RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 KRT27Q7Z3Y8 459 aa8.26□□□□□ -1.09
PRKCH-214ENST00000555233 IL17REQ8NFR9 667 aa8.26□□□□□ -1.09
PRKCH-214ENST00000555233 TRIM35Q9UPQ4 493 aa8.26□□□□□ -1.09
PRKCH-214ENST00000555233 PCDH11XQ9BZA7 1347 aa8.26□□□□□ -1.09
PRKCH-214ENST00000555233 PCDH11YQ9BZA8 1340 aa8.26□□□□□ -1.09
PRKCH-214ENST00000555233 BCORQ6W2J9 1755 aa8.25□□□□□ -1.09
PRKCH-214ENST00000555233 HEG1Q9ULI3 1381 aa8.25□□□□□ -1.09
PRKCH-214ENST00000555233 U2SURPO15042 1029 aaKnown RBP8.25□□□□□ -1.09
PRKCH-214ENST00000555233 GALR2O43603 387 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-214ENST00000555233 U2AF1L5P0DN76 240 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-214ENST00000555233 TATP17735 454 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-214ENST00000555233 MNX1P50219 401 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-214ENST00000555233 U2AF1Q01081 240 aaKnown RBP eCLIP8.25□□□□□ -1.09
PRKCH-214ENST00000555233 AK7Q96M32 723 aa8.25□□□□□ -1.09
PRKCH-214ENST00000555233 SLC4A9Q96Q91 983 aa8.25□□□□□ -1.09
PRKCH-214ENST00000555233 LGR6Q9HBX8 967 aa8.25□□□□□ -1.09
PRKCH-214ENST00000555233 MRS2Q9HD23 443 aa8.25□□□□□ -1.09
PRKCH-214ENST00000555233 CACNA1FO60840 1977 aa8.24□□□□□ -1.09
PRKCH-214ENST00000555233 MMRN1Q13201 1228 aa8.24□□□□□ -1.09
PRKCH-214ENST00000555233 PDAP1Q13442 181 aaKnown RBP8.24□□□□□ -1.09
PRKCH-214ENST00000555233 RAPGEF4Q8WZA2 1011 aa8.24□□□□□ -1.09
PRKCH-214ENST00000555233 UPF1Q92900 1129 aaKnown RBP eCLIP8.24□□□□□ -1.09
PRKCH-214ENST00000555233 CFAP53Q96M91 514 aa8.24□□□□□ -1.09
PRKCH-214ENST00000555233 GPBP1L1Q9HC44 474 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-214ENST00000555233 CCDC9Q9Y3X0 531 aaKnown RBP8.24□□□□□ -1.09
PRKCH-214ENST00000555233 N4BP2Q86UW6 1770 aaPredicted RBP8.23□□□□□ -1.09
PRKCH-214ENST00000555233 TMPOP42166 694 aaKnown RBP8.23□□□□□ -1.09
PRKCH-214ENST00000555233 NFE2L2Q16236 605 aa8.23□□□□□ -1.09
PRKCH-214ENST00000555233 ZNF530Q6P9A1 599 aaPredicted RBP8.23□□□□□ -1.09
PRKCH-214ENST00000555233 CCDC146Q8IYE0 955 aa8.23□□□□□ -1.09
PRKCH-214ENST00000555233 SCN7AQ01118 1682 aa8.23□□□□□ -1.09
PRKCH-214ENST00000555233 EXOC5O00471 708 aa8.22□□□□□ -1.09
PRKCH-214ENST00000555233 RNMTO43148 476 aaKnown RBP8.22□□□□□ -1.09
PRKCH-214ENST00000555233 DCTN1Q14203 1278 aa8.22□□□□□ -1.09
PRKCH-214ENST00000555233 AMOTQ4VCS5 1084 aa8.22□□□□□ -1.09
PRKCH-214ENST00000555233 AKAP4Q5JQC9 854 aa8.22□□□□□ -1.09
PRKCH-214ENST00000555233 IL27Q8NEV9 243 aa8.22□□□□□ -1.09
PRKCH-214ENST00000555233 PIGBQ92521 554 aa8.22□□□□□ -1.09
PRKCH-214ENST00000555233 RUNDC1Q96C34 613 aa8.22□□□□□ -1.09
PRKCH-214ENST00000555233 THUMPD2Q9BTF0 503 aaKnown RBP8.22□□□□□ -1.09
PRKCH-214ENST00000555233 MFRPQ9BY79 579 aa8.22□□□□□ -1.09
PRKCH-214ENST00000555233 APAF1O14727 1248 aa8.21□□□□□ -1.1
PRKCH-214ENST00000555233 ZNF853P0CG23 659 aa8.21□□□□□ -1.1
PRKCH-214ENST00000555233 PLEKHO1Q53GL0 409 aaPredicted RBP8.21□□□□□ -1.1
PRKCH-214ENST00000555233 MPRIPQ6WCQ1 1025 aa8.21□□□□□ -1.1
PRKCH-214ENST00000555233 IFNL2Q8IZJ0 200 aa8.21□□□□□ -1.1
PRKCH-214ENST00000555233 CAMKK2Q96RR4 588 aa8.21□□□□□ -1.1
PRKCH-214ENST00000555233 NUDCQ9Y266 331 aa8.21□□□□□ -1.1
PRKCH-214ENST00000555233 KIAA1551Q9HCM1 1747 aa8.2□□□□□ -1.1
PRKCH-214ENST00000555233 ANKRD36CQ5JPF3 1778 aa8.2□□□□□ -1.1
PRKCH-214ENST00000555233 KCNQ3O43525 872 aa8.2□□□□□ -1.1
PRKCH-214ENST00000555233 POTEJP0CG39 1038 aa8.2□□□□□ -1.1
PRKCH-214ENST00000555233 PRIM1P49642 420 aaKnown RBP8.2□□□□□ -1.1
PRKCH-214ENST00000555233 FAM196AQ6ZSG2 479 aa8.2□□□□□ -1.1
PRKCH-214ENST00000555233 AMIGO3Q86WK7 504 aa8.2□□□□□ -1.1
PRKCH-214ENST00000555233 KRI1Q8N9T8 703 aaKnown RBP8.2□□□□□ -1.1
PRKCH-214ENST00000555233 DDX54Q8TDD1 881 aaKnown RBP8.2□□□□□ -1.1
PRKCH-214ENST00000555233 DCAF5Q96JK2 942 aa8.2□□□□□ -1.1
PRKCH-214ENST00000555233 KDM4CQ9H3R0 1056 aa8.2□□□□□ -1.1
PRKCH-214ENST00000555233 LRRC4BQ9NT99 713 aa8.2□□□□□ -1.1
PRKCH-214ENST00000555233 SPG7Q9UQ90 795 aa8.2□□□□□ -1.1
PRKCH-214ENST00000555233 RRP7AQ9Y3A4 280 aaKnown RBP8.2□□□□□ -1.1
PRKCH-214ENST00000555233 NUP98P52948 1817 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 SENP3-EIF4A1A0A087X0R7 540 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 ERVV-2B6SEH9 535 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 HTATSF1O43719 755 aaKnown RBP8.19□□□□□ -1.1
PRKCH-214ENST00000555233 TRIM37O94972 964 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 CCDC27Q2M243 656 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 MCM10Q7L590 875 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 DEFB132Q7Z7B7 95 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 GPIHBP1Q8IV16 184 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 GAS2L2Q8NHY3 880 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 ACSBG1Q96GR2 724 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 SLC52A2Q9HAB3 445 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 SCUBE2Q9NQ36 999 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 ATG3Q9NT62 314 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 NRXN2Q9P2S2 1712 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 ARFGEF2Q9Y6D5 1785 aa8.19□□□□□ -1.1
PRKCH-214ENST00000555233 AFDNP55196 1824 aaKnown RBP8.18□□□□□ -1.1
PRKCH-214ENST00000555233 GNAT3A8MTJ3 354 aa8.18□□□□□ -1.1
PRKCH-214ENST00000555233 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
PRKCH-214ENST00000555233 ITPK1Q13572 414 aa8.18□□□□□ -1.1
PRKCH-214ENST00000555233 ANO8Q9HCE9 1232 aaPredicted RBP8.18□□□□□ -1.1
PRKCH-214ENST00000555233 ASAP1Q9ULH1 1129 aa8.18□□□□□ -1.1
PRKCH-214ENST00000555233 PALLDQ8WX93 1383 aa8.18□□□□□ -1.1
PRKCH-214ENST00000555233 KIF13BQ9NQT8 1826 aa8.17□□□□□ -1.1
PRKCH-214ENST00000555233 SRCAPQ6ZRS2 3230 aa8.17□□□□□ -1.1
PRKCH-214ENST00000555233 PLSCR1O15162 318 aa8.17□□□□□ -1.1
PRKCH-214ENST00000555233 LRP10Q7Z4F1 713 aa8.17□□□□□ -1.1
PRKCH-214ENST00000555233 WWC1Q8IX03 1113 aa8.17□□□□□ -1.1
PRKCH-214ENST00000555233 TRMT2AQ8IZ69 625 aaKnown RBP8.17□□□□□ -1.1
PRKCH-214ENST00000555233 METRNQ9UJH8 293 aa8.17□□□□□ -1.1
PRKCH-214ENST00000555233 CHL1O00533 1208 aa8.16□□□□□ -1.1
PRKCH-214ENST00000555233 SLC39A6Q13433 755 aa8.16□□□□□ -1.1
PRKCH-214ENST00000555233 WDR43Q15061 677 aaKnown RBP eCLIP8.16□□□□□ -1.1
PRKCH-214ENST00000555233 PELP1Q8IZL8 1130 aaKnown RBP8.16□□□□□ -1.1
PRKCH-214ENST00000555233 ANKRD31Q8N7Z5 1873 aa8.16□□□□□ -1.1
PRKCH-214ENST00000555233 NFATC2IPQ8NCF5 419 aa8.16□□□□□ -1.1
PRKCH-214ENST00000555233 BRCA1P38398 1863 aaKnown RBP8.15□□□□□ -1.1
PRKCH-214ENST00000555233 A0A0G2JS52 829 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms