213ENST00000556790 POLRMTO00411 1230 aaKnown RBP8.48□□□□□ -1.05
LGMN-213ENST00000556790 KCNA3P22001 575 aa8.48□□□□□ -1.05
LGMN-213ENST00000556790 TTC5Q8N0Z6 440 aa8.48□□□□□ -1.05
LGMN-213ENST00000556790 NLGN1Q8N2Q7 840 aa8.48□□□□□ -1.05
LGMN-213ENST00000556790 BCS1LQ9Y276 419 aa8.48□□□□□ -1.05
LGMN-213ENST00000556790 PARP3Q9Y6F1 533 aa8.48□□□□□ -1.05
LGMN-213ENST00000556790 CEMIPQ8WUJ3 1361 aa8.48□□□□□ -1.05
LGMN-213ENST00000556790 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
LGMN-213ENST00000556790 ATP10DQ9P241 1426 aa8.47□□□□□ -1.05
LGMN-213ENST00000556790 TM4SF1P30408 202 aa8.47□□□□□ -1.05
LGMN-213ENST00000556790 NFIXQ14938 502 aa8.47□□□□□ -1.05
LGMN-213ENST00000556790 TBC1D9BQ66K14 1250 aa8.47□□□□□ -1.05
LGMN-213ENST00000556790 CCDC146Q8IYE0 955 aa8.47□□□□□ -1.05
LGMN-213ENST00000556790 NUDCQ9Y266 331 aa8.47□□□□□ -1.05
LGMN-213ENST00000556790 RRP7AQ9Y3A4 280 aaKnown RBP8.47□□□□□ -1.05
LGMN-213ENST00000556790 CACNA1SQ13698 1873 aa8.47□□□□□ -1.05
LGMN-213ENST00000556790 ANKRD31Q8N7Z5 1873 aa8.47□□□□□ -1.05
LGMN-213ENST00000556790 ZPR1O75312 459 aa8.46□□□□□ -1.06
LGMN-213ENST00000556790 FCHSD2O94868 740 aa8.46□□□□□ -1.06
LGMN-213ENST00000556790 NGEFQ8N5V2 710 aa8.46□□□□□ -1.06
LGMN-213ENST00000556790 PLEKHF1Q96S99 279 aa8.46□□□□□ -1.06
LGMN-213ENST00000556790 NARFQ9UHQ1 456 aa8.46□□□□□ -1.06
LGMN-213ENST00000556790 SCN7AQ01118 1682 aa8.46□□□□□ -1.06
LGMN-213ENST00000556790 COL11A2P13942 1736 aaPredicted RBP8.46□□□□□ -1.06
LGMN-213ENST00000556790 FAM177BA6PVY3 158 aa8.45□□□□□ -1.06
LGMN-213ENST00000556790 GRIN3BO60391 1043 aa8.45□□□□□ -1.06
LGMN-213ENST00000556790 EIF5P55010 431 aaKnown RBP8.45□□□□□ -1.06
LGMN-213ENST00000556790 ARHGAP27Q6ZUM4 889 aa8.45□□□□□ -1.06
LGMN-213ENST00000556790 ZNF428Q96B54 188 aa8.45□□□□□ -1.06
LGMN-213ENST00000556790 FMNL2Q96PY5 1086 aa8.45□□□□□ -1.06
LGMN-213ENST00000556790 ZNF219Q9P2Y4 722 aaPredicted RBP8.45□□□□□ -1.06
LGMN-213ENST00000556790 NRXN2Q9P2S2 1712 aa8.45□□□□□ -1.06
LGMN-213ENST00000556790 BCORQ6W2J9 1755 aa8.45□□□□□ -1.06
LGMN-213ENST00000556790 KDM3BQ7LBC6 1761 aa8.45□□□□□ -1.06
LGMN-213ENST00000556790 NBPF26B4DH59 902 aa8.44□□□□□ -1.06
LGMN-213ENST00000556790 SERPINB2P05120 415 aa8.44□□□□□ -1.06
LGMN-213ENST00000556790 PRELPP51888 382 aa8.44□□□□□ -1.06
LGMN-213ENST00000556790 RASSF7Q02833 373 aa8.44□□□□□ -1.06
LGMN-213ENST00000556790 NEUROD2Q15784 382 aa8.44□□□□□ -1.06
LGMN-213ENST00000556790 NBPF10Q6P3W6 841 aaKnown RBP8.44□□□□□ -1.06
LGMN-213ENST00000556790 SLC51AQ86UW1 340 aa8.44□□□□□ -1.06
LGMN-213ENST00000556790 VSIG10Q8N0Z9 540 aa8.44□□□□□ -1.06
LGMN-213ENST00000556790 NBPF15Q8N660 670 aa8.44□□□□□ -1.06
LGMN-213ENST00000556790 RTF1Q92541 710 aaKnown RBP8.44□□□□□ -1.06
LGMN-213ENST00000556790 ARFGEF1Q9Y6D6 1849 aa8.43□□□□□ -1.06
LGMN-213ENST00000556790 CAMTA2O94983 1202 aa8.43□□□□□ -1.06
LGMN-213ENST00000556790 STARD3NLO95772 234 aa8.43□□□□□ -1.06
LGMN-213ENST00000556790 TGFB2P61812 414 aa8.43□□□□□ -1.06
LGMN-213ENST00000556790 CCDC184Q52MB2 194 aa8.43□□□□□ -1.06
LGMN-213ENST00000556790 NECTIN2Q92692 538 aa8.43□□□□□ -1.06
LGMN-213ENST00000556790 ADCY9O60503 1353 aa8.43□□□□□ -1.06
LGMN-213ENST00000556790 CCDC88AQ3V6T2 1871 aa8.43□□□□□ -1.06
LGMN-213ENST00000556790 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
LGMN-213ENST00000556790 ANXA1P04083 346 aa8.42□□□□□ -1.06
LGMN-213ENST00000556790 C1QTNF8P60827 252 aa8.42□□□□□ -1.06
LGMN-213ENST00000556790 NFE2L2Q16236 605 aa8.42□□□□□ -1.06
LGMN-213ENST00000556790 HLFQ16534 295 aa8.42□□□□□ -1.06
LGMN-213ENST00000556790 KRT24Q2M2I5 525 aa8.42□□□□□ -1.06
LGMN-213ENST00000556790 DZIP3Q86Y13 1208 aaKnown RBP8.42□□□□□ -1.06
LGMN-213ENST00000556790 LAMB4A4D0S4 1761 aa8.42□□□□□ -1.06
LGMN-213ENST00000556790 DLEC1Q9Y238 1755 aa8.42□□□□□ -1.06
LGMN-213ENST00000556790 SBF1O95248 1867 aa8.42□□□□□ -1.06
LGMN-213ENST00000556790 MYL6BP14649 208 aa8.41□□□□□ -1.06
LGMN-213ENST00000556790 HMGB2P26583 209 aaKnown RBP8.41□□□□□ -1.06
LGMN-213ENST00000556790 RIPK4P57078 832 aa8.41□□□□□ -1.06
LGMN-213ENST00000556790 TAF7Q15545 349 aaPredicted RBP8.41□□□□□ -1.06
LGMN-213ENST00000556790 PRR5LQ6MZQ0 368 aa8.41□□□□□ -1.06
LGMN-213ENST00000556790 TTLL7Q6ZT98 887 aa8.41□□□□□ -1.06
LGMN-213ENST00000556790 C2CD5Q86YS7 1000 aa8.41□□□□□ -1.06
LGMN-213ENST00000556790 PIM2Q9P1W9 311 aa8.41□□□□□ -1.06
LGMN-213ENST00000556790 TNRC6CQ9HCJ0 1690 aaKnown RBP8.4□□□□□ -1.06
LGMN-213ENST00000556790 PCNTO95613 3336 aa8.4□□□□□ -1.06
LGMN-213ENST00000556790 MAPK8IP3Q9UPT6 1336 aa8.4□□□□□ -1.06
LGMN-213ENST00000556790 SNRPA1P09661 255 aaKnown RBP8.4□□□□□ -1.06
LGMN-213ENST00000556790 IL6STP40189 918 aaPredicted RBP8.4□□□□□ -1.06
LGMN-213ENST00000556790 EIF4A1P60842 406 aaKnown RBP8.4□□□□□ -1.06
LGMN-213ENST00000556790 PROSER3Q2NL68 480 aa8.4□□□□□ -1.06
LGMN-213ENST00000556790 DALRD3Q5D0E6 543 aaKnown RBP8.4□□□□□ -1.06
LGMN-213ENST00000556790 C9orf131Q5VYM1 1079 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms