RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SLC9A9Q8IVB4 645 aa6.08□□□□□ -1.44
SCFD1-213ENST00000554776 TSEN2Q8NCE0 465 aaKnown RBP6.08□□□□□ -1.44
SCFD1-213ENST00000554776 ZNF837Q96EG3 531 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-213ENST00000554776 TEAD4Q15561 434 aa6.07□□□□□ -1.44
SCFD1-213ENST00000554776 CDCA8Q53HL2 280 aa6.07□□□□□ -1.44
SCFD1-213ENST00000554776 C1orf216Q8TAB5 229 aa6.07□□□□□ -1.44
SCFD1-213ENST00000554776 ZDHHC1Q8WTX9 485 aa6.07□□□□□ -1.44
SCFD1-213ENST00000554776 TSPAN10Q9H1Z9 355 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-213ENST00000554776 CABP1Q9NZU7 370 aa6.07□□□□□ -1.44
SCFD1-213ENST00000554776 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-213ENST00000554776 THBS1P07996 1170 aa6.06□□□□□ -1.44
SCFD1-213ENST00000554776 ATP4AP20648 1035 aa6.06□□□□□ -1.44
SCFD1-213ENST00000554776 ELOAQ14241 798 aaKnown RBP6.06□□□□□ -1.44
SCFD1-213ENST00000554776 LBRQ14739 615 aaKnown RBP6.06□□□□□ -1.44
SCFD1-213ENST00000554776 TBCELQ5QJ74 424 aa6.06□□□□□ -1.44
SCFD1-213ENST00000554776 POTEAQ6S8J7 498 aa6.06□□□□□ -1.44
SCFD1-213ENST00000554776 CRISPLD1Q9H336 500 aa6.06□□□□□ -1.44
SCFD1-213ENST00000554776 GPAMQ9HCL2 828 aa6.06□□□□□ -1.44
SCFD1-213ENST00000554776 ZDHHC3Q9NYG2 299 aa6.06□□□□□ -1.44
SCFD1-213ENST00000554776 NOS2P35228 1153 aa6.05□□□□□ -1.44
SCFD1-213ENST00000554776 PSMA6P60900 246 aaKnown RBP6.05□□□□□ -1.44
SCFD1-213ENST00000554776 KRT76Q01546 638 aa6.05□□□□□ -1.44
SCFD1-213ENST00000554776 NBPF1Q3BBV0 1214 aa6.05□□□□□ -1.44
SCFD1-213ENST00000554776 L3MBTL2Q969R5 705 aa6.05□□□□□ -1.44
SCFD1-213ENST00000554776 PBXIP1Q96AQ6 731 aa6.05□□□□□ -1.44
SCFD1-213ENST00000554776 COL25A1Q9BXS0 654 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-213ENST00000554776 NUCKS1Q9H1E3 243 aaKnown RBP6.05□□□□□ -1.44
SCFD1-213ENST00000554776 NOVA2Q9UNW9 492 aaKnown RBP6.05□□□□□ -1.44
SCFD1-213ENST00000554776 EML1O00423 815 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 C21orf2O43822 256 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 ATG7O95352 703 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 CSB-PGBD3P0DP91 1061 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 HIRAP54198 1017 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-213ENST00000554776 UBAP2LQ14157 1087 aaKnown RBP6.04□□□□□ -1.44
SCFD1-213ENST00000554776 RNFT1Q5M7Z0 435 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 PGBD3Q8N328 593 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 GAS2L2Q8NHY3 880 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 FAM200AQ8TCP9 573 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 GTPBP3Q969Y2 492 aaKnown RBP6.04□□□□□ -1.44
SCFD1-213ENST00000554776 AIDAQ96BJ3 306 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 ARID3AQ99856 593 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 RUBCNLQ9H714 662 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 ZMIZ1Q9ULJ6 1067 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 PARP3Q9Y6F1 533 aa6.04□□□□□ -1.44
SCFD1-213ENST00000554776 SERTM1A2A2V5 107 aa6.03□□□□□ -1.44
SCFD1-213ENST00000554776 TATP17735 454 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-213ENST00000554776 TXLNAP40222 546 aa6.03□□□□□ -1.44
SCFD1-213ENST00000554776 GAS6Q14393 721 aa6.03□□□□□ -1.44
SCFD1-213ENST00000554776 SH3PXD2AQ5TCZ1 1133 aa6.03□□□□□ -1.44
SCFD1-213ENST00000554776 FOXR1Q6PIV2 292 aa6.03□□□□□ -1.44
SCFD1-213ENST00000554776 STAG2Q8N3U4 1231 aa6.03□□□□□ -1.44
SCFD1-213ENST00000554776 HINFPQ9BQA5 517 aa6.03□□□□□ -1.44
SCFD1-213ENST00000554776 ATAD2Q6PL18 1390 aa6.03□□□□□ -1.44
SCFD1-213ENST00000554776 GPR25O00155 361 aa6.02□□□□□ -1.45
SCFD1-213ENST00000554776 PPP1R12BO60237 982 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-213ENST00000554776 IGFBP4P22692 258 aa6.02□□□□□ -1.45
SCFD1-213ENST00000554776 LORP23490 312 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-213ENST00000554776 INSM1Q01101 510 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-213ENST00000554776 EFHC2Q5JST6 749 aa6.02□□□□□ -1.45
SCFD1-213ENST00000554776 NLRP8Q86W28 1048 aa6.02□□□□□ -1.45
SCFD1-213ENST00000554776 SCG3Q8WXD2 468 aaKnown RBP6.02□□□□□ -1.45
SCFD1-213ENST00000554776 ZIC5Q96T25 663 aa6.02□□□□□ -1.45
SCFD1-213ENST00000554776 C2orf49Q9BVC5 232 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-213ENST00000554776 ZNF232Q9UNY5 417 aa6.02□□□□□ -1.45
SCFD1-213ENST00000554776 CHMP3Q9Y3E7 222 aa6.02□□□□□ -1.45
SCFD1-213ENST00000554776 ACIN1Q9UKV3 1341 aaKnown RBP6.01□□□□□ -1.45
SCFD1-213ENST00000554776 A0A1W2PNR3 127 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 PPP1R15AO75807 674 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-213ENST00000554776 WEE1P30291 646 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 FAM69CQ0P6D2 419 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 SWI5Q1ZZU3 235 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 C1orf53Q5VUE5 145 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 STK32AQ8WU08 396 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 C7orf43Q8WVR3 580 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 CNTNAP3BQ96NU0 1288 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 TRERF1Q96PN7 1200 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 CFHR5Q9BXR6 569 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 CNTNAP3Q9BZ76 1288 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 NDFIP2Q9NV92 336 aa6.01□□□□□ -1.45
SCFD1-213ENST00000554776 GPC6Q9Y625 555 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-213ENST00000554776 LGR5O75473 907 aa6□□□□□ -1.45
SCFD1-213ENST00000554776 ARSJQ5FYB0 599 aaPredicted RBP6□□□□□ -1.45
SCFD1-213ENST00000554776 SLURP2P0DP57 97 aa5.99□□□□□ -1.45
SCFD1-213ENST00000554776 TMEM164Q5U3C3 297 aa5.99□□□□□ -1.45
SCFD1-213ENST00000554776 FIGNL1Q6PIW4 674 aa5.99□□□□□ -1.45
SCFD1-213ENST00000554776 BICDL1Q6ZP65 573 aa5.99□□□□□ -1.45
SCFD1-213ENST00000554776 ZCCHC2Q9C0B9 1178 aaKnown RBP5.99□□□□□ -1.45
SCFD1-213ENST00000554776 PHACTR1Q9C0D0 580 aa5.99□□□□□ -1.45
SCFD1-213ENST00000554776 MBIPQ9NS73 344 aa5.99□□□□□ -1.45
SCFD1-213ENST00000554776 ATXN7L1Q9ULK2 861 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-213ENST00000554776 HCN4Q9Y3Q4 1203 aa5.99□□□□□ -1.45
SCFD1-213ENST00000554776 FOXO3O43524 673 aa5.98□□□□□ -1.45
SCFD1-213ENST00000554776 BNIP3LO60238 219 aa5.98□□□□□ -1.45
SCFD1-213ENST00000554776 SRSF11Q05519 484 aaKnown RBP5.98□□□□□ -1.45
SCFD1-213ENST00000554776 SAMD5Q5TGI4 173 aa5.98□□□□□ -1.45
SCFD1-213ENST00000554776 ZSCAN1Q8NBB4 408 aa5.98□□□□□ -1.45
SCFD1-213ENST00000554776 RHPN1Q8TCX5 695 aa5.98□□□□□ -1.45
SCFD1-213ENST00000554776 CHMP7Q8WUX9 453 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-213ENST00000554776 PHF24Q9UPV7 400 aa5.98□□□□□ -1.45
SCFD1-213ENST00000554776 PCDHGC4Q9Y5F7 938 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 214.2 ms