RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 POLKQ9UBT6 870 aa9.19□□□□□ -0.94
PSEN1-216ENST00000556066 WASHC2AQ641Q2 1341 aa9.19□□□□□ -0.94
PSEN1-216ENST00000556066 GOLGB1Q14789 3259 aaKnown RBP9.19□□□□□ -0.94
PSEN1-216ENST00000556066 TAF1LQ8IZX4 1826 aa9.19□□□□□ -0.94
PSEN1-216ENST00000556066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-216ENST00000556066 PNPLA7Q6ZV29 1317 aa9.18□□□□□ -0.94
PSEN1-216ENST00000556066 ZFP91Q96JP5 570 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-216ENST00000556066 EYA1Q99502 592 aa9.18□□□□□ -0.94
PSEN1-216ENST00000556066 MAP3K5Q99683 1374 aa9.18□□□□□ -0.94
PSEN1-216ENST00000556066 SPG7Q9UQ90 795 aa9.18□□□□□ -0.94
PSEN1-216ENST00000556066 CHD4Q14839 1912 aa9.17□□□□□ -0.94
PSEN1-216ENST00000556066 PALLDQ8WX93 1383 aa9.17□□□□□ -0.94
PSEN1-216ENST00000556066 STK25O00506 426 aa9.17□□□□□ -0.94
PSEN1-216ENST00000556066 POLD1P28340 1107 aa9.17□□□□□ -0.94
PSEN1-216ENST00000556066 SLC16A10Q8TF71 515 aa9.17□□□□□ -0.94
PSEN1-216ENST00000556066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.17□□□□□ -0.946e-6■□□□□ 8.9
PSEN1-216ENST00000556066 FAM205CA6NFA0 338 aa9.16□□□□□ -0.94
PSEN1-216ENST00000556066 EIF4A2Q14240 407 aaKnown RBP9.16□□□□□ -0.94
PSEN1-216ENST00000556066 MORC1Q86VD1 984 aa9.16□□□□□ -0.94
PSEN1-216ENST00000556066 NCAPD2Q15021 1401 aa9.15□□□□□ -0.94
PSEN1-216ENST00000556066 COL24A1Q17RW2 1714 aa9.15□□□□□ -0.94
PSEN1-216ENST00000556066 MSL1Q68DK7 614 aa9.15□□□□□ -0.94
PSEN1-216ENST00000556066 PAXIP1Q6ZW49 1069 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-216ENST00000556066 COL23A1Q86Y22 540 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-216ENST00000556066 PIGBQ92521 554 aa9.15□□□□□ -0.94
PSEN1-216ENST00000556066 SMARCC1Q92922 1105 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-216ENST00000556066 TMOD3Q9NYL9 352 aa9.15□□□□□ -0.94
PSEN1-216ENST00000556066 KNSTRNQ9Y448 316 aa9.15□□□□□ -0.94
PSEN1-216ENST00000556066 C4BP0C0L5 1744 aa9.14□□□□□ -0.95
PSEN1-216ENST00000556066 GIGYF1O75420 1035 aaPredicted RBP9.14□□□□□ -0.95
PSEN1-216ENST00000556066 GPR162Q16538 588 aa9.14□□□□□ -0.95
PSEN1-216ENST00000556066 IFNL2Q8IZJ0 200 aa9.14□□□□□ -0.95
PSEN1-216ENST00000556066 PDCD7Q8N8D1 485 aaKnown RBP9.14□□□□□ -0.95
PSEN1-216ENST00000556066 SPRYD3Q8NCJ5 442 aa9.14□□□□□ -0.95
PSEN1-216ENST00000556066 HS3ST6Q96QI5 342 aa9.14□□□□□ -0.95
PSEN1-216ENST00000556066 UBR3Q6ZT12 1888 aa9.13□□□□□ -0.95
PSEN1-216ENST00000556066 PHF14O94880 888 aa9.13□□□□□ -0.95
PSEN1-216ENST00000556066 PHKG2P15735 406 aa9.13□□□□□ -0.95
PSEN1-216ENST00000556066 HMGB2P26583 209 aaKnown RBP9.13□□□□□ -0.95
PSEN1-216ENST00000556066 PDAP1Q13442 181 aaKnown RBP9.13□□□□□ -0.95
PSEN1-216ENST00000556066 NKX1-1Q15270 411 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-216ENST00000556066 AK7Q96M32 723 aa9.13□□□□□ -0.95
PSEN1-216ENST00000556066 CFAP44Q96MT7 982 aa9.13□□□□□ -0.95
PSEN1-216ENST00000556066 STK24Q9Y6E0 443 aa9.13□□□□□ -0.95
PSEN1-216ENST00000556066 IGSF1Q8N6C5 1336 aa9.12□□□□□ -0.95
PSEN1-216ENST00000556066 LOC102724428A0A0B4J2F2 783 aa9.12□□□□□ -0.95
PSEN1-216ENST00000556066 SIK1P57059 783 aa9.12□□□□□ -0.95
PSEN1-216ENST00000556066 SMIM5Q71RC9 77 aa9.12□□□□□ -0.95
PSEN1-216ENST00000556066 FLAD1Q8NFF5 587 aa9.12□□□□□ -0.95
PSEN1-216ENST00000556066 NLGN2Q8NFZ4 835 aa9.12□□□□□ -0.95
PSEN1-216ENST00000556066 ASAP1Q9ULH1 1129 aa9.12□□□□□ -0.95
PSEN1-216ENST00000556066 YBX3P16989 372 aaKnown RBP eCLIP9.11□□□□□ -0.95
PSEN1-216ENST00000556066 ATP6V1AP38606 617 aa9.11□□□□□ -0.95
PSEN1-216ENST00000556066 CNGB1Q14028 1251 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-216ENST00000556066 PLEKHO1Q53GL0 409 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-216ENST00000556066 ZNF530Q6P9A1 599 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-216ENST00000556066 AEBP1Q8IUX7 1158 aa9.11□□□□□ -0.95
PSEN1-216ENST00000556066 KIF7Q2M1P5 1343 aa9.1□□□□□ -0.95
PSEN1-216ENST00000556066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.1□□□□□ -0.95
PSEN1-216ENST00000556066 GNPATO15228 680 aa9.1□□□□□ -0.95
PSEN1-216ENST00000556066 HSP90AB1P08238 724 aaKnown RBP9.1□□□□□ -0.95
PSEN1-216ENST00000556066 PSEN1P49768 467 aa9.1□□□□□ -0.95
PSEN1-216ENST00000556066 SULT6B1Q6IMI4 303 aa9.1□□□□□ -0.95
PSEN1-216ENST00000556066 AMIGO3Q86WK7 504 aa9.1□□□□□ -0.95
PSEN1-216ENST00000556066 ZNF710Q8N1W2 664 aa9.1□□□□□ -0.95
PSEN1-216ENST00000556066 LINC00116Q8NCU8 138 aa9.1□□□□□ -0.95
PSEN1-216ENST00000556066 VIRMAQ69YN4 1812 aaKnown RBP9.1□□□□□ -0.95
PSEN1-216ENST00000556066 MTHFSP49914 203 aa9.09□□□□□ -0.95
PSEN1-216ENST00000556066 CABP4P57796 275 aa9.09□□□□□ -0.95
PSEN1-216ENST00000556066 ITPK1Q13572 414 aa9.09□□□□□ -0.95
PSEN1-216ENST00000556066 AMOTQ4VCS5 1084 aa9.09□□□□□ -0.95
PSEN1-216ENST00000556066 C1orf141Q5JVX7 400 aa9.09□□□□□ -0.95
PSEN1-216ENST00000556066 CC2D1BQ5T0F9 858 aaKnown RBP9.09□□□□□ -0.95
PSEN1-216ENST00000556066 DCAF5Q96JK2 942 aa9.09□□□□□ -0.95
PSEN1-216ENST00000556066 ATG3Q9NT62 314 aa9.09□□□□□ -0.95
PSEN1-216ENST00000556066 ERVV-2B6SEH9 535 aa9.08□□□□□ -0.96
PSEN1-216ENST00000556066 SCN11AQ9UI33 1791 aa9.08□□□□□ -0.96
PSEN1-216ENST00000556066 PLEKHG2Q9H7P9 1386 aa9.08□□□□□ -0.96
PSEN1-216ENST00000556066 KDM6AO15550 1401 aaPredicted RBP9.07□□□□□ -0.96
PSEN1-216ENST00000556066 SSFA2P28290 1259 aa9.07□□□□□ -0.96
PSEN1-216ENST00000556066 IL13P35225 146 aa9.07□□□□□ -0.96
PSEN1-216ENST00000556066 COL5A3P25940 1745 aaPredicted RBP9.07□□□□□ -0.96
PSEN1-216ENST00000556066 MYH14Q7Z406 1995 aaKnown RBP9.06□□□□□ -0.96
PSEN1-216ENST00000556066 GTPBP6O43824 516 aaPredicted RBP9.06□□□□□ -0.96
PSEN1-216ENST00000556066 GRIN3BO60391 1043 aa9.06□□□□□ -0.96
PSEN1-216ENST00000556066 PTCD1O75127 700 aaKnown RBP9.06□□□□□ -0.96
PSEN1-216ENST00000556066 HMOX1P09601 288 aa9.06□□□□□ -0.96
PSEN1-216ENST00000556066 ERICH6Q7L0X2 663 aa9.06□□□□□ -0.96
PSEN1-216ENST00000556066 NFATC2IPQ8NCF5 419 aa9.06□□□□□ -0.96
PSEN1-216ENST00000556066 WWC3Q9ULE0 1092 aa9.06□□□□□ -0.96
PSEN1-216ENST00000556066 RTCBQ9Y3I0 505 aaKnown RBP9.06□□□□□ -0.96
PSEN1-216ENST00000556066 CD2APQ9Y5K6 639 aa9.06□□□□□ -0.96
PSEN1-216ENST00000556066 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
PSEN1-216ENST00000556066 ZNF831Q5JPB2 1677 aa9.05□□□□□ -0.96
PSEN1-216ENST00000556066 KDRP35968 1356 aa9.05□□□□□ -0.96
PSEN1-216ENST00000556066 PER1O15534 1290 aaPredicted RBP9.05□□□□□ -0.96
PSEN1-216ENST00000556066 TRAPPC3LQ5T215 181 aa9.05□□□□□ -0.96
PSEN1-216ENST00000556066 HOMEZQ8IX15 550 aa9.05□□□□□ -0.96
PSEN1-216ENST00000556066 SLC4A9Q96Q91 983 aa9.05□□□□□ -0.96
PSEN1-216ENST00000556066 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms