RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 ZBTB39O15060 712 aa6.49□□□□□ -1.37
SPTLC2-204ENST00000556264 RECKO95980 971 aa6.49□□□□□ -1.37
SPTLC2-204ENST00000556264 FMR1Q06787 632 aaKnown RBP eCLIP6.49□□□□□ -1.37
SPTLC2-204ENST00000556264 IQSEC3Q9UPP2 1182 aaPredicted RBP6.49□□□□□ -1.37
SPTLC2-204ENST00000556264 HCN4Q9Y3Q4 1203 aa6.49□□□□□ -1.37
SPTLC2-204ENST00000556264 HRH3Q9Y5N1 445 aa6.49□□□□□ -1.37
SPTLC2-204ENST00000556264 ADH1AP07327 375 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 BRD2P25440 801 aaKnown RBP6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 SLC19A1P41440 591 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 MAPK8P45983 427 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 CBLBQ13191 982 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 DSC3Q14574 896 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 FAM26DQ5JW98 314 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 SH3PXD2AQ5TCZ1 1133 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 ATCAYQ86WG3 371 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 ABTB2Q8N961 1025 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 KDF1Q8NAX2 398 aaPredicted RBP6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 MYO19Q96H55 970 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 DMRTB1Q96MA1 342 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 BACH2Q9BYV9 841 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 PRKD2Q9BZL6 878 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 CABP1Q9NZU7 370 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 ZNF232Q9UNY5 417 aa6.48□□□□□ -1.37
SPTLC2-204ENST00000556264 EML1O00423 815 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 ALDH1A1P00352 501 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 LDHBP07195 334 aaKnown RBP6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 NOS2P35228 1153 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 CENPCQ03188 943 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 EHHADHQ08426 723 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 CLN3Q13286 438 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 PDE3BQ13370 1112 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 TEAD4Q15561 434 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 POTEGQ6S5H5 508 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 POTEAQ6S8J7 498 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 ZDHHC1Q8WTX9 485 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 PARP3Q9Y6F1 533 aa6.47□□□□□ -1.37
SPTLC2-204ENST00000556264 MEN1O00255 615 aa6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 XPCQ01831 940 aaPredicted RBP6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 NNTQ13423 1086 aa6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 MRPL58Q14197 206 aaKnown RBP6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 C11orf91Q3C1V1 193 aa6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 ALDH16A1Q8IZ83 802 aa6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 NBPF15Q8N660 670 aa6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 L3MBTL2Q969R5 705 aa6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 AGBL1Q96MI9 1066 aa6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 NLRP3Q96P20 1036 aa6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 FAM129BQ96TA1 746 aa6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 FHDC1Q9C0D6 1143 aaPredicted RBP6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 WASF2Q9Y6W5 498 aa6.46□□□□□ -1.38
SPTLC2-204ENST00000556264 GPR182O15218 404 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 PRPF40AO75400 957 aaKnown RBP6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 IGHA2P01877 340 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 PTGIRP43119 386 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 HIRAP54198 1017 aaPredicted RBP6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 DNM1Q05193 864 aaKnown RBP6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 DGKZQ13574 1117 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 RNF166Q96A37 237 aaPredicted RBP6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 IFT43Q96FT9 208 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 FAM161BQ96MY7 647 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 DUSP9Q99956 384 aaKnown RBP6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 NIF3L1Q9GZT8 377 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 RNF19AQ9NV58 838 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 KLK14Q9P0G3 267 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 PARP2Q9UGN5 583 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 WWC3Q9ULE0 1092 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 POLIQ9UNA4 740 aa6.45□□□□□ -1.38
SPTLC2-204ENST00000556264 MZF1P28698 734 aaPredicted RBP6.44□□□□□ -1.38
SPTLC2-204ENST00000556264 FGD1P98174 961 aa6.44□□□□□ -1.38
SPTLC2-204ENST00000556264 FOXC1Q12948 553 aa6.44□□□□□ -1.38
SPTLC2-204ENST00000556264 RTN1Q16799 776 aa6.44□□□□□ -1.38
SPTLC2-204ENST00000556264 PPARGC1BQ86YN6 1023 aaKnown RBP6.44□□□□□ -1.38
SPTLC2-204ENST00000556264 ETFBKMTQ8IXQ9 262 aa6.44□□□□□ -1.38
SPTLC2-204ENST00000556264 ITPKCQ96DU7 683 aa6.44□□□□□ -1.38
SPTLC2-204ENST00000556264 ZSCAN10Q96SZ4 725 aaPredicted RBP6.44□□□□□ -1.38
SPTLC2-204ENST00000556264 SETDB2Q96T68 719 aa6.44□□□□□ -1.38
SPTLC2-204ENST00000556264 PHACTR1Q9C0D0 580 aa6.44□□□□□ -1.38
SPTLC2-204ENST00000556264 SCAMP3O14828 347 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 ZAP70P43403 619 aa6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 RELBQ01201 579 aa6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 C9orf131Q5VYM1 1079 aa6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 TMEM214Q6NUQ4 689 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 Q6ZVU0 165 aa6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 ZNF295-AS1Q8N0V1 137 aa6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 GJD3Q8N144 294 aa6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 EDEM1Q92611 657 aa6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 ALKBH8Q96BT7 664 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 C8orf37Q96NL8 207 aa6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 NIFKQ9BYG3 293 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 ZNF395Q9H8N7 513 aaPredicted RBP6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 MRS2Q9HD23 443 aa6.43□□□□□ -1.38
SPTLC2-204ENST00000556264 ZIC2O95409 532 aaPredicted RBP6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 PDGFAP04085 211 aa6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 ERCC5P28715 1186 aaPredicted RBP6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 GTF2E1P29083 439 aaPredicted RBP6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 USP5P45974 858 aa6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 ZC3H6P61129 1189 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 HDLBPQ00341 1268 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 ATP2B2Q01814 1243 aa6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 LDLRAD1Q5T700 205 aa6.42□□□□□ -1.38
SPTLC2-204ENST00000556264 SPRYD7Q5W111 196 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms