RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-208ENST00000556067 PPEF1O14829 653 aaPredicted RBP7.39□□□□□ -1.23
ATL1-208ENST00000556067 FDX1P10109 184 aa7.39□□□□□ -1.23
ATL1-208ENST00000556067 ATF3P18847 181 aa7.39□□□□□ -1.23
ATL1-208ENST00000556067 TNNT2P45379 298 aaPredicted RBP7.39□□□□□ -1.23
ATL1-208ENST00000556067 NEUROD2Q15784 382 aa7.39□□□□□ -1.23
ATL1-208ENST00000556067 Q3C1V9 767 aa7.39□□□□□ -1.23
ATL1-208ENST00000556067 SYMPKQ92797 1274 aaKnown RBP7.39□□□□□ -1.23
ATL1-208ENST00000556067 COG3Q96JB2 828 aa7.39□□□□□ -1.23
ATL1-208ENST00000556067 XRN1Q8IZH2 1706 aaKnown RBP7.38□□□□□ -1.23
ATL1-208ENST00000556067 ADGRB2O60241 1585 aa7.38□□□□□ -1.23
ATL1-208ENST00000556067 EDC4Q6P2E9 1401 aaKnown RBP7.38□□□□□ -1.23
ATL1-208ENST00000556067 ANKARQ7Z5J8 1434 aa7.38□□□□□ -1.23
ATL1-208ENST00000556067 ACEP12821 1306 aa7.38□□□□□ -1.23
ATL1-208ENST00000556067 CCDC184Q52MB2 194 aa7.38□□□□□ -1.23
ATL1-208ENST00000556067 PNISRQ8TF01 805 aaKnown RBP7.38□□□□□ -1.23
ATL1-208ENST00000556067 GGNBP2Q9H3C7 697 aa7.38□□□□□ -1.23
ATL1-208ENST00000556067 C19orf44Q9H6X5 657 aa7.38□□□□□ -1.23
ATL1-208ENST00000556067 PRDM9Q9NQV7 894 aa7.38□□□□□ -1.23
ATL1-208ENST00000556067 NKTRP30414 1462 aaKnown RBP7.37□□□□□ -1.23
ATL1-208ENST00000556067 RNF223E7ERA6 249 aa7.37□□□□□ -1.23
ATL1-208ENST00000556067 C6orf229H3BNL8 230 aa7.37□□□□□ -1.23
ATL1-208ENST00000556067 FYB1O15117 783 aa7.37□□□□□ -1.23
ATL1-208ENST00000556067 CSPP1Q1MSJ5 1256 aa7.37□□□□□ -1.23
ATL1-208ENST00000556067 BRICD5Q6PL45 260 aa7.37□□□□□ -1.23
ATL1-208ENST00000556067 PMFBP1Q8TBY8 1022 aa7.37□□□□□ -1.23
ATL1-208ENST00000556067 THAP11Q96EK4 314 aa7.37□□□□□ -1.23
ATL1-208ENST00000556067 NUDCQ9Y266 331 aa7.37□□□□□ -1.23
ATL1-208ENST00000556067 LMTK3Q96Q04 1460 aa7.36□□□□□ -1.23
ATL1-208ENST00000556067 ADGRL3Q9HAR2 1447 aa7.36□□□□□ -1.23
ATL1-208ENST00000556067 NCOA3Q9Y6Q9 1424 aa7.36□□□□□ -1.23
ATL1-208ENST00000556067 CHD2O14647 1828 aaKnown RBP7.36□□□□□ -1.23
ATL1-208ENST00000556067 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.36□□□□□ -1.23
ATL1-208ENST00000556067 TTC21AQ8NDW8 1320 aa7.36□□□□□ -1.23
ATL1-208ENST00000556067 PRR36Q9H6K5 1346 aa7.36□□□□□ -1.23
ATL1-208ENST00000556067 PSME1Q06323 249 aa7.36□□□□□ -1.23
ATL1-208ENST00000556067 ESCO1Q5FWF5 840 aa7.36□□□□□ -1.23
ATL1-208ENST00000556067 FAM160A2Q8N612 972 aaPredicted RBP7.36□□□□□ -1.23
ATL1-208ENST00000556067 PCDHGC3Q9UN70 934 aa7.36□□□□□ -1.23
ATL1-208ENST00000556067 USP32Q8NFA0 1604 aa7.36□□□□□ -1.23
ATL1-208ENST00000556067 CPSF1Q10570 1443 aaKnown RBP7.35□□□□□ -1.23
ATL1-208ENST00000556067 TTC21BQ7Z4L5 1316 aa7.35□□□□□ -1.23
ATL1-208ENST00000556067 CDC42BPGQ6DT37 1551 aa7.35□□□□□ -1.23
ATL1-208ENST00000556067 DIXDC1Q155Q3 683 aa7.35□□□□□ -1.23
ATL1-208ENST00000556067 USB1Q9BQ65 265 aaKnown RBP7.35□□□□□ -1.23
ATL1-208ENST00000556067 PRKD2Q9BZL6 878 aa7.35□□□□□ -1.23
ATL1-208ENST00000556067 FAM117AQ9C073 453 aa7.35□□□□□ -1.23
ATL1-208ENST00000556067 PNNQ9H307 717 aaKnown RBP7.35□□□□□ -1.23
ATL1-208ENST00000556067 SALL2Q9Y467 1007 aaPredicted RBP7.35□□□□□ -1.23
ATL1-208ENST00000556067 MSH6P52701 1360 aa7.34□□□□□ -1.23
ATL1-208ENST00000556067 TMEM94Q12767 1356 aa7.34□□□□□ -1.23
ATL1-208ENST00000556067 NWD1Q149M9 1564 aa7.34□□□□□ -1.23
ATL1-208ENST00000556067 PPM1GO15355 546 aaPredicted RBP7.34□□□□□ -1.23
ATL1-208ENST00000556067 NEFMP07197 916 aa7.34□□□□□ -1.23
ATL1-208ENST00000556067 MTHFSP49914 203 aa7.34□□□□□ -1.23
ATL1-208ENST00000556067 RIC3Q7Z5B4 369 aa7.34□□□□□ -1.23
ATL1-208ENST00000556067 NME9Q86XW9 330 aa7.34□□□□□ -1.23
ATL1-208ENST00000556067 POLR3EQ9NVU0 708 aa7.34□□□□□ -1.23
ATL1-208ENST00000556067 CD163L1Q9NR16 1453 aa7.34□□□□□ -1.23
ATL1-208ENST00000556067 POLR3AO14802 1390 aaPredicted RBP7.33□□□□□ -1.24
ATL1-208ENST00000556067 INSRP06213 1382 aa7.33□□□□□ -1.24
ATL1-208ENST00000556067 ZBED9Q6R2W3 1325 aa7.33□□□□□ -1.24
ATL1-208ENST00000556067 MYSM1Q5VVJ2 828 aa7.33□□□□□ -1.24
ATL1-208ENST00000556067 RSBN1LQ6PCB5 846 aaPredicted RBP7.33□□□□□ -1.24
ATL1-208ENST00000556067 FCF1Q9Y324 198 aaKnown RBP7.33□□□□□ -1.24
ATL1-208ENST00000556067 USP6P35125 1406 aa7.33□□□□□ -1.24
ATL1-208ENST00000556067 ITSN1Q15811 1721 aa7.32□□□□□ -1.24
ATL1-208ENST00000556067 U2SURPO15042 1029 aaKnown RBP7.32□□□□□ -1.24
ATL1-208ENST00000556067 DIAPH1O60610 1272 aaKnown RBP7.32□□□□□ -1.24
ATL1-208ENST00000556067 BRPF1P55201 1214 aaPredicted RBP7.32□□□□□ -1.24
ATL1-208ENST00000556067 MSS51Q4VC12 460 aa7.32□□□□□ -1.24
ATL1-208ENST00000556067 NGEFQ8N5V2 710 aa7.32□□□□□ -1.24
ATL1-208ENST00000556067 ABTB2Q8N961 1025 aa7.32□□□□□ -1.24
ATL1-208ENST00000556067 ANKLE1Q8NAG6 615 aa7.32□□□□□ -1.24
ATL1-208ENST00000556067 DDRGK1Q96HY6 314 aa7.32□□□□□ -1.24
ATL1-208ENST00000556067 ADAMTS8Q9UP79 889 aa7.32□□□□□ -1.24
ATL1-208ENST00000556067 PCDHB15Q9Y5E8 787 aa7.32□□□□□ -1.24
ATL1-208ENST00000556067 DCCP43146 1447 aa7.32□□□□□ -1.24
ATL1-208ENST00000556067 SPTLC1O15269 473 aa7.31□□□□□ -1.24
ATL1-208ENST00000556067 RGS20O76081 388 aa7.31□□□□□ -1.24
ATL1-208ENST00000556067 U2AF1L5P0DN76 240 aaPredicted RBP7.31□□□□□ -1.24
ATL1-208ENST00000556067 U2AF1Q01081 240 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATL1-208ENST00000556067 MTMR2Q13614 643 aa7.31□□□□□ -1.24
ATL1-208ENST00000556067 RETREG3Q86VR2 466 aa7.31□□□□□ -1.24
ATL1-208ENST00000556067 CCDC24Q8N4L8 307 aa7.31□□□□□ -1.24
ATL1-208ENST00000556067 RSPH6AQ9H0K4 717 aa7.31□□□□□ -1.24
ATL1-208ENST00000556067 FMN2Q9NZ56 1722 aa7.31□□□□□ -1.24
ATL1-208ENST00000556067 LIMD1Q9UGP4 676 aa7.31□□□□□ -1.24
ATL1-208ENST00000556067 AATKQ6ZMQ8 1374 aa7.31□□□□□ -1.24
ATL1-208ENST00000556067 ZNF335Q9H4Z2 1342 aaPredicted RBP7.3□□□□□ -1.24
ATL1-208ENST00000556067 NUTM2BA6NNL0 878 aaPredicted RBP7.3□□□□□ -1.24
ATL1-208ENST00000556067 NUTM2EB1AL46 878 aaPredicted RBP7.3□□□□□ -1.24
ATL1-208ENST00000556067 FOXO3O43524 673 aa7.3□□□□□ -1.24
ATL1-208ENST00000556067 NEFLP07196 543 aa7.3□□□□□ -1.24
ATL1-208ENST00000556067 PDE3BQ13370 1112 aa7.3□□□□□ -1.24
ATL1-208ENST00000556067 PLA2G2CQ5R387 149 aa7.3□□□□□ -1.24
ATL1-208ENST00000556067 KRT28Q7Z3Y7 464 aa7.3□□□□□ -1.24
ATL1-208ENST00000556067 NUTM2AQ8IVF1 878 aaPredicted RBP7.3□□□□□ -1.24
ATL1-208ENST00000556067 KCNH5Q8NCM2 988 aa7.3□□□□□ -1.24
ATL1-208ENST00000556067 IL27Q8NEV9 243 aa7.3□□□□□ -1.24
ATL1-208ENST00000556067 CABLES1Q8TDN4 633 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms