RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	DYRK1B	Q9Y463	629 aa		9.84	□□□□□ -0.83
PSMC6-208	ENST00000554956	RBM19	Q9Y4C8	960 aa	Known RBP	9.84	□□□□□ -0.83
PSMC6-208	ENST00000554956	CDC14C	A4D256	554 aa		9.83	□□□□□ -0.84
PSMC6-208	ENST00000554956	SEC13	P55735	322 aa		9.83	□□□□□ -0.84
PSMC6-208	ENST00000554956	RIPOR1	Q6ZS17	1223 aa		9.83	□□□□□ -0.84
PSMC6-208	ENST00000554956	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	9.83	□□□□□ -0.84
PSMC6-208	ENST00000554956	PARP3	Q9Y6F1	533 aa		9.83	□□□□□ -0.84
PSMC6-208	ENST00000554956	ZDHHC1	Q8WTX9	485 aa		9.82	□□□□□ -0.84
PSMC6-208	ENST00000554956	NIFK	Q9BYG3	293 aa	Known RBP	9.82	□□□□□ -0.84
PSMC6-208	ENST00000554956	CABP1	Q9NZU7	370 aa		9.82	□□□□□ -0.84
PSMC6-208	ENST00000554956		M0R2N6	131 aa		9.81	□□□□□ -0.84
PSMC6-208	ENST00000554956	VWA5B2	Q8N398	1253 aa		9.81	□□□□□ -0.84
PSMC6-208	ENST00000554956	GPR161	Q8N6U8	529 aa	Known RBP	9.81	□□□□□ -0.84
PSMC6-208	ENST00000554956	IRF7	Q92985	503 aa		9.81	□□□□□ -0.84
PSMC6-208	ENST00000554956	ZMIZ1	Q9ULJ6	1067 aa		9.81	□□□□□ -0.84
PSMC6-208	ENST00000554956	NOVA2	Q9UNW9	492 aa	Known RBP	9.81	□□□□□ -0.84
PSMC6-208	ENST00000554956	VSIG8	P0DPA2	414 aa		9.8	□□□□□ -0.84
PSMC6-208	ENST00000554956	MSX1	P28360	303 aa		9.8	□□□□□ -0.84
PSMC6-208	ENST00000554956	GMPR	P36959	345 aa		9.8	□□□□□ -0.84
PSMC6-208	ENST00000554956	SH3PXD2A	Q5TCZ1	1133 aa		9.8	□□□□□ -0.84
PSMC6-208	ENST00000554956	GAS2L2	Q8NHY3	880 aa		9.8	□□□□□ -0.84
PSMC6-208	ENST00000554956	PBXIP1	Q96AQ6	731 aa		9.8	□□□□□ -0.84
PSMC6-208	ENST00000554956		A0A1B0GTH6	734 aa		9.79	□□□□□ -0.84
PSMC6-208	ENST00000554956	F11	P03951	625 aa		9.79	□□□□□ -0.84
PSMC6-208	ENST00000554956	DBN1	Q16643	649 aa		9.79	□□□□□ -0.84
PSMC6-208	ENST00000554956	STK32A	Q8WU08	396 aa		9.79	□□□□□ -0.84
PSMC6-208	ENST00000554956	AIDA	Q96BJ3	306 aa		9.79	□□□□□ -0.84
PSMC6-208	ENST00000554956	ZNF837	Q96EG3	531 aa	Predicted RBP	9.79	□□□□□ -0.84
PSMC6-208	ENST00000554956	ARID3A	Q99856	593 aa		9.79	□□□□□ -0.84
PSMC6-208	ENST00000554956	HINFP	Q9BQA5	517 aa		9.79	□□□□□ -0.84
PSMC6-208	ENST00000554956	RUBCNL	Q9H714	662 aa		9.79	□□□□□ -0.84
PSMC6-208	ENST00000554956	THBS1	P07996	1170 aa		9.78	□□□□□ -0.84
PSMC6-208	ENST00000554956	ATP4A	P20648	1035 aa		9.78	□□□□□ -0.84
PSMC6-208	ENST00000554956	NANOS1	Q8WY41	292 aa	Known RBP	9.78	□□□□□ -0.84
PSMC6-208	ENST00000554956	C21orf2	O43822	256 aa		9.77	□□□□□ -0.85
PSMC6-208	ENST00000554956	TRIM22	Q8IYM9	498 aa		9.77	□□□□□ -0.85
PSMC6-208	ENST00000554956	FAM200A	Q8TCP9	573 aa		9.77	□□□□□ -0.85
PSMC6-208	ENST00000554956	L3MBTL2	Q969R5	705 aa		9.77	□□□□□ -0.85
PSMC6-208	ENST00000554956	ATG7	O95352	703 aa		9.76	□□□□□ -0.85
PSMC6-208	ENST00000554956	TXLNA	P40222	546 aa		9.76	□□□□□ -0.85
PSMC6-208	ENST00000554956	SV2A	Q7L0J3	742 aa		9.76	□□□□□ -0.85
PSMC6-208	ENST00000554956	SCG3	Q8WXD2	468 aa	Known RBP	9.76	□□□□□ -0.85
PSMC6-208	ENST00000554956	ZNF232	Q9UNY5	417 aa		9.76	□□□□□ -0.85
PSMC6-208	ENST00000554956	GPR25	O00155	361 aa		9.75	□□□□□ -0.85
PSMC6-208	ENST00000554956	PPP1R12B	O60237	982 aa	Predicted RBP	9.75	□□□□□ -0.85
PSMC6-208	ENST00000554956	NOS2	P35228	1153 aa		9.75	□□□□□ -0.85
PSMC6-208	ENST00000554956	TEAD4	Q15561	434 aa		9.75	□□□□□ -0.85
PSMC6-208	ENST00000554956	GTPBP3	Q969Y2	492 aa	Known RBP	9.75	□□□□□ -0.85
PSMC6-208	ENST00000554956	NUCKS1	Q9H1E3	243 aa	Known RBP	9.75	□□□□□ -0.85
PSMC6-208	ENST00000554956	EML1	O00423	815 aa		9.74	□□□□□ -0.85
PSMC6-208	ENST00000554956	PSMA6	P60900	246 aa	Known RBP	9.74	□□□□□ -0.85
PSMC6-208	ENST00000554956	KRT76	Q01546	638 aa		9.74	□□□□□ -0.85
PSMC6-208	ENST00000554956	ELOA	Q14241	798 aa	Known RBP	9.74	□□□□□ -0.85
PSMC6-208	ENST00000554956	NBPF1	Q3BBV0	1214 aa		9.74	□□□□□ -0.85
PSMC6-208	ENST00000554956	CHMP7	Q8WUX9	453 aa	Predicted RBP	9.74	□□□□□ -0.85
PSMC6-208	ENST00000554956	ATAD2	Q6PL18	1390 aa		9.74	□□□□□ -0.85
PSMC6-208	ENST00000554956	SERTM1	A2A2V5	107 aa		9.73	□□□□□ -0.85
PSMC6-208	ENST00000554956	RNFT1	Q5M7Z0	435 aa		9.73	□□□□□ -0.85
PSMC6-208	ENST00000554956	TMEM164	Q5U3C3	297 aa		9.73	□□□□□ -0.85
PSMC6-208	ENST00000554956	KLRG1	Q96E93	195 aa		9.73	□□□□□ -0.85
PSMC6-208	ENST00000554956		H7C1W4	665 aa		9.72	□□□□□ -0.85
PSMC6-208	ENST00000554956	CSB-PGBD3	P0DP91	1061 aa		9.72	□□□□□ -0.85
PSMC6-208	ENST00000554956	PGBD3	Q8N328	593 aa		9.72	□□□□□ -0.85
PSMC6-208	ENST00000554956	COL25A1	Q9BXS0	654 aa	Predicted RBP	9.72	□□□□□ -0.85
PSMC6-208	ENST00000554956	ZDHHC3	Q9NYG2	299 aa		9.72	□□□□□ -0.85
PSMC6-208	ENST00000554956	FAM69C	Q0P6D2	419 aa		9.71	□□□□□ -0.86
PSMC6-208	ENST00000554956	ARSJ	Q5FYB0	599 aa	Predicted RBP	9.71	□□□□□ -0.86
PSMC6-208	ENST00000554956	CRISPLD1	Q9H336	500 aa		9.71	□□□□□ -0.86
PSMC6-208	ENST00000554956	HCN4	Q9Y3Q4	1203 aa		9.71	□□□□□ -0.86
PSMC6-208	ENST00000554956	WIPF1	O43516	503 aa		9.7	□□□□□ -0.86
PSMC6-208	ENST00000554956	TAT	P17735	454 aa	Predicted RBP	9.7	□□□□□ -0.86
PSMC6-208	ENST00000554956	UBAP2L	Q14157	1087 aa	Known RBP	9.7	□□□□□ -0.86
PSMC6-208	ENST00000554956	GAS6	Q14393	721 aa		9.7	□□□□□ -0.86
PSMC6-208	ENST00000554956	POTEA	Q6S8J7	498 aa		9.7	□□□□□ -0.86
PSMC6-208	ENST00000554956	C1orf216	Q8TAB5	229 aa		9.7	□□□□□ -0.86
PSMC6-208	ENST00000554956	PRIMPOL	Q96LW4	560 aa		9.7	□□□□□ -0.86
PSMC6-208	ENST00000554956	C2orf49	Q9BVC5	232 aa	Predicted RBP	9.7	□□□□□ -0.86
PSMC6-208	ENST00000554956	ACIN1	Q9UKV3	1341 aa	Known RBP	9.7	□□□□□ -0.86
PSMC6-208	ENST00000554956		A0A1W2PNR3	127 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	PRMT3	O60678	531 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	IGFBP4	P22692	258 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	WEE1	P30291	646 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	BICDL1	Q6ZP65	573 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	GMCL1	Q96IK5	515 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	NGLY1	Q96IV0	654 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	CNTNAP3B	Q96NU0	1288 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	ZIC5	Q96T25	663 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	CNTNAP3	Q9BZ76	1288 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	PHACTR1	Q9C0D0	580 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	CHMP3	Q9Y3E7	222 aa		9.69	□□□□□ -0.86
PSMC6-208	ENST00000554956	HIRA	P54198	1017 aa	Predicted RBP	9.68	□□□□□ -0.86
PSMC6-208	ENST00000554956	EFHC2	Q5JST6	749 aa		9.68	□□□□□ -0.86
PSMC6-208	ENST00000554956	SWI5	Q1ZZU3	235 aa		9.67	□□□□□ -0.86
PSMC6-208	ENST00000554956	RHPN1	Q8TCX5	695 aa		9.67	□□□□□ -0.86
PSMC6-208	ENST00000554956	C7orf43	Q8WVR3	580 aa		9.67	□□□□□ -0.86
PSMC6-208	ENST00000554956	SLAIN2	Q9P270	581 aa		9.67	□□□□□ -0.86
PSMC6-208	ENST00000554956	NCAPD3	P42695	1498 aa		9.66	□□□□□ -0.86
PSMC6-208	ENST00000554956	PPP1R15A	O75807	674 aa	Predicted RBP	9.66	□□□□□ -0.86
PSMC6-208	ENST00000554956	ALDH16A1	Q8IZ83	802 aa		9.66	□□□□□ -0.86
PSMC6-208	ENST00000554956	STAG2	Q8N3U4	1231 aa		9.66	□□□□□ -0.86

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms