RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 CYP19A1P11511 503 aaPredicted RBP13.86□□□□□ -0.19
MTHFD1-214ENST00000556771 CCDC87Q9NVE4 849 aa13.86□□□□□ -0.19
MTHFD1-214ENST00000556771 COL24A1Q17RW2 1714 aa13.86□□□□□ -0.19
MTHFD1-214ENST00000556771 KDM3BQ7LBC6 1761 aa13.86□□□□□ -0.19
MTHFD1-214ENST00000556771 MYH14Q7Z406 1995 aaKnown RBP13.85□□□□□ -0.19
MTHFD1-214ENST00000556771 PHF14O94880 888 aa13.85□□□□□ -0.19
MTHFD1-214ENST00000556771 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-214ENST00000556771 PPP1R1BQ9UD71 204 aaPredicted RBP13.85□□□□□ -0.19
MTHFD1-214ENST00000556771 SRCAPQ6ZRS2 3230 aa13.85□□□□□ -0.19
MTHFD1-214ENST00000556771 APAF1O14727 1248 aa13.84□□□□□ -0.19
MTHFD1-214ENST00000556771 SNRPA1P09661 255 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-214ENST00000556771 POLD1P28340 1107 aa13.84□□□□□ -0.19
MTHFD1-214ENST00000556771 PTGER2P43116 358 aa13.84□□□□□ -0.19
MTHFD1-214ENST00000556771 CALD1Q05682 793 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-214ENST00000556771 NEUROD2Q15784 382 aa13.84□□□□□ -0.19
MTHFD1-214ENST00000556771 TRAPPC3LQ5T215 181 aa13.84□□□□□ -0.19
MTHFD1-214ENST00000556771 INTS5Q6P9B9 1019 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-214ENST00000556771 SGIP1Q9BQI5 828 aa13.84□□□□□ -0.19
MTHFD1-214ENST00000556771 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
MTHFD1-214ENST00000556771 AMIGO3Q86WK7 504 aa13.83□□□□□ -0.2
MTHFD1-214ENST00000556771 THUMPD2Q9BTF0 503 aaKnown RBP13.83□□□□□ -0.2
MTHFD1-214ENST00000556771 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
MTHFD1-214ENST00000556771 KCNQ3O43525 872 aa13.82□□□□□ -0.2
MTHFD1-214ENST00000556771 TSPYL4Q9UJ04 414 aa13.82□□□□□ -0.2
MTHFD1-214ENST00000556771 SOS1Q07889 1333 aaPredicted RBP13.82□□□□□ -0.2
MTHFD1-214ENST00000556771 RFC4P35249 363 aa13.81□□□□□ -0.2
MTHFD1-214ENST00000556771 FKBP8Q14318 412 aa13.81□□□□□ -0.2
MTHFD1-214ENST00000556771 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-214ENST00000556771 ARXQ96QS3 562 aa13.81□□□□□ -0.2
MTHFD1-214ENST00000556771 C4AP0C0L4 1744 aa13.81□□□□□ -0.2
MTHFD1-214ENST00000556771 A0A087WZG4 1122 aa13.8□□□□□ -0.2
MTHFD1-214ENST00000556771 CCER2I3L3R5 266 aa13.8□□□□□ -0.2
MTHFD1-214ENST00000556771 EIF4A1P60842 406 aaKnown RBP13.8□□□□□ -0.2
MTHFD1-214ENST00000556771 CCDC27Q2M243 656 aa13.8□□□□□ -0.2
MTHFD1-214ENST00000556771 NLGN1Q8N2Q7 840 aa13.8□□□□□ -0.2
MTHFD1-214ENST00000556771 NGEFQ8N5V2 710 aa13.8□□□□□ -0.2
MTHFD1-214ENST00000556771 MIS18AQ9NYP9 233 aa13.8□□□□□ -0.2
MTHFD1-214ENST00000556771 ZBTB1Q9Y2K1 713 aa13.8□□□□□ -0.2
MTHFD1-214ENST00000556771 LAMB4A4D0S4 1761 aa13.8□□□□□ -0.2
MTHFD1-214ENST00000556771 COL15A1P39059 1388 aa13.8□□□□□ -0.2
MTHFD1-214ENST00000556771 CHL1O00533 1208 aa13.79□□□□□ -0.2
MTHFD1-214ENST00000556771 IL6STP40189 918 aaPredicted RBP13.79□□□□□ -0.2
MTHFD1-214ENST00000556771 NPM2Q86SE8 214 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-214ENST00000556771 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
MTHFD1-214ENST00000556771 GIGYF1O75420 1035 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1-214ENST00000556771 CANXP27824 592 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-214ENST00000556771 EIF5P55010 431 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-214ENST00000556771 DIEXFQ68CQ4 756 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-214ENST00000556771 MSL1Q68DK7 614 aa13.78□□□□□ -0.2
MTHFD1-214ENST00000556771 SMIM5Q71RC9 77 aa13.78□□□□□ -0.2
MTHFD1-214ENST00000556771 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
MTHFD1-214ENST00000556771 USP16Q9Y5T5 823 aa13.78□□□□□ -0.2
MTHFD1-214ENST00000556771 USP42Q9H9J4 1324 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-214ENST00000556771 ZPR1O75312 459 aa13.77□□□□□ -0.21
MTHFD1-214ENST00000556771 GYS1P13807 737 aa13.77□□□□□ -0.21
MTHFD1-214ENST00000556771 FAM9BQ8IZU0 186 aa13.77□□□□□ -0.21
MTHFD1-214ENST00000556771 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
MTHFD1-214ENST00000556771 ERBB4Q15303 1308 aa13.76□□□□□ -0.21
MTHFD1-214ENST00000556771 A1BGP04217 495 aa13.76□□□□□ -0.21
MTHFD1-214ENST00000556771 GNAI1P63096 354 aa13.76□□□□□ -0.21
MTHFD1-214ENST00000556771 NARFQ9UHQ1 456 aa13.76□□□□□ -0.21
MTHFD1-214ENST00000556771 IL16Q14005 1332 aa13.75□□□□□ -0.21
MTHFD1-214ENST00000556771 PRAMEF22A3QJZ6 481 aa13.75□□□□□ -0.21
MTHFD1-214ENST00000556771 HOXB7P09629 217 aa13.75□□□□□ -0.21
MTHFD1-214ENST00000556771 ZNF853P0CG23 659 aa13.75□□□□□ -0.21
MTHFD1-214ENST00000556771 WWC1Q8IX03 1113 aa13.75□□□□□ -0.21
MTHFD1-214ENST00000556771 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
MTHFD1-214ENST00000556771 RGL2O15211 777 aa13.74□□□□□ -0.21
MTHFD1-214ENST00000556771 MMP10P09238 476 aa13.74□□□□□ -0.21
MTHFD1-214ENST00000556771 FHDC1Q9C0D6 1143 aaPredicted RBP13.74□□□□□ -0.21
MTHFD1-214ENST00000556771 SCN7AQ01118 1682 aa13.73□□□□□ -0.21
MTHFD1-214ENST00000556771 IFFO2Q5TF58 517 aa13.73□□□□□ -0.21
MTHFD1-214ENST00000556771 SYT17Q9BSW7 474 aa13.73□□□□□ -0.21
MTHFD1-214ENST00000556771 CHMP4AQ9BY43 222 aa13.73□□□□□ -0.21
MTHFD1-214ENST00000556771 SRP68Q9UHB9 627 aaKnown RBP13.73□□□□□ -0.21
MTHFD1-214ENST00000556771 ZNF330Q9Y3S2 320 aaPredicted RBP13.73□□□□□ -0.21
MTHFD1-214ENST00000556771 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
MTHFD1-214ENST00000556771 PARP3Q9Y6F1 533 aa13.73□□□□□ -0.21
MTHFD1-214ENST00000556771 USPL1Q5W0Q7 1092 aa13.72□□□□□ -0.21
MTHFD1-214ENST00000556771 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
MTHFD1-214ENST00000556771 WDR63Q8IWG1 891 aa13.72□□□□□ -0.21
MTHFD1-214ENST00000556771 MBIPQ9NS73 344 aa13.72□□□□□ -0.21
MTHFD1-214ENST00000556771 NBPF26B4DH59 902 aa13.71□□□□□ -0.21
MTHFD1-214ENST00000556771 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
MTHFD1-214ENST00000556771 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.21
MTHFD1-214ENST00000556771 NBPF15Q8N660 670 aa13.71□□□□□ -0.21
MTHFD1-214ENST00000556771 ZNF652Q9Y2D9 606 aa13.71□□□□□ -0.21
MTHFD1-214ENST00000556771 TM4SF1P30408 202 aa13.7□□□□□ -0.22
MTHFD1-214ENST00000556771 CLEC4GQ6UXB4 293 aa13.7□□□□□ -0.22
MTHFD1-214ENST00000556771 BCORQ6W2J9 1755 aa13.7□□□□□ -0.22
MTHFD1-214ENST00000556771 CAMTA2O94983 1202 aa13.69□□□□□ -0.22
MTHFD1-214ENST00000556771 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
MTHFD1-214ENST00000556771 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
MTHFD1-214ENST00000556771 TBC1D2BQ9UPU7 963 aa13.69□□□□□ -0.22
MTHFD1-214ENST00000556771 C10orf71Q711Q0 1435 aa13.68□□□□□ -0.22
MTHFD1-214ENST00000556771 EIF2S2P20042 333 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-214ENST00000556771 PIP4K2AP48426 406 aaPredicted RBP13.68□□□□□ -0.22
MTHFD1-214ENST00000556771 NFIXQ14938 502 aa13.68□□□□□ -0.22
MTHFD1-214ENST00000556771 DUSP27Q5VZP5 1158 aa13.68□□□□□ -0.22
MTHFD1-214ENST00000556771 KIF13BQ9NQT8 1826 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms