RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CTR9Q6PD62 1173 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 C6orf229H3BNL8 230 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 DAAM2Q86T65 1068 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 NDC80O14777 642 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 NUTM1Q86Y26 1132 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 LRRC45Q96CN5 670 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 PDZRN3Q9UPQ7 1066 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 SPECC1Q5M775 1068 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 SULT6B1Q6IMI4 303 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 TXNDC2Q86VQ3 553 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 PFDN4Q9NQP4 134 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 A0A087WZG4 1122 aa7.95□□□□□ -1.14
SYNE2-216ENST00000555002 RPUSD2Q8IZ73 545 aaKnown RBP7.95□□□□□ -1.14
SYNE2-216ENST00000555002 CCDC144CPQ8IYA2 1237 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 SRCIN1Q9C0H9 1055 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 MYO1BO43795 1136 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 SFPQP23246 707 aaKnown RBP eCLIP7.94□□□□□ -1.14
SYNE2-216ENST00000555002 CEP112Q8N8E3 955 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 CTCFLQ8NI51 663 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-216ENST00000555002 BBXQ8WY36 941 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-216ENST00000555002 KIF4BQ2VIQ3 1234 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 MRVI1Q9Y6F6 885 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 TTC21AQ8NDW8 1320 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 CRCPO75575 148 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 CCDC63Q8NA47 563 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 HAUS7Q99871 368 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 ARHGAP5Q13017 1502 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 CCDC194A0A1B0GVG4 234 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 GOLGA8BA8MQT2 603 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 SRGAP3O43295 1099 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 ATF7IPQ6VMQ6 1270 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 SIRT1Q96EB6 747 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 NAPBQ9H115 298 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 PHAXQ9H814 394 aaKnown RBP7.94□□□□□ -1.14
SYNE2-216ENST00000555002 EEF2P13639 858 aaKnown RBP7.94□□□□□ -1.14
SYNE2-216ENST00000555002 GUCY1B3Q02153 619 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 MAP3K11Q16584 847 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 FERMT3Q86UX7 667 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 ZNF444Q8N0Y2 327 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-216ENST00000555002 PHACTR2O75167 634 aa7.94□□□□□ -1.14
SYNE2-216ENST00000555002 TOP1P11387 765 aaKnown RBP7.93□□□□□ -1.14
SYNE2-216ENST00000555002 ZNF622Q969S3 477 aaKnown RBP eCLIP7.93□□□□□ -1.14
SYNE2-216ENST00000555002 TBCAO75347 108 aaKnown RBP7.93□□□□□ -1.14
SYNE2-216ENST00000555002 SLC5A1P13866 664 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 NACADO15069 1562 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 TMCO4Q5TGY1 634 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 IQCGQ9H095 443 aaKnown RBP7.93□□□□□ -1.14
SYNE2-216ENST00000555002 EXOSC9Q06265 439 aaKnown RBP7.93□□□□□ -1.14
SYNE2-216ENST00000555002 SSRP1Q08945 709 aaKnown RBP7.93□□□□□ -1.14
SYNE2-216ENST00000555002 FBF1Q8TES7 1133 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 FAM212AQ96EL1 285 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 RAB34Q9BZG1 259 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 WWC3Q9ULE0 1092 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 STARD3NLO95772 234 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 TBC1D5Q92609 795 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 SLC12A7Q9Y666 1083 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 PTCD1O75127 700 aaKnown RBP7.93□□□□□ -1.14
SYNE2-216ENST00000555002 BAG4O95429 457 aaKnown RBP7.93□□□□□ -1.14
SYNE2-216ENST00000555002 U3KPZ7 1027 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-216ENST00000555002 BIRC2Q13490 618 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 MIS18AQ9NYP9 233 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 MICALCLQ6ZW33 695 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 CATIPQ7Z7H3 387 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 RAB11FIP4Q86YS3 637 aa7.93□□□□□ -1.14
SYNE2-216ENST00000555002 YEATS4O95619 227 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 MAP7D1Q3KQU3 841 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 IL1RAPL2Q9NP60 686 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 CCDC117Q8IWD4 279 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-216ENST00000555002 USO1O60763 962 aaKnown RBP7.92□□□□□ -1.14
SYNE2-216ENST00000555002 PKNOX2Q96KN3 472 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 PTPRGP23470 1445 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 PAFAH1B1P43034 410 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 SPECC1LQ69YQ0 1117 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 SYCE3A1L190 88 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 IDEP14735 1019 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 KIF5AQ12840 1032 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 CCDC174Q6PII3 467 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 SLF2Q8IX21 1173 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 TMOD3Q9NYL9 352 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 PPP6R1Q9UPN7 881 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 CFAP65Q6ZU64 1925 aaKnown RBP7.92□□□□□ -1.14
SYNE2-216ENST00000555002 NOL3O60936 208 aaKnown RBP7.92□□□□□ -1.14
SYNE2-216ENST00000555002 SNX16P57768 344 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 PRAM1Q96QH2 718 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 GBP3Q9H0R5 595 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 TRMT1Q9NXH9 659 aaKnown RBP7.92□□□□□ -1.14
SYNE2-216ENST00000555002 BAZ1AQ9NRL2 1556 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-216ENST00000555002 PRPF40BQ6NWY9 871 aaKnown RBP7.92□□□□□ -1.14
SYNE2-216ENST00000555002 CCDC7Q96M83 1385 aa7.92□□□□□ -1.14
SYNE2-216ENST00000555002 CCDC6Q16204 474 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 CALML4Q96GE6 196 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 K7ELQ4 463 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-216ENST00000555002 KRT32Q14532 448 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 AKNAD1Q5T1N1 836 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 SMC1BQ8NDV3 1235 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 BIN1O00499 593 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 IFIT1P09914 478 aaKnown RBP7.91□□□□□ -1.14
SYNE2-216ENST00000555002 MCM3P25205 808 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 ZSCAN31Q96LW9 406 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-216ENST00000555002 ZBTB16Q05516 673 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms