RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 ADGBQ8N7X0 1667 aa6.43□□□□□ -1.38
CPSF2-204ENST00000555244 TSPY4P0CV99 314 aa6.43□□□□□ -1.38
CPSF2-204ENST00000555244 TSPY10P0CW01 314 aa6.43□□□□□ -1.38
CPSF2-204ENST00000555244 SKIP12755 728 aa6.43□□□□□ -1.38
CPSF2-204ENST00000555244 CFAP70Q5T0N1 1121 aa6.43□□□□□ -1.38
CPSF2-204ENST00000555244 TBC1D9Q6ZT07 1266 aa6.43□□□□□ -1.38
CPSF2-204ENST00000555244 CCDC125Q86Z20 511 aa6.43□□□□□ -1.38
CPSF2-204ENST00000555244 TRMT44Q8IYL2 757 aaKnown RBP6.43□□□□□ -1.38
CPSF2-204ENST00000555244 PBXIP1Q96AQ6 731 aa6.43□□□□□ -1.38
CPSF2-204ENST00000555244 C1QTNF2Q9BXJ5 285 aa6.43□□□□□ -1.38
CPSF2-204ENST00000555244 MAFBQ9Y5Q3 323 aaPredicted RBP6.43□□□□□ -1.38
CPSF2-204ENST00000555244 ZMYM3Q14202 1370 aa6.43□□□□□ -1.38
CPSF2-204ENST00000555244 MROH2AA6NES4 1674 aa6.42□□□□□ -1.38
CPSF2-204ENST00000555244 TCOF1Q13428 1488 aaKnown RBP6.42□□□□□ -1.38
CPSF2-204ENST00000555244 LZTS3O60299 673 aaPredicted RBP6.42□□□□□ -1.38
CPSF2-204ENST00000555244 MAP7D1Q3KQU3 841 aa6.42□□□□□ -1.38
CPSF2-204ENST00000555244 C4orf48Q5BLP8 95 aa6.42□□□□□ -1.38
CPSF2-204ENST00000555244 TRIM52Q96A61 297 aa6.42□□□□□ -1.38
CPSF2-204ENST00000555244 TRIM47Q96LD4 638 aa6.42□□□□□ -1.38
CPSF2-204ENST00000555244 SENP2Q9HC62 589 aa6.42□□□□□ -1.38
CPSF2-204ENST00000555244 SHANK2Q9UPX8 1470 aa6.41□□□□□ -1.38
CPSF2-204ENST00000555244 CEBPAP49715 358 aaPredicted RBP6.41□□□□□ -1.38
CPSF2-204ENST00000555244 PDE4CQ08493 712 aa6.41□□□□□ -1.38
CPSF2-204ENST00000555244 TRIM46Q7Z4K8 759 aa6.41□□□□□ -1.38
CPSF2-204ENST00000555244 SEPT12Q8IYM1 358 aa6.41□□□□□ -1.38
CPSF2-204ENST00000555244 PLPP7Q8NBV4 271 aa6.41□□□□□ -1.38
CPSF2-204ENST00000555244 MAP4K5Q9Y4K4 846 aa6.41□□□□□ -1.38
CPSF2-204ENST00000555244 ABCC5O15440 1437 aa6.41□□□□□ -1.38
CPSF2-204ENST00000555244 C3P01024 1663 aa6.4□□□□□ -1.38
CPSF2-204ENST00000555244 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.4□□□□□ -1.38
CPSF2-204ENST00000555244 USP17L5A8MUK1 530 aa6.4□□□□□ -1.38
CPSF2-204ENST00000555244 PIK3CDO00329 1044 aa6.4□□□□□ -1.38
CPSF2-204ENST00000555244 ADH1CP00326 375 aa6.4□□□□□ -1.38
CPSF2-204ENST00000555244 WDR4P57081 412 aaKnown RBP6.4□□□□□ -1.38
CPSF2-204ENST00000555244 TREML4Q6UXN2 200 aa6.4□□□□□ -1.38
CPSF2-204ENST00000555244 VASH1Q7L8A9 365 aaPredicted RBP6.4□□□□□ -1.38
CPSF2-204ENST00000555244 PLEKHM2Q8IWE5 1019 aa6.4□□□□□ -1.38
CPSF2-204ENST00000555244 VRTNQ9H8Y1 702 aa6.4□□□□□ -1.38
CPSF2-204ENST00000555244 PTPRKQ15262 1439 aa6.4□□□□□ -1.39
CPSF2-204ENST00000555244 UHRF1BP1Q6BDS2 1440 aa6.4□□□□□ -1.39
CPSF2-204ENST00000555244 FGD6Q6ZV73 1430 aa6.4□□□□□ -1.39
CPSF2-204ENST00000555244 PREX1Q8TCU6 1659 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 USP17L3A6NCW0 530 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 USP17L4A6NCW7 530 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 EML3Q32P44 896 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 USP17L2Q6R6M4 530 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 USP17L1Q7RTZ2 530 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 PHTF2Q8N3S3 785 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 KIFC2Q96AC6 838 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 SIRT1Q96EB6 747 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 KCTD15Q96SI1 283 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-204ENST00000555244 ESF1Q9H501 851 aaKnown RBP6.39□□□□□ -1.39
CPSF2-204ENST00000555244 DOLKQ9UPQ8 538 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 KDM5DQ9BY66 1539 aa6.39□□□□□ -1.39
CPSF2-204ENST00000555244 KIF3BO15066 747 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 GIGYF1O75420 1035 aaPredicted RBP6.38□□□□□ -1.39
CPSF2-204ENST00000555244 WFS1O76024 890 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 ZIC2O95409 532 aaPredicted RBP6.38□□□□□ -1.39
CPSF2-204ENST00000555244 NR3C2P08235 984 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 PDIA4P13667 645 aaKnown RBP6.38□□□□□ -1.39
CPSF2-204ENST00000555244 TIMP2P16035 220 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 GGT6Q6P531 493 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 MPNDQ8N594 471 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 ZFP42Q96MM3 310 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 CDK15Q96Q40 435 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 ZFAND3Q9H8U3 227 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.38□□□□□ -1.39
CPSF2-204ENST00000555244 DUOX2Q9NRD8 1548 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 RNF17Q9BXT8 1623 aaKnown RBP6.38□□□□□ -1.39
CPSF2-204ENST00000555244 PTPN23Q9H3S7 1636 aa6.38□□□□□ -1.39
CPSF2-204ENST00000555244 EIF2AK4Q9P2K8 1649 aaKnown RBP6.38□□□□□ -1.39
CPSF2-204ENST00000555244 ADGRL2O95490 1459 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 PZPP20742 1482 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 PTPRTO14522 1441 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 DAPK1P53355 1430 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 NCOA1Q15788 1441 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 ERBINQ96RT1 1412 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 ESPNB1AK53 854 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 ATP5J2-PTCD1G3V325 749 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 CSB-PGBD3P0DP91 1061 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 FSHRP23945 695 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 HSPA2P54652 639 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 NCOA4Q13772 614 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 ITPKCQ96DU7 683 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 PURBQ96QR8 312 aaKnown RBP6.37□□□□□ -1.39
CPSF2-204ENST00000555244 CHIC2Q9UKJ5 165 aa6.37□□□□□ -1.39
CPSF2-204ENST00000555244 DNMT1P26358 1616 aaKnown RBP6.36□□□□□ -1.39
CPSF2-204ENST00000555244 PLA2R1Q13018 1463 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 ARHGAP31Q2M1Z3 1444 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 WASHC2CQ9Y4E1 1318 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 ATG7O95352 703 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 GRM5P41594 1212 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 SRPK2P78362 688 aaKnown RBP6.36□□□□□ -1.39
CPSF2-204ENST00000555244 DHX9Q08211 1270 aaKnown RBP6.36□□□□□ -1.39
CPSF2-204ENST00000555244 USP4Q13107 963 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 OXLD1Q5BKU9 147 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 MRPL14Q6P1L8 145 aaKnown RBP6.36□□□□□ -1.39
CPSF2-204ENST00000555244 TRIM50Q86XT4 487 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 DEPDC4Q8N2C3 294 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 MKRN1Q9UHC7 482 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms