RNA–Protein interactions for RNA: ENST00000554573.5

RALGAPA1-208, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-208	ENST00000554573	XPC	Q01831	940 aa	Predicted RBP	4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	RALBP1	Q15311	655 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	C21orf62-AS1	Q17RA5	79 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PI16	Q6UXB8	463 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	C11orf96	Q7Z7L8	435 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	JAML	Q86YT9	394 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	CNPY4	Q8N129	248 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	NME8	Q8N427	588 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	MORC4	Q8TE76	937 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	ZNF516	Q92618	1163 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	TMEM134	Q9H6X4	195 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	MRS2	Q9HD23	443 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	NEUROD4	Q9HD90	331 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	COPRS	Q9NQ92	184 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	TERF2IP	Q9NYB0	399 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	CEP126	Q9P2H0	1117 aa		4.64	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	TREH	O43280	583 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	MZF1	P28698	734 aa	Predicted RBP	4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PPP4C	P60510	307 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	EHHADH	Q08426	723 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	MEI1	Q5TIA1	1274 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PODN	Q7Z5L7	613 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	WDR75	Q8IWA0	830 aa	Known RBP	4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	RPS6KL1	Q9Y6S9	549 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	CCDC189	A1A4V9	331 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573		K7ELQ4	463 aa	Predicted RBP	4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	FKBP4	Q02790	459 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	TKFC	Q3LXA3	575 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	OXLD1	Q5BKU9	147 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PACS2	Q86VP3	889 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	RNF135	Q8IUD6	432 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PLEKHM2	Q8IWE5	1019 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	CCDC85A	Q96PX6	553 aa	Predicted RBP	4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	MTR	Q99707	1265 aa		4.63	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	GCGR	P47871	477 aa		4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	FMR1	Q06787	632 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PKDCC	Q504Y2	493 aa		4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	DALRD3	Q5D0E6	543 aa	Known RBP	4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PHTF2	Q8N3S3	785 aa		4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	RPS6KC1	Q96S38	1066 aa		4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	CFHR5	Q9BXR6	569 aa		4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	SRA1	Q9HD15	236 aa	Known RBP	4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	DNAAF2	Q9NVR5	837 aa	Known RBP	4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	ZBBX	A8MT70	800 aa		4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	S100B	P04271	92 aa	Predicted RBP	4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	SOX11	P35716	441 aa		4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PSMD2	Q13200	908 aa		4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	ODR4	Q5SWX8	454 aa		4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	GML	Q99445	158 aa		4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	DDX41	Q9UJV9	622 aa	Known RBP	4.62	□□□□□ -1.67
RALGAPA1-208	ENST00000554573		A6NHS1	94 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	KIF4A	O95239	1232 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	ETFB	P38117	255 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	CDKN1C	P49918	316 aa	Predicted RBP	4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	ARID5A	Q03989	594 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	NFX1	Q12986	1120 aa	Known RBP	4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	HSP90AB4P	Q58FF6	505 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	TBCEL	Q5QJ74	424 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	CCDC102B	Q68D86	513 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	MPHOSPH6	Q99547	160 aa	Known RBP	4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.61	□□□□□ -1.67	7e-6	■□□□□ 9.4
RALGAPA1-208	ENST00000554573	ZNF408	Q9H9D4	720 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	METTL14	Q9HCE5	456 aa	Known RBP	4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PNMA3	Q9UL41	463 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	APLP1	P51693	650 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	DAB2	P98082	770 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	DSC3	Q14574	896 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	SWI5	Q1ZZU3	235 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	TRIM67	Q6ZTA4	783 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	TMC4	Q7Z404	712 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	USP48	Q86UV5	1035 aa		4.61	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	SH3BP5	O60239	455 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	RNF40	O75150	1001 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	CCDC184	Q52MB2	194 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	ZFYVE27	Q5T4F4	411 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	SYCP2L	Q5T4T6	812 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	SULF1	Q8IWU6	871 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	TATDN2	Q93075	761 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	NIF3L1	Q9GZT8	377 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	FANCL	Q9NW38	375 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	ATP5J2-PTCD1	G3V325	749 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	IBSP	P21815	317 aa	Predicted RBP	4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	GJA5	P36382	358 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	ORC1	Q13415	861 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	TSHZ1	Q6ZSZ6	1077 aa		4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	SRPK1	Q96SB4	655 aa	Known RBP	4.6	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	ESYT3	A0FGR9	886 aa		4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	FZD6	O60353	706 aa		4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PDGFRB	P09619	1106 aa		4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	HCLS1	P14317	486 aa	Predicted RBP	4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	USP5	P45974	858 aa		4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	GTF2I	P78347	998 aa		4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	PAK2	Q13177	524 aa		4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	BIRC2	Q13490	618 aa		4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	RNF19B	Q6ZMZ0	732 aa		4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	LILRB2	Q8N423	598 aa		4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	SLC43A3	Q8NBI5	491 aa		4.59	□□□□□ -1.67
RALGAPA1-208	ENST00000554573	TMX4	Q9H1E5	349 aa	Predicted RBP	4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms