RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 ESF1Q9H501 851 aaKnown RBP6.52□□□□□ -1.37
EFCAB11-210ENST00000556078 MYO15BQ96JP2 1530 aa6.51□□□□□ -1.37
EFCAB11-210ENST00000556078 YBX3P16989 372 aaKnown RBP eCLIP6.51□□□□□ -1.37
EFCAB11-210ENST00000556078 C4orf17Q53FE4 359 aa6.51□□□□□ -1.37
EFCAB11-210ENST00000556078 FIGNL1Q6PIW4 674 aa6.51□□□□□ -1.37
EFCAB11-210ENST00000556078 AVENQ9NQS1 362 aaPredicted RBP6.51□□□□□ -1.37
EFCAB11-210ENST00000556078 RAB6BQ9NRW1 208 aa6.51□□□□□ -1.37
EFCAB11-210ENST00000556078 PCDHB11Q9Y5F2 797 aa6.51□□□□□ -1.37
EFCAB11-210ENST00000556078 ADH6P28332 368 aa6.5□□□□□ -1.37
EFCAB11-210ENST00000556078 GTF2E1P29083 439 aaPredicted RBP6.5□□□□□ -1.37
EFCAB11-210ENST00000556078 MCTP1Q6DN14 999 aa6.5□□□□□ -1.37
EFCAB11-210ENST00000556078 TRIM11Q96F44 468 aa6.5□□□□□ -1.37
EFCAB11-210ENST00000556078 PLVAPQ9BX97 442 aa6.5□□□□□ -1.37
EFCAB11-210ENST00000556078 SLC24A3Q9HC58 644 aa6.5□□□□□ -1.37
EFCAB11-210ENST00000556078 ARHGEF11O15085 1522 aa6.5□□□□□ -1.37
EFCAB11-210ENST00000556078 TXKP42681 527 aa6.49□□□□□ -1.37
EFCAB11-210ENST00000556078 FAM182BQ5T319 152 aa6.49□□□□□ -1.37
EFCAB11-210ENST00000556078 TMEM214Q6NUQ4 689 aaKnown RBP6.49□□□□□ -1.37
EFCAB11-210ENST00000556078 DNAAF2Q9NVR5 837 aaKnown RBP6.49□□□□□ -1.37
EFCAB11-210ENST00000556078 PCDHGC4Q9Y5F7 938 aa6.49□□□□□ -1.37
EFCAB11-210ENST00000556078 PAX4O43316 350 aa6.48□□□□□ -1.37
EFCAB11-210ENST00000556078 SLC24A1O60721 1099 aa6.48□□□□□ -1.37
EFCAB11-210ENST00000556078 RFC5P40937 340 aa6.48□□□□□ -1.37
EFCAB11-210ENST00000556078 DDRGK1Q96HY6 314 aa6.48□□□□□ -1.37
EFCAB11-210ENST00000556078 KLF15Q9UIH9 416 aa6.48□□□□□ -1.37
EFCAB11-210ENST00000556078 ATP1B4Q9UN42 357 aaPredicted RBP6.48□□□□□ -1.37
EFCAB11-210ENST00000556078 ESCO1Q5FWF5 840 aa6.47□□□□□ -1.37
EFCAB11-210ENST00000556078 NLRP8Q86W28 1048 aa6.47□□□□□ -1.37
EFCAB11-210ENST00000556078 FCHSD1Q86WN1 690 aa6.47□□□□□ -1.37
EFCAB11-210ENST00000556078 PPARGC1BQ86YN6 1023 aaKnown RBP6.47□□□□□ -1.37
EFCAB11-210ENST00000556078 RHBDD1Q8TEB9 315 aa6.47□□□□□ -1.37
EFCAB11-210ENST00000556078 ZCCHC2Q9C0B9 1178 aaKnown RBP6.47□□□□□ -1.37
EFCAB11-210ENST00000556078 SPDYE3A6NKU9 549 aa6.46□□□□□ -1.38
EFCAB11-210ENST00000556078 APBA3O96018 575 aa6.46□□□□□ -1.38
EFCAB11-210ENST00000556078 NR1H3Q13133 447 aa6.46□□□□□ -1.38
EFCAB11-210ENST00000556078 C1orf216Q8TAB5 229 aa6.46□□□□□ -1.38
EFCAB11-210ENST00000556078 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.38
EFCAB11-210ENST00000556078 MYCP01106 439 aaPredicted RBP6.45□□□□□ -1.38
EFCAB11-210ENST00000556078 TMEM259Q4ZIN3 620 aa6.45□□□□□ -1.38
EFCAB11-210ENST00000556078 GJD4Q96KN9 370 aaPredicted RBP6.45□□□□□ -1.38
EFCAB11-210ENST00000556078 ZNF330Q9Y3S2 320 aaPredicted RBP6.45□□□□□ -1.38
EFCAB11-210ENST00000556078 ATXN7O15265 892 aaPredicted RBP6.44□□□□□ -1.38
EFCAB11-210ENST00000556078 TNP2Q05952 138 aa6.44□□□□□ -1.38
EFCAB11-210ENST00000556078 PRRT3Q5FWE3 981 aa6.44□□□□□ -1.38
EFCAB11-210ENST00000556078 CYB5RLQ6IPT4 315 aa6.44□□□□□ -1.38
EFCAB11-210ENST00000556078 TBC1D9Q6ZT07 1266 aa6.44□□□□□ -1.38
EFCAB11-210ENST00000556078 HCN2Q9UL51 889 aa6.44□□□□□ -1.38
EFCAB11-210ENST00000556078 MAPTP10636 758 aaKnown RBP6.43□□□□□ -1.38
EFCAB11-210ENST00000556078 ZNF468Q5VIY5 522 aaPredicted RBP6.43□□□□□ -1.38
EFCAB11-210ENST00000556078 FAM117AQ9C073 453 aa6.43□□□□□ -1.38
EFCAB11-210ENST00000556078 ATP4AP20648 1035 aa6.42□□□□□ -1.38
EFCAB11-210ENST00000556078 FZD5Q13467 585 aa6.42□□□□□ -1.38
EFCAB11-210ENST00000556078 ARAP1Q96P48 1450 aa6.41□□□□□ -1.38
EFCAB11-210ENST00000556078 ELOA3CA0A087WX78 387 aaPredicted RBP6.41□□□□□ -1.38
EFCAB11-210ENST00000556078 ELOA3DA6NLF2 546 aaPredicted RBP6.41□□□□□ -1.38
EFCAB11-210ENST00000556078 ELOA3BQ3SY89 546 aa6.41□□□□□ -1.38
EFCAB11-210ENST00000556078 ELOA3Q8NG57 546 aa6.41□□□□□ -1.38
EFCAB11-210ENST00000556078 MDFIQ99750 246 aa6.41□□□□□ -1.38
EFCAB11-210ENST00000556078 CDCA7Q9BWT1 371 aaPredicted RBP6.41□□□□□ -1.38
EFCAB11-210ENST00000556078 KDM4CQ9H3R0 1056 aa6.41□□□□□ -1.38
EFCAB11-210ENST00000556078 FAM157BP0CG42 384 aa6.4□□□□□ -1.38
EFCAB11-210ENST00000556078 CD33P20138 364 aa6.4□□□□□ -1.38
EFCAB11-210ENST00000556078 TLR1Q15399 786 aa6.4□□□□□ -1.38
EFCAB11-210ENST00000556078 NACC1Q96RE7 527 aa6.4□□□□□ -1.38
EFCAB11-210ENST00000556078 KRTAP4-2Q9BYR5 136 aa6.4□□□□□ -1.38
EFCAB11-210ENST00000556078 DCDC2BA2VCK2 349 aa6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 H2AFB1P0C5Y9 115 aa6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 H2AFB2P0C5Z0 115 aa6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 PLA2G4AP47712 749 aa6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 PCBP4P57723 403 aaKnown RBP6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 CCDC85AQ96PX6 553 aaPredicted RBP6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 ETNK1Q9HBU6 452 aa6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 PRDM6Q9NQX0 595 aa6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 PRR12Q9ULL5 1215 aa6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 COL17A1Q9UMD9 1497 aaPredicted RBP6.39□□□□□ -1.39
EFCAB11-210ENST00000556078 A0A1W2PNR3 127 aa6.38□□□□□ -1.39
EFCAB11-210ENST00000556078 ALAS2P22557 587 aa6.38□□□□□ -1.39
EFCAB11-210ENST00000556078 LAMC2Q13753 1193 aa6.38□□□□□ -1.39
EFCAB11-210ENST00000556078 COL9A3Q14050 684 aaPredicted RBP6.38□□□□□ -1.39
EFCAB11-210ENST00000556078 FMNL2Q96PY5 1086 aa6.38□□□□□ -1.39
EFCAB11-210ENST00000556078 NIFKQ9BYG3 293 aaKnown RBP6.38□□□□□ -1.39
EFCAB11-210ENST00000556078 KHNYNO15037 678 aaKnown RBP6.37□□□□□ -1.39
EFCAB11-210ENST00000556078 ELNP15502 786 aa6.37□□□□□ -1.39
EFCAB11-210ENST00000556078 USP4Q13107 963 aa6.37□□□□□ -1.39
EFCAB11-210ENST00000556078 SAMD5Q5TGI4 173 aa6.37□□□□□ -1.39
EFCAB11-210ENST00000556078 ILDR2Q71H61 639 aa6.37□□□□□ -1.39
EFCAB11-210ENST00000556078 GOPCQ9HD26 462 aa6.37□□□□□ -1.39
EFCAB11-210ENST00000556078 CEP126Q9P2H0 1117 aa6.37□□□□□ -1.39
EFCAB11-210ENST00000556078 WDR62O43379 1518 aa6.36□□□□□ -1.39
EFCAB11-210ENST00000556078 NCAPD3P42695 1498 aa6.36□□□□□ -1.39
EFCAB11-210ENST00000556078 ADARB2-AS1A8MUL3 147 aa6.36□□□□□ -1.39
EFCAB11-210ENST00000556078 SOCS7O14512 581 aa6.36□□□□□ -1.39
EFCAB11-210ENST00000556078 EFSO43281 561 aa6.36□□□□□ -1.39
EFCAB11-210ENST00000556078 GPR37L1O60883 481 aa6.36□□□□□ -1.39
EFCAB11-210ENST00000556078 GPBP1L1Q9HC44 474 aaPredicted RBP6.36□□□□□ -1.39
EFCAB11-210ENST00000556078 LAMC3Q9Y6N6 1575 aa6.35□□□□□ -1.39
EFCAB11-210ENST00000556078 TRIM28Q13263 835 aaKnown RBP6.35□□□□□ -1.39
EFCAB11-210ENST00000556078 NBPF1Q3BBV0 1214 aa6.35□□□□□ -1.39
EFCAB11-210ENST00000556078 ARSJQ5FYB0 599 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms