RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 DNMT3AQ9Y6K1 912 aaPredicted RBP8.27□□□□□ -1.09
PRPF39-211ENST00000556782 EFCAB6Q5THR3 1501 aa8.27□□□□□ -1.09
PRPF39-211ENST00000556782 ANKRD50Q9ULJ7 1429 aa8.27□□□□□ -1.09
PRPF39-211ENST00000556782 MED14O60244 1454 aa8.26□□□□□ -1.09
PRPF39-211ENST00000556782 UBR1Q8IWV7 1749 aa8.26□□□□□ -1.09
PRPF39-211ENST00000556782 EMILIN1Q9Y6C2 1016 aa8.26□□□□□ -1.09
PRPF39-211ENST00000556782 ROCK1Q13464 1354 aa8.25□□□□□ -1.09
PRPF39-211ENST00000556782 FSHRP23945 695 aa8.25□□□□□ -1.09
PRPF39-211ENST00000556782 IRS1P35568 1242 aa8.25□□□□□ -1.09
PRPF39-211ENST00000556782 RSBN1LQ6PCB5 846 aaPredicted RBP8.25□□□□□ -1.09
PRPF39-211ENST00000556782 VASH1Q7L8A9 365 aaPredicted RBP8.25□□□□□ -1.09
PRPF39-211ENST00000556782 ANKLE2Q86XL3 938 aa8.25□□□□□ -1.09
PRPF39-211ENST00000556782 ARMC2Q8NEN0 867 aa8.25□□□□□ -1.09
PRPF39-211ENST00000556782 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
PRPF39-211ENST00000556782 ZBTB3Q9H5J0 574 aa8.25□□□□□ -1.09
PRPF39-211ENST00000556782 PCDHB15Q9Y5E8 787 aa8.25□□□□□ -1.09
PRPF39-211ENST00000556782 NPHP4O75161 1426 aaPredicted RBP8.25□□□□□ -1.09
PRPF39-211ENST00000556782 UNC13BO14795 1591 aa8.25□□□□□ -1.09
PRPF39-211ENST00000556782 PIK3C2BO00750 1634 aa8.25□□□□□ -1.09
PRPF39-211ENST00000556782 IQGAP1P46940 1657 aa8.24□□□□□ -1.09
PRPF39-211ENST00000556782 SLIT1O75093 1534 aa8.24□□□□□ -1.09
PRPF39-211ENST00000556782 SYNMO15061 1565 aa8.24□□□□□ -1.09
PRPF39-211ENST00000556782 FIGNL2A6NMB9 653 aa8.24□□□□□ -1.09
PRPF39-211ENST00000556782 HRCP23327 699 aa8.24□□□□□ -1.09
PRPF39-211ENST00000556782 MARSP56192 900 aaKnown RBP8.24□□□□□ -1.09
PRPF39-211ENST00000556782 PPARGC1BQ86YN6 1023 aaKnown RBP8.24□□□□□ -1.09
PRPF39-211ENST00000556782 CCDC155Q8N6L0 562 aa8.24□□□□□ -1.09
PRPF39-211ENST00000556782 MAP4K5Q9Y4K4 846 aa8.24□□□□□ -1.09
PRPF39-211ENST00000556782 ARHGAP23Q9P227 1491 aa8.24□□□□□ -1.09
PRPF39-211ENST00000556782 CPS1P31327 1500 aa8.24□□□□□ -1.09
PRPF39-211ENST00000556782 NOS1P29475 1434 aa8.23□□□□□ -1.09
PRPF39-211ENST00000556782 FOXK2Q01167 660 aa8.23□□□□□ -1.09
PRPF39-211ENST00000556782 RNFT1Q5M7Z0 435 aa8.23□□□□□ -1.09
PRPF39-211ENST00000556782 KANK3Q6NY19 840 aa8.23□□□□□ -1.09
PRPF39-211ENST00000556782 CCDC116Q8IYX3 515 aa8.23□□□□□ -1.09
PRPF39-211ENST00000556782 RPRD2Q5VT52 1461 aaKnown RBP8.23□□□□□ -1.09
PRPF39-211ENST00000556782 SCAF11Q99590 1463 aaKnown RBP8.23□□□□□ -1.09
PRPF39-211ENST00000556782 TET3O43151 1660 aa8.23□□□□□ -1.09
PRPF39-211ENST00000556782 KDM5AP29375 1690 aaKnown RBP8.23□□□□□ -1.09
PRPF39-211ENST00000556782 SLURP2P0DP57 97 aa8.22□□□□□ -1.09
PRPF39-211ENST00000556782 C1QTNF2Q9BXJ5 285 aa8.22□□□□□ -1.09
PRPF39-211ENST00000556782 ADGRB3O60242 1522 aa8.22□□□□□ -1.09
PRPF39-211ENST00000556782 RRBP1Q9P2E9 1410 aaKnown RBP8.21□□□□□ -1.09
PRPF39-211ENST00000556782 GCC2Q8IWJ2 1684 aa8.21□□□□□ -1.09
PRPF39-211ENST00000556782 ARHGEF15O94989 841 aa8.21□□□□□ -1.1
PRPF39-211ENST00000556782 TUSC1Q2TAM9 212 aa8.21□□□□□ -1.1
PRPF39-211ENST00000556782 PRPF38BQ5VTL8 546 aaKnown RBP8.21□□□□□ -1.1
PRPF39-211ENST00000556782 WHAMMQ8TF30 809 aa8.21□□□□□ -1.1
PRPF39-211ENST00000556782 SCARF2Q96GP6 870 aaPredicted RBP8.21□□□□□ -1.1
PRPF39-211ENST00000556782 IQGAP3Q86VI3 1631 aa8.21□□□□□ -1.1
PRPF39-211ENST00000556782 TMEM2Q9UHN6 1383 aa8.21□□□□□ -1.1
PRPF39-211ENST00000556782 PER1O15534 1290 aaPredicted RBP8.2□□□□□ -1.1
PRPF39-211ENST00000556782 LTKP29376 864 aa8.2□□□□□ -1.1
PRPF39-211ENST00000556782 PDE4DQ08499 809 aa8.2□□□□□ -1.1
PRPF39-211ENST00000556782 IDI1Q13907 227 aa8.2□□□□□ -1.1
PRPF39-211ENST00000556782 NBPF14Q5TI25 921 aa8.2□□□□□ -1.1
PRPF39-211ENST00000556782 SV2AQ7L0J3 742 aa8.2□□□□□ -1.1
PRPF39-211ENST00000556782 SH3RF1Q7Z6J0 888 aa8.2□□□□□ -1.1
PRPF39-211ENST00000556782 TRMT44Q8IYL2 757 aaKnown RBP8.2□□□□□ -1.1
PRPF39-211ENST00000556782 VWA5B2Q8N398 1253 aa8.2□□□□□ -1.1
PRPF39-211ENST00000556782 CFAP65Q6ZU64 1925 aaKnown RBP8.2□□□□□ -1.1
PRPF39-211ENST00000556782 CDC14CA4D256 554 aa8.19□□□□□ -1.1
PRPF39-211ENST00000556782 SLC35F4A4IF30 521 aa8.19□□□□□ -1.1
PRPF39-211ENST00000556782 UBAP1LF5GYI3 381 aa8.19□□□□□ -1.1
PRPF39-211ENST00000556782 ITGAEP38570 1179 aa8.19□□□□□ -1.1
PRPF39-211ENST00000556782 TXNDC2Q86VQ3 553 aa8.19□□□□□ -1.1
PRPF39-211ENST00000556782 SLC52A1Q9NWF4 448 aa8.19□□□□□ -1.1
PRPF39-211ENST00000556782 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
PRPF39-211ENST00000556782 E9PCH4 1651 aa8.18□□□□□ -1.1
PRPF39-211ENST00000556782 STRCP1A6NGW2 1772 aa8.18□□□□□ -1.1
PRPF39-211ENST00000556782 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
PRPF39-211ENST00000556782 SPINT1O43278 529 aa8.18□□□□□ -1.1
PRPF39-211ENST00000556782 ITGA6P23229 1130 aa8.18□□□□□ -1.1
PRPF39-211ENST00000556782 RIC3Q7Z5B4 369 aa8.18□□□□□ -1.1
PRPF39-211ENST00000556782 TSC1Q92574 1164 aa8.18□□□□□ -1.1
PRPF39-211ENST00000556782 EID1Q9Y6B2 187 aa8.18□□□□□ -1.1
PRPF39-211ENST00000556782 CBLBQ13191 982 aa8.17□□□□□ -1.1
PRPF39-211ENST00000556782 PPP1R26Q5T8A7 1209 aaPredicted RBP8.17□□□□□ -1.1
PRPF39-211ENST00000556782 Q6ZVU0 165 aa8.17□□□□□ -1.1
PRPF39-211ENST00000556782 SH3BP5LQ7L8J4 393 aa8.17□□□□□ -1.1
PRPF39-211ENST00000556782 CABLES1Q8TDN4 633 aa8.17□□□□□ -1.1
PRPF39-211ENST00000556782 NUP155O75694 1391 aa8.17□□□□□ -1.1
PRPF39-211ENST00000556782 LRRC7Q96NW7 1537 aa8.17□□□□□ -1.1
PRPF39-211ENST00000556782 TMEM131LA2VDJ0 1609 aa8.17□□□□□ -1.1
PRPF39-211ENST00000556782 ZFYVE9O95405 1425 aa8.16□□□□□ -1.1
PRPF39-211ENST00000556782 CSPP1Q1MSJ5 1256 aa8.16□□□□□ -1.1
PRPF39-211ENST00000556782 SLC24A3Q9HC58 644 aa8.16□□□□□ -1.1
PRPF39-211ENST00000556782 ALKQ9UM73 1620 aa8.16□□□□□ -1.1
PRPF39-211ENST00000556782 NAIPQ13075 1403 aa8.15□□□□□ -1.1
PRPF39-211ENST00000556782 RIMS2Q9UQ26 1411 aa8.14□□□□□ -1.11
PRPF39-211ENST00000556782 NUTM2BA6NNL0 878 aaPredicted RBP8.14□□□□□ -1.11
PRPF39-211ENST00000556782 NUTM2EB1AL46 878 aaPredicted RBP8.14□□□□□ -1.11
PRPF39-211ENST00000556782 TOM1O60784 492 aa8.14□□□□□ -1.11
PRPF39-211ENST00000556782 MAP3K10Q02779 954 aa8.14□□□□□ -1.11
PRPF39-211ENST00000556782 NUTM2DQ5VT03 806 aaPredicted RBP8.14□□□□□ -1.11
PRPF39-211ENST00000556782 MYSM1Q5VVJ2 828 aa8.14□□□□□ -1.11
PRPF39-211ENST00000556782 NUTM2AQ8IVF1 878 aaPredicted RBP8.14□□□□□ -1.11
PRPF39-211ENST00000556782 CARD14Q9BXL6 1004 aa8.14□□□□□ -1.11
PRPF39-211ENST00000556782 NWD1Q149M9 1564 aa8.14□□□□□ -1.11
PRPF39-211ENST00000556782 HFM1A2PYH4 1435 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms