RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 POM121Q96HA1 1249 aa7.88□□□□□ -1.15
ATXN3-228ENST00000554592 AGBL1Q96MI9 1066 aa7.88□□□□□ -1.15
ATXN3-228ENST00000554592 ZNF330Q9Y3S2 320 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-228ENST00000554592 KIF14Q15058 1648 aa7.88□□□□□ -1.15
ATXN3-228ENST00000554592 ARHGAP35Q9NRY4 1499 aa7.87□□□□□ -1.15
ATXN3-228ENST00000554592 VAC14Q08AM6 782 aa7.87□□□□□ -1.15
ATXN3-228ENST00000554592 CCDC125Q86Z20 511 aa7.87□□□□□ -1.15
ATXN3-228ENST00000554592 CFDP1Q9UEE9 299 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-228ENST00000554592 MYO5CQ9NQX4 1742 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 ABCA6Q8N139 1617 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 TERTO14746 1132 aaKnown RBP7.86□□□□□ -1.15
ATXN3-228ENST00000554592 WFS1O76024 890 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 UPP2O95045 317 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 ADH1AP07327 375 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 ERVK-9P63128 1117 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 RNF20Q5VTR2 975 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 ZNF592Q92610 1267 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 DNMT3LQ9UJW3 386 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 SHANK2Q9UPX8 1470 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 KIAA1107Q9UPP5 1409 aa7.86□□□□□ -1.15
ATXN3-228ENST00000554592 CPS1P31327 1500 aa7.85□□□□□ -1.15
ATXN3-228ENST00000554592 ABCC1P33527 1531 aa7.85□□□□□ -1.15
ATXN3-228ENST00000554592 SCTRP47872 440 aa7.85□□□□□ -1.15
ATXN3-228ENST00000554592 CCDC85AQ96PX6 553 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-228ENST00000554592 C1orf115Q9H7X2 142 aa7.85□□□□□ -1.15
ATXN3-228ENST00000554592 CHIC2Q9UKJ5 165 aa7.85□□□□□ -1.15
ATXN3-228ENST00000554592 A2MP01023 1474 aa7.85□□□□□ -1.15
ATXN3-228ENST00000554592 MED1Q15648 1581 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-228ENST00000554592 A2ML1A8K2U0 1454 aa7.84□□□□□ -1.15
ATXN3-228ENST00000554592 TRAK2O60296 914 aa7.84□□□□□ -1.15
ATXN3-228ENST00000554592 PTGIRP43119 386 aa7.84□□□□□ -1.15
ATXN3-228ENST00000554592 EIF4G2P78344 907 aaKnown RBP eCLIP7.84□□□□□ -1.15
ATXN3-228ENST00000554592 RELBQ01201 579 aa7.84□□□□□ -1.15
ATXN3-228ENST00000554592 WASHC4Q2M389 1173 aa7.84□□□□□ -1.15
ATXN3-228ENST00000554592 TSGA10IPQ3SY00 556 aa7.84□□□□□ -1.15
ATXN3-228ENST00000554592 ZNF395Q9H8N7 513 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-228ENST00000554592 NXF1Q9UBU9 619 aaKnown RBP7.84□□□□□ -1.15
ATXN3-228ENST00000554592 TNRQ92752 1358 aa7.84□□□□□ -1.16
ATXN3-228ENST00000554592 TTLL8A6PVC2 850 aa7.83□□□□□ -1.16
ATXN3-228ENST00000554592 CTSOP43234 321 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-228ENST00000554592 CC2D2BQ6DHV5 1058 aa7.83□□□□□ -1.16
ATXN3-228ENST00000554592 FNBP4Q8N3X1 1017 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-228ENST00000554592 CDCA7Q9BWT1 371 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-228ENST00000554592 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-228ENST00000554592 CASKIN1Q8WXD9 1431 aa7.83□□□□□ -1.16
ATXN3-228ENST00000554592 CEP170BQ9Y4F5 1589 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-228ENST00000554592 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
ATXN3-228ENST00000554592 WASHC2CQ9Y4E1 1318 aa7.82□□□□□ -1.16
ATXN3-228ENST00000554592 CCDC18Q5T9S5 1454 aa7.82□□□□□ -1.16
ATXN3-228ENST00000554592 PLEKHH2Q8IVE3 1493 aa7.82□□□□□ -1.16
ATXN3-228ENST00000554592 KIDINS220Q9ULH0 1771 aa7.82□□□□□ -1.16
ATXN3-228ENST00000554592 KIF3BO15066 747 aa7.82□□□□□ -1.16
ATXN3-228ENST00000554592 RAD21O60216 631 aa7.82□□□□□ -1.16
ATXN3-228ENST00000554592 PROSER2Q86WR7 435 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-228ENST00000554592 SAMD9LQ8IVG5 1584 aa7.82□□□□□ -1.16
ATXN3-228ENST00000554592 NPAS3Q8IXF0 933 aa7.82□□□□□ -1.16
ATXN3-228ENST00000554592 INSM2Q96T92 566 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-228ENST00000554592 OSBPL3Q9H4L5 887 aa7.82□□□□□ -1.16
ATXN3-228ENST00000554592 PCDHB11Q9Y5F2 797 aa7.82□□□□□ -1.16
ATXN3-228ENST00000554592 DHX29Q7Z478 1369 aaKnown RBP7.82□□□□□ -1.16
ATXN3-228ENST00000554592 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.82□□□□□ -1.16
ATXN3-228ENST00000554592 H3BM21 787 aa7.81□□□□□ -1.16
ATXN3-228ENST00000554592 MAN1A2O60476 641 aa7.81□□□□□ -1.16
ATXN3-228ENST00000554592 FOXD4L5Q5VV16 416 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-228ENST00000554592 ALG2Q9H553 416 aa7.81□□□□□ -1.16
ATXN3-228ENST00000554592 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
ATXN3-228ENST00000554592 CCNB3Q8WWL7 1395 aa7.81□□□□□ -1.16
ATXN3-228ENST00000554592 NPHP4O75161 1426 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-228ENST00000554592 MIA2Q96PC5 1412 aa7.8□□□□□ -1.16
ATXN3-228ENST00000554592 FIGNL2A6NMB9 653 aa7.8□□□□□ -1.16
ATXN3-228ENST00000554592 RNF217Q8TC41 542 aa7.8□□□□□ -1.16
ATXN3-228ENST00000554592 CDC42BPBQ9Y5S2 1711 aa7.8□□□□□ -1.16
ATXN3-228ENST00000554592 ZNF644Q9H582 1327 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-228ENST00000554592 RTEL1-TNFRSF6BF6WH68 1400 aa7.79□□□□□ -1.16
ATXN3-228ENST00000554592 ATP5J2-PTCD1G3V325 749 aa7.79□□□□□ -1.16
ATXN3-228ENST00000554592 VEGFBP49765 207 aa7.79□□□□□ -1.16
ATXN3-228ENST00000554592 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.16
ATXN3-228ENST00000554592 ARXQ96QS3 562 aa7.79□□□□□ -1.16
ATXN3-228ENST00000554592 ATP7AQ04656 1500 aa7.78□□□□□ -1.16
ATXN3-228ENST00000554592 PREX2Q70Z35 1606 aa7.78□□□□□ -1.16
ATXN3-228ENST00000554592 SOX11P35716 441 aa7.78□□□□□ -1.16
ATXN3-228ENST00000554592 POTEAQ6S8J7 498 aa7.78□□□□□ -1.16
ATXN3-228ENST00000554592 MED14O60244 1454 aa7.78□□□□□ -1.16
ATXN3-228ENST00000554592 ITSN2Q9NZM3 1697 aa7.78□□□□□ -1.16
ATXN3-228ENST00000554592 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
ATXN3-228ENST00000554592 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
ATXN3-228ENST00000554592 SYCP2Q9BX26 1530 aa7.78□□□□□ -1.16
ATXN3-228ENST00000554592 ERBB4Q15303 1308 aa7.78□□□□□ -1.16
ATXN3-228ENST00000554592 PLXNC1O60486 1568 aa7.77□□□□□ -1.17
ATXN3-228ENST00000554592 A0A1W2PRU2 124 aa7.77□□□□□ -1.17
ATXN3-228ENST00000554592 RNF144AP50876 292 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-228ENST00000554592 ADAMTS19Q8TE59 1207 aa7.77□□□□□ -1.17
ATXN3-228ENST00000554592 TRIM52Q96A61 297 aa7.77□□□□□ -1.17
ATXN3-228ENST00000554592 POLMQ9NP87 494 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-228ENST00000554592 FAM135AQ9P2D6 1515 aa7.77□□□□□ -1.17
ATXN3-228ENST00000554592 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-228ENST00000554592 CLTCQ00610 1675 aaKnown RBP7.76□□□□□ -1.17
ATXN3-228ENST00000554592 PZPP20742 1482 aa7.76□□□□□ -1.17
ATXN3-228ENST00000554592 NLRP1Q9C000 1473 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms