RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 LMO7Q8WWI1 1683 aa8.69□□□□□ -1.02
PSEN1-214ENST00000555867 DDB1Q16531 1140 aa8.69□□□□□ -1.02
PSEN1-214ENST00000555867 NYAP1Q6ZVC0 841 aa8.69□□□□□ -1.02
PSEN1-214ENST00000555867 TMC1Q8TDI8 760 aa8.69□□□□□ -1.02
PSEN1-214ENST00000555867 GPBP1L1Q9HC44 474 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-214ENST00000555867 POGKQ9P215 609 aa8.69□□□□□ -1.02
PSEN1-214ENST00000555867 MINK1Q8N4C8 1332 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-214ENST00000555867 SOWAHBA6NEL2 793 aa8.68□□□□□ -1.02
PSEN1-214ENST00000555867 ZNF827Q17R98 1081 aa8.68□□□□□ -1.02
PSEN1-214ENST00000555867 FAM9BQ8IZU0 186 aa8.68□□□□□ -1.02
PSEN1-214ENST00000555867 ZNF526Q8TF50 670 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-214ENST00000555867 LRRC37A3O60309 1634 aa8.68□□□□□ -1.02
PSEN1-214ENST00000555867 ARHGEF28Q8N1W1 1705 aaKnown RBP8.68□□□□□ -1.02
PSEN1-214ENST00000555867 WASLO00401 505 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-214ENST00000555867 BCL9O00512 1426 aa8.67□□□□□ -1.02
PSEN1-214ENST00000555867 ADGRB1O14514 1584 aa8.67□□□□□ -1.02
PSEN1-214ENST00000555867 CPDO75976 1380 aa8.67□□□□□ -1.02
PSEN1-214ENST00000555867 COL5A2P05997 1499 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-214ENST00000555867 BCAMP50895 628 aa8.67□□□□□ -1.02
PSEN1-214ENST00000555867 EPAS1Q99814 870 aa8.67□□□□□ -1.02
PSEN1-214ENST00000555867 CRB1P82279 1406 aa8.66□□□□□ -1.02
PSEN1-214ENST00000555867 AATKQ6ZMQ8 1374 aa8.66□□□□□ -1.02
PSEN1-214ENST00000555867 PER1O15534 1290 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-214ENST00000555867 PRELPP51888 382 aa8.66□□□□□ -1.02
PSEN1-214ENST00000555867 ZFRQ96KR1 1074 aaKnown RBP8.66□□□□□ -1.02
PSEN1-214ENST00000555867 KIAA1468Q9P260 1216 aa8.66□□□□□ -1.02
PSEN1-214ENST00000555867 TULP4Q9NRJ4 1543 aa8.65□□□□□ -1.02
PSEN1-214ENST00000555867 SMG6Q86US8 1419 aaKnown RBP8.65□□□□□ -1.02
PSEN1-214ENST00000555867 ADCY9O60503 1353 aa8.65□□□□□ -1.02
PSEN1-214ENST00000555867 PCNTO95613 3336 aa8.65□□□□□ -1.02
PSEN1-214ENST00000555867 GRIN3BO60391 1043 aa8.65□□□□□ -1.02
PSEN1-214ENST00000555867 GCP02774 474 aa8.65□□□□□ -1.02
PSEN1-214ENST00000555867 CCDC184Q52MB2 194 aa8.65□□□□□ -1.02
PSEN1-214ENST00000555867 PNISRQ8TF01 805 aaKnown RBP8.65□□□□□ -1.02
PSEN1-214ENST00000555867 PUS7Q96PZ0 661 aaKnown RBP8.65□□□□□ -1.02
PSEN1-214ENST00000555867 LRRC4BQ9NT99 713 aa8.65□□□□□ -1.02
PSEN1-214ENST00000555867 TRAK1Q9UPV9 953 aa8.65□□□□□ -1.02
PSEN1-214ENST00000555867 PAPPAQ13219 1627 aa8.65□□□□□ -1.03
PSEN1-214ENST00000555867 USP19O94966 1318 aa8.64□□□□□ -1.03
PSEN1-214ENST00000555867 C6orf132Q5T0Z8 1188 aa8.64□□□□□ -1.03
PSEN1-214ENST00000555867 ABTB2Q8N961 1025 aa8.64□□□□□ -1.03
PSEN1-214ENST00000555867 NUDT16Q96DE0 195 aaKnown RBP8.64□□□□□ -1.03
PSEN1-214ENST00000555867 KNSTRNQ9Y448 316 aa8.64□□□□□ -1.03
PSEN1-214ENST00000555867 COL24A1Q17RW2 1714 aa8.63□□□□□ -1.03
PSEN1-214ENST00000555867 CENPJQ9HC77 1338 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-214ENST00000555867 POLD1P28340 1107 aa8.63□□□□□ -1.03
PSEN1-214ENST00000555867 APLP1P51693 650 aa8.63□□□□□ -1.03
PSEN1-214ENST00000555867 CAMK2BQ13554 666 aa8.63□□□□□ -1.03
PSEN1-214ENST00000555867 TOM1L2Q6ZVM7 507 aa8.63□□□□□ -1.03
PSEN1-214ENST00000555867 ACSBG1Q96GR2 724 aa8.63□□□□□ -1.03
PSEN1-214ENST00000555867 PANK3Q9H999 370 aa8.63□□□□□ -1.03
PSEN1-214ENST00000555867 AKAP12Q02952 1782 aa8.63□□□□□ -1.03
PSEN1-214ENST00000555867 ACEP12821 1306 aa8.62□□□□□ -1.03
PSEN1-214ENST00000555867 PNPLA7Q6ZV29 1317 aa8.62□□□□□ -1.03
PSEN1-214ENST00000555867 ZBTB7CA1YPR0 619 aa8.62□□□□□ -1.03
PSEN1-214ENST00000555867 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
PSEN1-214ENST00000555867 HTRA3P83110 453 aa8.62□□□□□ -1.03
PSEN1-214ENST00000555867 KCNC4Q03721 635 aa8.62□□□□□ -1.03
PSEN1-214ENST00000555867 TNS4Q8IZW8 715 aa8.62□□□□□ -1.03
PSEN1-214ENST00000555867 SLC16A10Q8TF71 515 aa8.62□□□□□ -1.03
PSEN1-214ENST00000555867 WBP1LQ9NX94 342 aa8.61□□□□□ -1.03
PSEN1-214ENST00000555867 SEPT9Q9UHD8 586 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-214ENST00000555867 NUDCQ9Y266 331 aa8.61□□□□□ -1.03
PSEN1-214ENST00000555867 POLR3AO14802 1390 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-214ENST00000555867 TOPAZ1Q8N9V7 1692 aa8.6□□□□□ -1.03
PSEN1-214ENST00000555867 WNK3Q9BYP7 1800 aa8.6□□□□□ -1.03
PSEN1-214ENST00000555867 DPYSL4O14531 572 aa8.6□□□□□ -1.03
PSEN1-214ENST00000555867 KCNQ4P56696 695 aa8.6□□□□□ -1.03
PSEN1-214ENST00000555867 COL18A1P39060 1754 aa8.6□□□□□ -1.03
PSEN1-214ENST00000555867 EXOC5O00471 708 aa8.59□□□□□ -1.03
PSEN1-214ENST00000555867 JMYQ8N9B5 988 aa8.59□□□□□ -1.03
PSEN1-214ENST00000555867 CDCA7Q9BWT1 371 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-214ENST00000555867 CDK19Q9BWU1 502 aa8.59□□□□□ -1.03
PSEN1-214ENST00000555867 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-214ENST00000555867 ANKRD26Q9UPS8 1709 aa8.59□□□□□ -1.03
PSEN1-214ENST00000555867 NSD2O96028 1365 aa8.59□□□□□ -1.03
PSEN1-214ENST00000555867 TUBGCP6Q96RT7 1819 aa8.59□□□□□ -1.03
PSEN1-214ENST00000555867 WDR17Q8IZU2 1322 aa8.58□□□□□ -1.04
PSEN1-214ENST00000555867 PLEKHG3A1L390 1219 aa8.58□□□□□ -1.04
PSEN1-214ENST00000555867 AMER1Q5JTC6 1135 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-214ENST00000555867 NGEFQ8N5V2 710 aa8.58□□□□□ -1.04
PSEN1-214ENST00000555867 KLRG1Q96E93 195 aa8.58□□□□□ -1.04
PSEN1-214ENST00000555867 LRCH3Q96II8 777 aa8.58□□□□□ -1.04
PSEN1-214ENST00000555867 TSR3Q9UJK0 312 aaKnown RBP8.58□□□□□ -1.04
PSEN1-214ENST00000555867 WWC3Q9ULE0 1092 aa8.58□□□□□ -1.04
PSEN1-214ENST00000555867 BTAF1O14981 1849 aa8.58□□□□□ -1.04
PSEN1-214ENST00000555867 RGPD5Q99666 1765 aa8.58□□□□□ -1.04
PSEN1-214ENST00000555867 ITSN1Q15811 1721 aa8.57□□□□□ -1.04
PSEN1-214ENST00000555867 EVC2Q86UK5 1308 aa8.57□□□□□ -1.04
PSEN1-214ENST00000555867 USP6P35125 1406 aa8.57□□□□□ -1.04
PSEN1-214ENST00000555867 NHSQ6T4R5 1651 aa8.57□□□□□ -1.04
PSEN1-214ENST00000555867 CC2D1BQ5T0F9 858 aaKnown RBP8.57□□□□□ -1.04
PSEN1-214ENST00000555867 CARD10Q9BWT7 1032 aa8.57□□□□□ -1.04
PSEN1-214ENST00000555867 TFCP2L1Q9NZI6 479 aa8.57□□□□□ -1.04
PSEN1-214ENST00000555867 HPS5Q9UPZ3 1129 aa8.57□□□□□ -1.04
PSEN1-214ENST00000555867 QSER1Q2KHR3 1735 aa8.57□□□□□ -1.04
PSEN1-214ENST00000555867 TOMM70O94826 608 aa8.56□□□□□ -1.04
PSEN1-214ENST00000555867 MSL1Q68DK7 614 aa8.56□□□□□ -1.04
PSEN1-214ENST00000555867 Q6ZNB5 142 aa8.56□□□□□ -1.04
PSEN1-214ENST00000555867 PPP4R2Q9NY27 417 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms