RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ADAMTS7Q9UKP4 1686 aa10.42□□□□□ -0.74
PTCSC3-201ENST00000556013 IL6STP40189 918 aaPredicted RBP10.42□□□□□ -0.74
PTCSC3-201ENST00000556013 DDR1Q08345 913 aa10.42□□□□□ -0.74
PTCSC3-201ENST00000556013 DALRD3Q5D0E6 543 aaKnown RBP10.42□□□□□ -0.74
PTCSC3-201ENST00000556013 ARHGAP27Q6ZUM4 889 aa10.42□□□□□ -0.74
PTCSC3-201ENST00000556013 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
PTCSC3-201ENST00000556013 RSPH6AQ9H0K4 717 aa10.42□□□□□ -0.74
PTCSC3-201ENST00000556013 ZBTB1Q9Y2K1 713 aa10.42□□□□□ -0.74
PTCSC3-201ENST00000556013 HEG1Q9ULI3 1381 aa10.41□□□□□ -0.74
PTCSC3-201ENST00000556013 RGL2O15211 777 aa10.41□□□□□ -0.74
PTCSC3-201ENST00000556013 PPP2R1AP30153 589 aa10.41□□□□□ -0.74
PTCSC3-201ENST00000556013 NFIXQ14938 502 aa10.41□□□□□ -0.74
PTCSC3-201ENST00000556013 ZNF496Q96IT1 587 aaPredicted RBP10.41□□□□□ -0.74
PTCSC3-201ENST00000556013 BCL2L12Q9HB09 334 aa10.41□□□□□ -0.74
PTCSC3-201ENST00000556013 C4AP0C0L4 1744 aa10.41□□□□□ -0.74
PTCSC3-201ENST00000556013 COL15A1P39059 1388 aa10.4□□□□□ -0.74
PTCSC3-201ENST00000556013 BTBD11A6QL63 1104 aa10.4□□□□□ -0.74
PTCSC3-201ENST00000556013 SERPINB2P05120 415 aa10.4□□□□□ -0.74
PTCSC3-201ENST00000556013 PRKAR2BP31323 418 aa10.4□□□□□ -0.74
PTCSC3-201ENST00000556013 NPM2Q86SE8 214 aaKnown RBP10.4□□□□□ -0.74
PTCSC3-201ENST00000556013 PHACTR3Q96KR7 559 aa10.4□□□□□ -0.74
PTCSC3-201ENST00000556013 KCPQ6ZWJ8 1503 aa10.39□□□□□ -0.75
PTCSC3-201ENST00000556013 KIF3CO14782 793 aa10.39□□□□□ -0.75
PTCSC3-201ENST00000556013 TOMM70O94826 608 aa10.39□□□□□ -0.75
PTCSC3-201ENST00000556013 U2AF1L5P0DN76 240 aaPredicted RBP10.39□□□□□ -0.75
PTCSC3-201ENST00000556013 CANXP27824 592 aaKnown RBP10.39□□□□□ -0.75
PTCSC3-201ENST00000556013 U2AF1Q01081 240 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTCSC3-201ENST00000556013 CLEC4GQ6UXB4 293 aa10.39□□□□□ -0.75
PTCSC3-201ENST00000556013 RTF1Q92541 710 aaKnown RBP10.39□□□□□ -0.75
PTCSC3-201ENST00000556013 PNNQ9H307 717 aaKnown RBP10.39□□□□□ -0.75
PTCSC3-201ENST00000556013 WWC3Q9ULE0 1092 aa10.39□□□□□ -0.75
PTCSC3-201ENST00000556013 ZC3H4Q9UPT8 1303 aaKnown RBP10.38□□□□□ -0.75
PTCSC3-201ENST00000556013 HSPA6P17066 643 aa10.38□□□□□ -0.75
PTCSC3-201ENST00000556013 TJP1Q07157 1748 aa10.38□□□□□ -0.75
PTCSC3-201ENST00000556013 H0YIN7 160 aa10.37□□□□□ -0.75
PTCSC3-201ENST00000556013 NEFMP07197 916 aa10.37□□□□□ -0.75
PTCSC3-201ENST00000556013 SNRPA1P09661 255 aaKnown RBP10.37□□□□□ -0.75
PTCSC3-201ENST00000556013 PDE6BP35913 854 aa10.37□□□□□ -0.75
PTCSC3-201ENST00000556013 TAF7Q15545 349 aaPredicted RBP10.37□□□□□ -0.75
PTCSC3-201ENST00000556013 TTLL6Q8N841 843 aa10.37□□□□□ -0.75
PTCSC3-201ENST00000556013 BRIP1Q9BX63 1249 aa10.37□□□□□ -0.75
PTCSC3-201ENST00000556013 KIAA1551Q9HCM1 1747 aa10.36□□□□□ -0.75
PTCSC3-201ENST00000556013 CHRNA5P30532 468 aa10.36□□□□□ -0.75
PTCSC3-201ENST00000556013 C9orf131Q5VYM1 1079 aa10.36□□□□□ -0.75
PTCSC3-201ENST00000556013 PNISRQ8TF01 805 aaKnown RBP10.36□□□□□ -0.75
PTCSC3-201ENST00000556013 SETDB2Q96T68 719 aa10.36□□□□□ -0.75
PTCSC3-201ENST00000556013 USP16Q9Y5T5 823 aa10.36□□□□□ -0.75
PTCSC3-201ENST00000556013 KDM2BQ8NHM5 1336 aa10.35□□□□□ -0.75
PTCSC3-201ENST00000556013 A1BGP04217 495 aa10.35□□□□□ -0.75
PTCSC3-201ENST00000556013 CNGB1Q14028 1251 aaPredicted RBP10.35□□□□□ -0.75
PTCSC3-201ENST00000556013 ZNF526Q8TF50 670 aaPredicted RBP10.35□□□□□ -0.75
PTCSC3-201ENST00000556013 TBC1D2BQ9UPU7 963 aa10.35□□□□□ -0.75
PTCSC3-201ENST00000556013 N4BP2Q86UW6 1770 aaPredicted RBP10.34□□□□□ -0.75
PTCSC3-201ENST00000556013 KCNQ3O43525 872 aa10.34□□□□□ -0.75
PTCSC3-201ENST00000556013 CAMTA2O94983 1202 aa10.34□□□□□ -0.75
PTCSC3-201ENST00000556013 LMNB1P20700 586 aa10.34□□□□□ -0.75
PTCSC3-201ENST00000556013 TBC1D9BQ66K14 1250 aa10.34□□□□□ -0.75
PTCSC3-201ENST00000556013 C2CD5Q86YS7 1000 aa10.34□□□□□ -0.75
PTCSC3-201ENST00000556013 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
PTCSC3-201ENST00000556013 UBR2Q8IWV8 1755 aa10.34□□□□□ -0.75
PTCSC3-201ENST00000556013 BRCA1P38398 1863 aaKnown RBP10.34□□□□□ -0.75
PTCSC3-201ENST00000556013 ARFGEF1Q9Y6D6 1849 aa10.33□□□□□ -0.76
PTCSC3-201ENST00000556013 APLP1P51693 650 aa10.33□□□□□ -0.76
PTCSC3-201ENST00000556013 FSTL1Q12841 308 aa10.33□□□□□ -0.76
PTCSC3-201ENST00000556013 PRR5LQ6MZQ0 368 aa10.33□□□□□ -0.76
PTCSC3-201ENST00000556013 DZIP3Q86Y13 1208 aaKnown RBP10.33□□□□□ -0.76
PTCSC3-201ENST00000556013 CNKSR1Q969H4 720 aa10.33□□□□□ -0.76
PTCSC3-201ENST00000556013 RNF181Q9P0P0 153 aa10.33□□□□□ -0.76
PTCSC3-201ENST00000556013 ZNF652Q9Y2D9 606 aa10.33□□□□□ -0.76
PTCSC3-201ENST00000556013 CARMIL3Q8ND23 1372 aa10.33□□□□□ -0.76
PTCSC3-201ENST00000556013 NRXN2Q9P2S2 1712 aa10.33□□□□□ -0.76
PTCSC3-201ENST00000556013 KLRG2A4D1S0 409 aaPredicted RBP10.32□□□□□ -0.76
PTCSC3-201ENST00000556013 RALBP1Q15311 655 aa10.32□□□□□ -0.76
PTCSC3-201ENST00000556013 SOGA3Q5TF21 947 aa10.32□□□□□ -0.76
PTCSC3-201ENST00000556013 STYK1Q6J9G0 422 aa10.32□□□□□ -0.76
PTCSC3-201ENST00000556013 TPTE2Q6XPS3 522 aa10.32□□□□□ -0.76
PTCSC3-201ENST00000556013 BICDL1Q6ZP65 573 aa10.32□□□□□ -0.76
PTCSC3-201ENST00000556013 MCM10Q7L590 875 aa10.32□□□□□ -0.76
PTCSC3-201ENST00000556013 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
PTCSC3-201ENST00000556013 BABAM1Q9NWV8 329 aa10.32□□□□□ -0.76
PTCSC3-201ENST00000556013 VIRMAQ69YN4 1812 aaKnown RBP10.32□□□□□ -0.76
PTCSC3-201ENST00000556013 GLTPD2A6NH11 291 aa10.31□□□□□ -0.76
PTCSC3-201ENST00000556013 ST5P78524 1137 aa10.31□□□□□ -0.76
PTCSC3-201ENST00000556013 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
PTCSC3-201ENST00000556013 C16orf71Q8IYS4 520 aaPredicted RBP10.31□□□□□ -0.76
PTCSC3-201ENST00000556013 MASTLQ96GX5 879 aa10.31□□□□□ -0.76
PTCSC3-201ENST00000556013 NMRK2Q9NPI5 230 aa10.31□□□□□ -0.76
PTCSC3-201ENST00000556013 SIPA1L3O60292 1781 aaPredicted RBP10.3□□□□□ -0.76
PTCSC3-201ENST00000556013 ERVV-1B6SEH8 477 aa10.3□□□□□ -0.76
PTCSC3-201ENST00000556013 SRGNP10124 158 aa10.3□□□□□ -0.76
PTCSC3-201ENST00000556013 VEGFAP15692 232 aaPredicted RBP10.3□□□□□ -0.76
PTCSC3-201ENST00000556013 DCTN1Q14203 1278 aa10.3□□□□□ -0.76
PTCSC3-201ENST00000556013 NFE2L2Q16236 605 aa10.3□□□□□ -0.76
PTCSC3-201ENST00000556013 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
PTCSC3-201ENST00000556013 ZNF622Q969S3 477 aaKnown RBP eCLIP10.3□□□□□ -0.76
PTCSC3-201ENST00000556013 ZNF330Q9Y3S2 320 aaPredicted RBP10.3□□□□□ -0.76
PTCSC3-201ENST00000556013 LTBP3Q9NS15 1303 aa10.3□□□□□ -0.76
PTCSC3-201ENST00000556013 CEP350Q5VT06 3117 aa10.29□□□□□ -0.76
PTCSC3-201ENST00000556013 AFDNP55196 1824 aaKnown RBP10.29□□□□□ -0.76
PTCSC3-201ENST00000556013 NBPF26B4DH59 902 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms