RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 RAB34Q9BZG1 259 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 LRSAM1Q6UWE0 723 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 SRRTQ9BXP5 876 aaKnown RBP12.51□□□□□ -0.41
SPTB-208ENST00000556626 FAM135AQ9P2D6 1515 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 FERMT3Q86UX7 667 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 LIMCH1Q9UPQ0 1083 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 CAPN2P17655 700 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 DNA2P51530 1060 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 SSFA2P28290 1259 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 FAM114A1Q8IWE2 563 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 STMN4Q9H169 189 aaPredicted RBP12.51□□□□□ -0.41
SPTB-208ENST00000556626 IKBKGQ9Y6K9 419 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
SPTB-208ENST00000556626 MCM6Q14566 821 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 HS1BP3Q53T59 392 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 TMX1Q9H3N1 280 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 IFI16Q16666 785 aaKnown RBP12.5□□□□□ -0.41
SPTB-208ENST00000556626 TMEM57Q8N5G2 664 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 GNG11P61952 73 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 PIP4K2BP78356 416 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
SPTB-208ENST00000556626 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
SPTB-208ENST00000556626 KIAA1107Q9UPP5 1409 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 HOMEZQ8IX15 550 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 FBF1Q8TES7 1133 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 SREK1Q8WXA9 508 aaKnown RBP12.5□□□□□ -0.41
SPTB-208ENST00000556626 MACROD2A1Z1Q3 448 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 STX6O43752 255 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 GLRX3O76003 335 aaKnown RBP12.5□□□□□ -0.41
SPTB-208ENST00000556626 CCDC6Q16204 474 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 CCDC155Q8N6L0 562 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 GAPVD1Q14C86 1478 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 KIF4AO95239 1232 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 RPAP2Q8IXW5 612 aaPredicted RBP12.5□□□□□ -0.41
SPTB-208ENST00000556626 WDR66Q8TBY9 1149 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 EBAG9O00559 213 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 TUBB4AP04350 444 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 RSRC1Q96IZ7 334 aaKnown RBP12.5□□□□□ -0.41
SPTB-208ENST00000556626 HYPKQ9NX55 129 aa12.5□□□□□ -0.41
SPTB-208ENST00000556626 A0A1W2PRG0 241 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 CEP57Q86XR8 500 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 MPHOSPH8Q99549 860 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 DDX23Q9BUQ8 820 aaKnown RBP12.49□□□□□ -0.41
SPTB-208ENST00000556626 ZNF287Q9HBT7 754 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 CFTRP13569 1480 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 LRPPRCP42704 1394 aaKnown RBP12.49□□□□□ -0.41
SPTB-208ENST00000556626 ZNF76P36508 570 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 KANK3Q6NY19 840 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 CCDC97Q96F63 343 aaPredicted RBP12.49□□□□□ -0.41
SPTB-208ENST00000556626 OPA1O60313 960 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 BAG4O95429 457 aaKnown RBP12.49□□□□□ -0.41
SPTB-208ENST00000556626 NOLC1Q14978 699 aaKnown RBP eCLIP12.49□□□□□ -0.412e-7■■■■□ 25.5
SPTB-208ENST00000556626 KIF1BPQ96EK5 621 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 CTNNA2P26232 953 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 PYM1Q9BRP8 204 aaKnown RBP12.49□□□□□ -0.41
SPTB-208ENST00000556626 DDX46Q7L014 1031 aaKnown RBP12.49□□□□□ -0.41
SPTB-208ENST00000556626 CCDC160A6NGH7 325 aa12.49□□□□□ -0.41
SPTB-208ENST00000556626 V9GYY5 206 aaPredicted RBP12.49□□□□□ -0.41
SPTB-208ENST00000556626 GPRASP1Q5JY77 1395 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 ITSN2Q9NZM3 1697 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 FERP16591 822 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 CCDC121Q6ZUS5 278 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 MICALL1Q8N3F8 863 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 FSIP1Q8NA03 581 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 CEP83Q9Y592 693 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 AIDAQ96BJ3 306 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 GBP6Q6ZN66 633 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 NLRP2Q9NX02 1062 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 LIG1P18858 919 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 ABTB2Q8N961 1025 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 CTAGE1Q96RT6 745 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 RASSF4Q9H2L5 321 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 HOMER2Q9NSB8 354 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 CETN1Q12798 172 aa12.48□□□□□ -0.41
SPTB-208ENST00000556626 GOLGA1Q92805 767 aa12.47□□□□□ -0.41
SPTB-208ENST00000556626 GOLIM4O00461 696 aa12.47□□□□□ -0.41
SPTB-208ENST00000556626 SCLT1Q96NL6 688 aa12.47□□□□□ -0.41
SPTB-208ENST00000556626 PLVAPQ9BX97 442 aa12.47□□□□□ -0.41
SPTB-208ENST00000556626 SLFN5Q08AF3 891 aa12.47□□□□□ -0.41
SPTB-208ENST00000556626 OTUD6BQ8N6M0 293 aa12.47□□□□□ -0.41
SPTB-208ENST00000556626 PRPF4BQ13523 1007 aaKnown RBP12.47□□□□□ -0.41
SPTB-208ENST00000556626 TTC14Q96N46 770 aa12.47□□□□□ -0.41
SPTB-208ENST00000556626 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.47□□□□□ -0.41
SPTB-208ENST00000556626 CCDC96Q2M329 555 aa12.47□□□□□ -0.41
SPTB-208ENST00000556626 TMEM266Q2M3C6 531 aa12.47□□□□□ -0.41
SPTB-208ENST00000556626 RASAL2Q9UJF2 1139 aa12.47□□□□□ -0.41
SPTB-208ENST00000556626 TMCO5BA8MYB1 307 aa12.46□□□□□ -0.41
SPTB-208ENST00000556626 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.41
SPTB-208ENST00000556626 PPP1R14CQ8TAE6 165 aa12.46□□□□□ -0.41
SPTB-208ENST00000556626 TNIP1Q15025 636 aa12.46□□□□□ -0.41
SPTB-208ENST00000556626 HCLS1P14317 486 aaPredicted RBP12.46□□□□□ -0.41
SPTB-208ENST00000556626 FGD5Q6ZNL6 1462 aa12.46□□□□□ -0.41
SPTB-208ENST00000556626 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.41
SPTB-208ENST00000556626 TBC1D32Q96NH3 1257 aa12.46□□□□□ -0.41
SPTB-208ENST00000556626 NAP1L3Q99457 506 aaPredicted RBP12.46□□□□□ -0.41
SPTB-208ENST00000556626 C9orf84Q5VXU9 1444 aa12.46□□□□□ -0.42
SPTB-208ENST00000556626 KIAA0753Q2KHM9 967 aa12.46□□□□□ -0.42
SPTB-208ENST00000556626 FANCD2Q9BXW9 1451 aa12.46□□□□□ -0.42
SPTB-208ENST00000556626 ZSWIM4Q9H7M6 989 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms