RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 TEX13AQ9BXU3 409 aaPredicted RBP23.19■■□□□ 1.3
TUBB3-212ENST00000556565 USP42Q9H9J4 1324 aaKnown RBP23.18■■□□□ 1.3
TUBB3-212ENST00000556565 ANP32CO43423 234 aa23.18■■□□□ 1.3
TUBB3-212ENST00000556565 COL15A1P39059 1388 aa23.17■■□□□ 1.3
TUBB3-212ENST00000556565 GYS1P13807 737 aa23.17■■□□□ 1.3
TUBB3-212ENST00000556565 LMOD3Q0VAK6 560 aa23.17■■□□□ 1.3
TUBB3-212ENST00000556565 PNISRQ8TF01 805 aaKnown RBP23.17■■□□□ 1.3
TUBB3-212ENST00000556565 SRP68Q9UHB9 627 aaKnown RBP23.17■■□□□ 1.3
TUBB3-212ENST00000556565 RRP7AQ9Y3A4 280 aaKnown RBP23.17■■□□□ 1.3
TUBB3-212ENST00000556565 KDM3BQ7LBC6 1761 aa23.17■■□□□ 1.3
TUBB3-212ENST00000556565 MMP10P09238 476 aa23.16■■□□□ 1.3
TUBB3-212ENST00000556565 NLGN1Q8N2Q7 840 aa23.16■■□□□ 1.3
TUBB3-212ENST00000556565 MIS18AQ9NYP9 233 aa23.16■■□□□ 1.3
TUBB3-212ENST00000556565 CANXP27824 592 aaKnown RBP23.15■■□□□ 1.3
TUBB3-212ENST00000556565 CCDC184Q52MB2 194 aa23.15■■□□□ 1.3
TUBB3-212ENST00000556565 PRAMEF22A3QJZ6 481 aa23.13■■□□□ 1.29
TUBB3-212ENST00000556565 SNRPA1P09661 255 aaKnown RBP23.13■■□□□ 1.29
TUBB3-212ENST00000556565 NLGN2Q8NFZ4 835 aa23.13■■□□□ 1.29
TUBB3-212ENST00000556565 NEUROD2Q15784 382 aa23.12■■□□□ 1.29
TUBB3-212ENST00000556565 DCAF8L1A6NGE4 600 aa23.11■■□□□ 1.29
TUBB3-212ENST00000556565 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
TUBB3-212ENST00000556565 CD2APQ9Y5K6 639 aa23.11■■□□□ 1.29
TUBB3-212ENST00000556565 USP16Q9Y5T5 823 aa23.11■■□□□ 1.29
TUBB3-212ENST00000556565 LAMB4A4D0S4 1761 aa23.1■■□□□ 1.29
TUBB3-212ENST00000556565 ZPR1O75312 459 aa23.1■■□□□ 1.29
TUBB3-212ENST00000556565 FKBP8Q14318 412 aa23.1■■□□□ 1.29
TUBB3-212ENST00000556565 USPL1Q5W0Q7 1092 aa23.1■■□□□ 1.29
TUBB3-212ENST00000556565 NARFQ9UHQ1 456 aa23.1■■□□□ 1.29
TUBB3-212ENST00000556565 TRIM35Q9UPQ4 493 aa23.1■■□□□ 1.29
TUBB3-212ENST00000556565 A1BGP04217 495 aa23.09■■□□□ 1.29
TUBB3-212ENST00000556565 IL6STP40189 918 aaPredicted RBP23.09■■□□□ 1.29
TUBB3-212ENST00000556565 MRS2Q9HD23 443 aa23.09■■□□□ 1.29
TUBB3-212ENST00000556565 A0A087WZG4 1122 aa23.08■■□□□ 1.29
TUBB3-212ENST00000556565 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
TUBB3-212ENST00000556565 TSPYL4Q9UJ04 414 aa23.08■■□□□ 1.29
TUBB3-212ENST00000556565 ZNF330Q9Y3S2 320 aaPredicted RBP23.08■■□□□ 1.29
TUBB3-212ENST00000556565 SCN7AQ01118 1682 aa23.07■■□□□ 1.28
TUBB3-212ENST00000556565 C10orf71Q711Q0 1435 aa23.07■■□□□ 1.28
TUBB3-212ENST00000556565 DDR1Q08345 913 aa23.06■■□□□ 1.28
TUBB3-212ENST00000556565 BABAM1Q9NWV8 329 aa23.06■■□□□ 1.28
TUBB3-212ENST00000556565 PARP3Q9Y6F1 533 aa23.06■■□□□ 1.28
TUBB3-212ENST00000556565 APAF1O14727 1248 aa23.05■■□□□ 1.28
TUBB3-212ENST00000556565 GIGYF1O75420 1035 aaPredicted RBP23.05■■□□□ 1.28
TUBB3-212ENST00000556565 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
TUBB3-212ENST00000556565 BCL2L12Q9HB09 334 aa23.05■■□□□ 1.28
TUBB3-212ENST00000556565 KIF13BQ9NQT8 1826 aa23.03■■□□□ 1.28
TUBB3-212ENST00000556565 NPM2Q86SE8 214 aaKnown RBP23.03■■□□□ 1.28
TUBB3-212ENST00000556565 TBC1D2BQ9UPU7 963 aa23.03■■□□□ 1.28
TUBB3-212ENST00000556565 NBPF26B4DH59 902 aa23.02■■□□□ 1.28
TUBB3-212ENST00000556565 POLRMTO00411 1230 aaKnown RBP23.02■■□□□ 1.28
TUBB3-212ENST00000556565 TM4SF1P30408 202 aa23.02■■□□□ 1.28
TUBB3-212ENST00000556565 NFIXQ14938 502 aa23.02■■□□□ 1.28
TUBB3-212ENST00000556565 NBPF10Q6P3W6 841 aaKnown RBP23.02■■□□□ 1.28
TUBB3-212ENST00000556565 NBPF15Q8N660 670 aa23.02■■□□□ 1.28
TUBB3-212ENST00000556565 GPR162Q16538 588 aa23.01■■□□□ 1.27
TUBB3-212ENST00000556565 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
TUBB3-212ENST00000556565 BCORQ6W2J9 1755 aa23.01■■□□□ 1.27
TUBB3-212ENST00000556565 PXDNLA1KZ92 1463 aa23■■□□□ 1.27
TUBB3-212ENST00000556565 CHL1O00533 1208 aa23■■□□□ 1.27
TUBB3-212ENST00000556565 DZIP3Q86Y13 1208 aaKnown RBP23■■□□□ 1.27
TUBB3-212ENST00000556565 KIAA1551Q9HCM1 1747 aa22.99■■□□□ 1.27
TUBB3-212ENST00000556565 CAMTA2O94983 1202 aa22.99■■□□□ 1.27
TUBB3-212ENST00000556565 LAS1LQ9Y4W2 734 aaKnown RBP22.98■■□□□ 1.27
TUBB3-212ENST00000556565 YBX3P16989 372 aaKnown RBP eCLIP22.97■■□□□ 1.27
TUBB3-212ENST00000556565 TBC1D9BQ66K14 1250 aa22.96■■□□□ 1.27
TUBB3-212ENST00000556565 BICDL1Q6ZP65 573 aa22.96■■□□□ 1.27
TUBB3-212ENST00000556565 NRXN2Q9P2S2 1712 aa22.96■■□□□ 1.27
TUBB3-212ENST00000556565 TGFB2P61812 414 aa22.95■■□□□ 1.26
TUBB3-212ENST00000556565 CALD1Q05682 793 aaKnown RBP22.95■■□□□ 1.26
TUBB3-212ENST00000556565 ERBB4Q15303 1308 aa22.95■■□□□ 1.26
TUBB3-212ENST00000556565 CFAP44Q96MT7 982 aa22.95■■□□□ 1.26
TUBB3-212ENST00000556565 GOLGB1Q14789 3259 aaKnown RBP22.95■■□□□ 1.26
TUBB3-212ENST00000556565 AFDNP55196 1824 aaKnown RBP22.94■■□□□ 1.26
TUBB3-212ENST00000556565 SERPINB2P05120 415 aa22.94■■□□□ 1.26
TUBB3-212ENST00000556565 CARMIL3Q8ND23 1372 aa22.93■■□□□ 1.26
TUBB3-212ENST00000556565 KRT24Q2M2I5 525 aa22.93■■□□□ 1.26
TUBB3-212ENST00000556565 IFT57Q9NWB7 429 aa22.93■■□□□ 1.26
TUBB3-212ENST00000556565 WWC3Q9ULE0 1092 aa22.93■■□□□ 1.26
TUBB3-212ENST00000556565 N4BP2Q86UW6 1770 aaPredicted RBP22.93■■□□□ 1.26
TUBB3-212ENST00000556565 SENP3-EIF4A1A0A087X0R7 540 aa22.92■■□□□ 1.26
TUBB3-212ENST00000556565 A0A0G2JLW4 131 aa22.92■■□□□ 1.26
TUBB3-212ENST00000556565 ZNF853P0CG23 659 aa22.92■■□□□ 1.26
TUBB3-212ENST00000556565 MYL6BP14649 208 aa22.92■■□□□ 1.26
TUBB3-212ENST00000556565 MBIPQ9NS73 344 aa22.92■■□□□ 1.26
TUBB3-212ENST00000556565 ZNF652Q9Y2D9 606 aa22.92■■□□□ 1.26
TUBB3-212ENST00000556565 RGL2O15211 777 aa22.91■■□□□ 1.26
TUBB3-212ENST00000556565 DPEP1P16444 411 aa22.91■■□□□ 1.26
TUBB3-212ENST00000556565 EIF2S2P20042 333 aaKnown RBP22.91■■□□□ 1.26
TUBB3-212ENST00000556565 NGEFQ8N5V2 710 aa22.91■■□□□ 1.26
TUBB3-212ENST00000556565 UTRNP46939 3433 aa22.91■■□□□ 1.26
TUBB3-212ENST00000556565 GRIN3BO60391 1043 aa22.9■■□□□ 1.26
TUBB3-212ENST00000556565 GNAI1P63096 354 aa22.9■■□□□ 1.26
TUBB3-212ENST00000556565 CCDC27Q2M243 656 aa22.9■■□□□ 1.26
TUBB3-212ENST00000556565 CLEC4GQ6UXB4 293 aa22.9■■□□□ 1.26
TUBB3-212ENST00000556565 YY1P25490 414 aa22.89■■□□□ 1.25
TUBB3-212ENST00000556565 SETDB2Q96T68 719 aa22.89■■□□□ 1.25
TUBB3-212ENST00000556565 HOXB7P09629 217 aa22.88■■□□□ 1.25
TUBB3-212ENST00000556565 PDIA6Q15084 440 aa22.88■■□□□ 1.25
TUBB3-212ENST00000556565 KIF6Q6ZMV9 814 aa22.88■■□□□ 1.25
TUBB3-212ENST00000556565 TTLL7Q6ZT98 887 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms