RNA–Protein interactions for RNA: ENST00000555193.1

TGFB3-203, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-203ENST00000555193 MAP2K1Q02750 393 aaPredicted RBP20.45■□□□□ 0.86
TGFB3-203ENST00000555193 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
TGFB3-203ENST00000555193 TJP1Q07157 1748 aa20.44■□□□□ 0.86
TGFB3-203ENST00000555193 TM4SF1P30408 202 aa20.44■□□□□ 0.86
TGFB3-203ENST00000555193 CRKLP46109 303 aaKnown RBP20.44■□□□□ 0.86
TGFB3-203ENST00000555193 IFNL2Q8IZJ0 200 aa20.44■□□□□ 0.86
TGFB3-203ENST00000555193 WDR33Q9C0J8 1336 aaKnown RBP20.44■□□□□ 0.86
TGFB3-203ENST00000555193 NCAPD2Q15021 1401 aa20.44■□□□□ 0.86
TGFB3-203ENST00000555193 DEFB115Q30KQ5 88 aa20.43■□□□□ 0.86
TGFB3-203ENST00000555193 LDHDQ86WU2 507 aa20.43■□□□□ 0.86
TGFB3-203ENST00000555193 CASP8AP2Q9UKL3 1982 aa20.43■□□□□ 0.86
TGFB3-203ENST00000555193 RASSF10A6NK89 507 aa20.42■□□□□ 0.86
TGFB3-203ENST00000555193 ITGBL1O95965 494 aaPredicted RBP20.42■□□□□ 0.86
TGFB3-203ENST00000555193 C2CD5Q86YS7 1000 aa20.42■□□□□ 0.86
TGFB3-203ENST00000555193 TSKSQ9UJT2 592 aa20.42■□□□□ 0.86
TGFB3-203ENST00000555193 FYB1O15117 783 aa20.41■□□□□ 0.86
TGFB3-203ENST00000555193 THSD7BQ9C0I4 1608 aa20.41■□□□□ 0.86
TGFB3-203ENST00000555193 PTCD1O75127 700 aaKnown RBP20.4■□□□□ 0.86
TGFB3-203ENST00000555193 EAPPQ56P03 285 aaPredicted RBP20.4■□□□□ 0.86
TGFB3-203ENST00000555193 USPL1Q5W0Q7 1092 aa20.4■□□□□ 0.86
TGFB3-203ENST00000555193 ANKRD31Q8N7Z5 1873 aa20.4■□□□□ 0.86
TGFB3-203ENST00000555193 CARMIL3Q8ND23 1372 aa20.39■□□□□ 0.85
TGFB3-203ENST00000555193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.39■□□□□ 0.85
TGFB3-203ENST00000555193 ABT1Q9ULW3 272 aaKnown RBP20.39■□□□□ 0.85
TGFB3-203ENST00000555193 EMILIN1Q9Y6C2 1016 aa20.39■□□□□ 0.85
TGFB3-203ENST00000555193 ADAMTSL1Q8N6G6 1762 aa20.39■□□□□ 0.85
TGFB3-203ENST00000555193 COL11A2P13942 1736 aaPredicted RBP20.39■□□□□ 0.85
TGFB3-203ENST00000555193 C21orf2O43822 256 aa20.38■□□□□ 0.85
TGFB3-203ENST00000555193 NFIXQ14938 502 aa20.38■□□□□ 0.85
TGFB3-203ENST00000555193 CARD11Q9BXL7 1154 aa20.38■□□□□ 0.85
TGFB3-203ENST00000555193 MCOLN1Q9GZU1 580 aa20.38■□□□□ 0.85
TGFB3-203ENST00000555193 TAF1DQ9H5J8 278 aaPredicted RBP20.38■□□□□ 0.85
TGFB3-203ENST00000555193 CLEC11AQ9Y240 323 aa20.38■□□□□ 0.85
TGFB3-203ENST00000555193 KIF24Q5T7B8 1368 aa20.37■□□□□ 0.85
TGFB3-203ENST00000555193 TONSLQ96HA7 1378 aa20.37■□□□□ 0.85
TGFB3-203ENST00000555193 LTBP1Q14766 1721 aa20.37■□□□□ 0.85
TGFB3-203ENST00000555193 IQCA1LA6NCM1 817 aa20.37■□□□□ 0.85
TGFB3-203ENST00000555193 H0YIN7 160 aa20.37■□□□□ 0.85
TGFB3-203ENST00000555193 PPM1GO15355 546 aaPredicted RBP20.37■□□□□ 0.85
TGFB3-203ENST00000555193 ZPR1O75312 459 aa20.37■□□□□ 0.85
TGFB3-203ENST00000555193 GRM1Q13255 1194 aa20.37■□□□□ 0.85
TGFB3-203ENST00000555193 BEGAINQ9BUH8 593 aa20.37■□□□□ 0.85
TGFB3-203ENST00000555193 ANKRD26Q9UPS8 1709 aa20.36■□□□□ 0.85
TGFB3-203ENST00000555193 ERVV-2B6SEH9 535 aa20.35■□□□□ 0.85
TGFB3-203ENST00000555193 PAXIP1Q6ZW49 1069 aaPredicted RBP20.35■□□□□ 0.85
TGFB3-203ENST00000555193 PUS7Q96PZ0 661 aaKnown RBP20.35■□□□□ 0.85
TGFB3-203ENST00000555193 EYA1Q99502 592 aa20.35■□□□□ 0.85
TGFB3-203ENST00000555193 SERPINB2P05120 415 aa20.34■□□□□ 0.85
TGFB3-203ENST00000555193 ZNF622Q969S3 477 aaKnown RBP eCLIP20.34■□□□□ 0.85
TGFB3-203ENST00000555193 SLX4Q8IY92 1834 aa20.33■□□□□ 0.85
TGFB3-203ENST00000555193 MAP1SQ66K74 1059 aaPredicted RBP20.33■□□□□ 0.85
TGFB3-203ENST00000555193 INTS5Q6P9B9 1019 aaKnown RBP20.33■□□□□ 0.85
TGFB3-203ENST00000555193 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.85
TGFB3-203ENST00000555193 TAOK3Q9H2K8 898 aa20.33■□□□□ 0.85
TGFB3-203ENST00000555193 CABP4P57796 275 aa20.31■□□□□ 0.84
TGFB3-203ENST00000555193 CNTROBQ8N137 903 aa20.31■□□□□ 0.84
TGFB3-203ENST00000555193 L3MBTL3Q96JM7 780 aaPredicted RBP20.31■□□□□ 0.84
TGFB3-203ENST00000555193 CAPNS2Q96L46 248 aa20.31■□□□□ 0.84
TGFB3-203ENST00000555193 LTBP3Q9NS15 1303 aa20.29■□□□□ 0.84
TGFB3-203ENST00000555193 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
TGFB3-203ENST00000555193 CYP4F22Q6NT55 531 aa20.29■□□□□ 0.84
TGFB3-203ENST00000555193 GPR101Q96P66 508 aaPredicted RBP20.29■□□□□ 0.84
TGFB3-203ENST00000555193 TRPM7Q96QT4 1865 aa20.28■□□□□ 0.84
TGFB3-203ENST00000555193 DGKZQ13574 1117 aa20.28■□□□□ 0.84
TGFB3-203ENST00000555193 BICDL1Q6ZP65 573 aa20.28■□□□□ 0.84
TGFB3-203ENST00000555193 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
TGFB3-203ENST00000555193 ARFGEF2Q9Y6D5 1785 aa20.27■□□□□ 0.84
TGFB3-203ENST00000555193 EPHX2P34913 555 aa20.27■□□□□ 0.84
TGFB3-203ENST00000555193 CCDC24Q8N4L8 307 aa20.27■□□□□ 0.84
TGFB3-203ENST00000555193 BCL2L12Q9HB09 334 aa20.27■□□□□ 0.84
TGFB3-203ENST00000555193 HACL1Q9UJ83 578 aa20.27■□□□□ 0.84
TGFB3-203ENST00000555193 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.83
TGFB3-203ENST00000555193 COL15A1P39059 1388 aa20.26■□□□□ 0.83
TGFB3-203ENST00000555193 SOX10P56693 466 aa20.26■□□□□ 0.83
TGFB3-203ENST00000555193 FMR1Q06787 632 aaKnown RBP eCLIP20.26■□□□□ 0.83
TGFB3-203ENST00000555193 NARFQ9UHQ1 456 aa20.26■□□□□ 0.83
TGFB3-203ENST00000555193 AOC2O75106 756 aa20.25■□□□□ 0.83
TGFB3-203ENST00000555193 PRPF38BQ5VTL8 546 aaKnown RBP20.25■□□□□ 0.83
TGFB3-203ENST00000555193 DNAJC10Q8IXB1 793 aa20.25■□□□□ 0.83
TGFB3-203ENST00000555193 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
TGFB3-203ENST00000555193 HSP90AB1P08238 724 aaKnown RBP20.24■□□□□ 0.83
TGFB3-203ENST00000555193 ECE1P42892 770 aa20.24■□□□□ 0.83
TGFB3-203ENST00000555193 TESK2Q96S53 571 aa20.24■□□□□ 0.83
TGFB3-203ENST00000555193 DDX21Q9NR30 783 aaKnown RBP eCLIP20.24■□□□□ 0.83
TGFB3-203ENST00000555193 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
TGFB3-203ENST00000555193 WASHC2AQ641Q2 1341 aa20.23■□□□□ 0.83
TGFB3-203ENST00000555193 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
TGFB3-203ENST00000555193 PDE6BP35913 854 aa20.21■□□□□ 0.83
TGFB3-203ENST00000555193 PNMA8AQ86V59 439 aaPredicted RBP20.21■□□□□ 0.83
TGFB3-203ENST00000555193 SCN11AQ9UI33 1791 aa20.21■□□□□ 0.83
TGFB3-203ENST00000555193 PRPF40BQ6NWY9 871 aaKnown RBP20.2■□□□□ 0.82
TGFB3-203ENST00000555193 ST20-MTHFSA0A0A6YYL1 179 aa20.19■□□□□ 0.82
TGFB3-203ENST00000555193 MTHFSP49914 203 aa20.19■□□□□ 0.82
TGFB3-203ENST00000555193 ZBTB1Q9Y2K1 713 aa20.19■□□□□ 0.82
TGFB3-203ENST00000555193 BRIP1Q9BX63 1249 aa20.18■□□□□ 0.82
TGFB3-203ENST00000555193 CYP19A1P11511 503 aaPredicted RBP20.17■□□□□ 0.82
TGFB3-203ENST00000555193 EIF4A2Q14240 407 aaKnown RBP20.17■□□□□ 0.82
TGFB3-203ENST00000555193 PLEKHO1Q53GL0 409 aaPredicted RBP20.17■□□□□ 0.82
TGFB3-203ENST00000555193 PRR5LQ6MZQ0 368 aa20.17■□□□□ 0.82
TGFB3-203ENST00000555193 TRAF5O00463 557 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms