RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 DNMT3AQ9Y6K1 912 aaPredicted RBP6.6□□□□□ -1.35
GPHN-214ENST00000556633 H3BRB1 525 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 GFRA3O60609 400 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 NOS2P35228 1153 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 RNF144AP50876 292 aaPredicted RBP6.59□□□□□ -1.35
GPHN-214ENST00000556633 MTMR3Q13615 1198 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 TEAD4Q15561 434 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 CCDC27Q2M243 656 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 PKDCCQ504Y2 493 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 GNASQ5JWF2 1037 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 SH3PXD2AQ5TCZ1 1133 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 ZNF295-AS1Q8N0V1 137 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 RHBDD1Q8TEB9 315 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 ZDHHC1Q8WTX9 485 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 NIFKQ9BYG3 293 aaKnown RBP6.59□□□□□ -1.35
GPHN-214ENST00000556633 GRIP2Q9C0E4 1043 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 TUT1Q9H6E5 874 aaKnown RBP6.59□□□□□ -1.35
GPHN-214ENST00000556633 BIN2Q9UBW5 565 aaPredicted RBP6.59□□□□□ -1.35
GPHN-214ENST00000556633 PARP3Q9Y6F1 533 aa6.59□□□□□ -1.35
GPHN-214ENST00000556633 EML1O00423 815 aa6.58□□□□□ -1.36
GPHN-214ENST00000556633 ICMTO60725 284 aa6.58□□□□□ -1.36
GPHN-214ENST00000556633 BMP1P13497 986 aa6.58□□□□□ -1.36
GPHN-214ENST00000556633 FOXD4L5Q5VV16 416 aaPredicted RBP6.58□□□□□ -1.36
GPHN-214ENST00000556633 C16orf46Q6P387 395 aa6.58□□□□□ -1.36
GPHN-214ENST00000556633 GLYCTKQ8IVS8 523 aa6.58□□□□□ -1.36
GPHN-214ENST00000556633 HELQQ8TDG4 1101 aa6.58□□□□□ -1.36
GPHN-214ENST00000556633 L3MBTL2Q969R5 705 aa6.58□□□□□ -1.36
GPHN-214ENST00000556633 NGLY1Q96IV0 654 aa6.58□□□□□ -1.36
GPHN-214ENST00000556633 NRG2O14511 850 aaPredicted RBP6.57□□□□□ -1.36
GPHN-214ENST00000556633 DGAT1O75907 488 aa6.57□□□□□ -1.36
GPHN-214ENST00000556633 PLA2G4AP47712 749 aa6.57□□□□□ -1.36
GPHN-214ENST00000556633 HIRAP54198 1017 aaPredicted RBP6.57□□□□□ -1.36
GPHN-214ENST00000556633 FKBP4Q02790 459 aaKnown RBP eCLIP6.57□□□□□ -1.36
GPHN-214ENST00000556633 SF3B2Q13435 895 aaKnown RBP6.57□□□□□ -1.36
GPHN-214ENST00000556633 SCARF1Q14162 830 aa6.57□□□□□ -1.36
GPHN-214ENST00000556633 CTC1Q2NKJ3 1217 aa6.57□□□□□ -1.36
GPHN-214ENST00000556633 POTEAQ6S8J7 498 aa6.57□□□□□ -1.36
GPHN-214ENST00000556633 SAP130Q9H0E3 1048 aa6.57□□□□□ -1.36
GPHN-214ENST00000556633 HCN4Q9Y3Q4 1203 aa6.57□□□□□ -1.36
GPHN-214ENST00000556633 PHKA2P46019 1235 aa6.56□□□□□ -1.36
GPHN-214ENST00000556633 C4orf17Q53FE4 359 aa6.56□□□□□ -1.36
GPHN-214ENST00000556633 COX20Q5RI15 118 aa6.56□□□□□ -1.36
GPHN-214ENST00000556633 PRICKLE2Q7Z3G6 844 aa6.56□□□□□ -1.36
GPHN-214ENST00000556633 ALDH16A1Q8IZ83 802 aa6.56□□□□□ -1.36
GPHN-214ENST00000556633 RNF217Q8TC41 542 aa6.56□□□□□ -1.36
GPHN-214ENST00000556633 QTRT2Q9H974 415 aaKnown RBP6.56□□□□□ -1.36
GPHN-214ENST00000556633 AXIN1O15169 862 aa6.55□□□□□ -1.36
GPHN-214ENST00000556633 SMCPP49901 116 aaPredicted RBP6.55□□□□□ -1.36
GPHN-214ENST00000556633 TRIM46Q7Z4K8 759 aa6.55□□□□□ -1.36
GPHN-214ENST00000556633 PHACTR1Q9C0D0 580 aa6.55□□□□□ -1.36
GPHN-214ENST00000556633 TTLL8A6PVC2 850 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 SPATA31C2B4DYI2 1134 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 TXLNAP40222 546 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 POU4F2Q12837 409 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 RTN1Q16799 776 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 NBPF10Q6P3W6 841 aaKnown RBP6.54□□□□□ -1.36
GPHN-214ENST00000556633 LYSMD3Q7Z3D4 306 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 CRIPAKQ8N1N5 446 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 RGS22Q8NE09 1264 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 AIDAQ96BJ3 306 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 MYO19Q96H55 970 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 LRFN2Q9ULH4 789 aa6.54□□□□□ -1.36
GPHN-214ENST00000556633 FIGNL2A6NMB9 653 aa6.53□□□□□ -1.36
GPHN-214ENST00000556633 TNFRSF10BO14763 440 aa6.53□□□□□ -1.36
GPHN-214ENST00000556633 FAM13AO94988 1023 aa6.53□□□□□ -1.36
GPHN-214ENST00000556633 MPSTP25325 297 aa6.53□□□□□ -1.36
GPHN-214ENST00000556633 MARSP56192 900 aaKnown RBP6.53□□□□□ -1.36
GPHN-214ENST00000556633 LAPTM4AQ15012 233 aa6.53□□□□□ -1.36
GPHN-214ENST00000556633 ECM1Q16610 540 aa6.53□□□□□ -1.36
GPHN-214ENST00000556633 NBPF1Q3BBV0 1214 aa6.53□□□□□ -1.36
GPHN-214ENST00000556633 ZFP42Q96MM3 310 aa6.53□□□□□ -1.36
GPHN-214ENST00000556633 STIM2Q9P246 746 aa6.53□□□□□ -1.36
GPHN-214ENST00000556633 SOS2Q07890 1332 aaPredicted RBP6.52□□□□□ -1.37
GPHN-214ENST00000556633 ST8SIA5O15466 376 aa6.52□□□□□ -1.37
GPHN-214ENST00000556633 RHOQP17081 205 aa6.52□□□□□ -1.37
GPHN-214ENST00000556633 ARHGAP4P98171 946 aa6.52□□□□□ -1.37
GPHN-214ENST00000556633 DGKZQ13574 1117 aa6.52□□□□□ -1.37
GPHN-214ENST00000556633 C1orf53Q5VUE5 145 aa6.52□□□□□ -1.37
GPHN-214ENST00000556633 KLK14Q9P0G3 267 aa6.52□□□□□ -1.37
GPHN-214ENST00000556633 NPR3P17342 541 aa6.51□□□□□ -1.37
GPHN-214ENST00000556633 BRD2P25440 801 aaKnown RBP6.51□□□□□ -1.37
GPHN-214ENST00000556633 C11orf91Q3C1V1 193 aa6.51□□□□□ -1.37
GPHN-214ENST00000556633 WDR44Q5JSH3 913 aa6.51□□□□□ -1.37
GPHN-214ENST00000556633 RHPN1Q8TCX5 695 aa6.51□□□□□ -1.37
GPHN-214ENST00000556633 AAASQ9NRG9 546 aa6.51□□□□□ -1.37
GPHN-214ENST00000556633 ZDHHC3Q9NYG2 299 aa6.51□□□□□ -1.37
GPHN-214ENST00000556633 TATP17735 454 aaPredicted RBP6.5□□□□□ -1.37
GPHN-214ENST00000556633 MAPK1P28482 360 aa6.5□□□□□ -1.37
GPHN-214ENST00000556633 NOM1Q5C9Z4 860 aaKnown RBP6.5□□□□□ -1.37
GPHN-214ENST00000556633 FAM26DQ5JW98 314 aa6.5□□□□□ -1.37
GPHN-214ENST00000556633 ABTB2Q8N961 1025 aa6.5□□□□□ -1.37
GPHN-214ENST00000556633 FOXD4L4Q8WXT5 416 aaPredicted RBP6.5□□□□□ -1.37
GPHN-214ENST00000556633 TIMMDC1Q9NPL8 285 aa6.5□□□□□ -1.37
GPHN-214ENST00000556633 ATP13A2Q9NQ11 1180 aa6.5□□□□□ -1.37
GPHN-214ENST00000556633 DNMT3LQ9UJW3 386 aa6.5□□□□□ -1.37
GPHN-214ENST00000556633 A0A1B0GTH6 734 aa6.49□□□□□ -1.37
GPHN-214ENST00000556633 ATP4AP20648 1035 aa6.49□□□□□ -1.37
GPHN-214ENST00000556633 EIF1AXP47813 144 aaKnown RBP6.49□□□□□ -1.37
GPHN-214ENST00000556633 AAMPQ13685 434 aa6.49□□□□□ -1.37
GPHN-214ENST00000556633 ALKBH2Q6NS38 261 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms