RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 KCPQ6ZWJ8 1503 aa14.83□□□□□ -0.04
ABCD4-221ENST00000554453 POLRMTO00411 1230 aaKnown RBP14.83□□□□□ -0.04
ABCD4-221ENST00000554453 CANXP27824 592 aaKnown RBP14.83□□□□□ -0.04
ABCD4-221ENST00000554453 FMNL2Q96PY5 1086 aa14.83□□□□□ -0.04
ABCD4-221ENST00000554453 HEG1Q9ULI3 1381 aa14.83□□□□□ -0.04
ABCD4-221ENST00000554453 A0A087WZG4 1122 aa14.82□□□□□ -0.04
ABCD4-221ENST00000554453 BTBD11A6QL63 1104 aa14.82□□□□□ -0.04
ABCD4-221ENST00000554453 KCNQ3O43525 872 aa14.82□□□□□ -0.04
ABCD4-221ENST00000554453 RTF1Q92541 710 aaKnown RBP14.82□□□□□ -0.04
ABCD4-221ENST00000554453 BCL2L12Q9HB09 334 aa14.82□□□□□ -0.04
ABCD4-221ENST00000554453 BCS1LQ9Y276 419 aa14.82□□□□□ -0.04
ABCD4-221ENST00000554453 C10orf71Q711Q0 1435 aa14.82□□□□□ -0.04
ABCD4-221ENST00000554453 PXDNLA1KZ92 1463 aa14.82□□□□□ -0.04
ABCD4-221ENST00000554453 C1QTNF8P60827 252 aa14.81□□□□□ -0.04
ABCD4-221ENST00000554453 NFIXQ14938 502 aa14.81□□□□□ -0.04
ABCD4-221ENST00000554453 PIM2Q9P1W9 311 aa14.81□□□□□ -0.04
ABCD4-221ENST00000554453 MCM10Q7L590 875 aa14.8□□□□□ -0.04
ABCD4-221ENST00000554453 COL15A1P39059 1388 aa14.8□□□□□ -0.04
ABCD4-221ENST00000554453 C4AP0C0L4 1744 aa14.8□□□□□ -0.04
ABCD4-221ENST00000554453 A1BGP04217 495 aa14.79□□□□□ -0.04
ABCD4-221ENST00000554453 SERPINB2P05120 415 aa14.79□□□□□ -0.04
ABCD4-221ENST00000554453 IL6STP40189 918 aaPredicted RBP14.79□□□□□ -0.04
ABCD4-221ENST00000554453 TAF7Q15545 349 aaPredicted RBP14.79□□□□□ -0.04
ABCD4-221ENST00000554453 USP16Q9Y5T5 823 aa14.79□□□□□ -0.04
ABCD4-221ENST00000554453 N4BP2Q86UW6 1770 aaPredicted RBP14.78□□□□□ -0.04
ABCD4-221ENST00000554453 UBR2Q8IWV8 1755 aa14.78□□□□□ -0.04
ABCD4-221ENST00000554453 GIGYF1O75420 1035 aaPredicted RBP14.78□□□□□ -0.04
ABCD4-221ENST00000554453 NEFMP07197 916 aa14.78□□□□□ -0.04
ABCD4-221ENST00000554453 DCTN1Q14203 1278 aa14.78□□□□□ -0.04
ABCD4-221ENST00000554453 RALBP1Q15311 655 aa14.78□□□□□ -0.04
ABCD4-221ENST00000554453 ARHGAP27Q6ZUM4 889 aa14.78□□□□□ -0.04
ABCD4-221ENST00000554453 PLEKHF1Q96S99 279 aa14.78□□□□□ -0.04
ABCD4-221ENST00000554453 GOLGB1Q14789 3259 aaKnown RBP14.77□□□□□ -0.04
ABCD4-221ENST00000554453 SNRPA1P09661 255 aaKnown RBP14.77□□□□□ -0.05
ABCD4-221ENST00000554453 DALRD3Q5D0E6 543 aaKnown RBP14.77□□□□□ -0.05
ABCD4-221ENST00000554453 PNNQ9H307 717 aaKnown RBP14.77□□□□□ -0.05
ABCD4-221ENST00000554453 TBC1D2BQ9UPU7 963 aa14.77□□□□□ -0.05
ABCD4-221ENST00000554453 SIPA1L3O60292 1781 aaPredicted RBP14.77□□□□□ -0.05
ABCD4-221ENST00000554453 ATP10DQ9P241 1426 aa14.76□□□□□ -0.05
ABCD4-221ENST00000554453 ADCY9O60503 1353 aa14.76□□□□□ -0.05
ABCD4-221ENST00000554453 KIAA1551Q9HCM1 1747 aa14.76□□□□□ -0.05
ABCD4-221ENST00000554453 CHRNA5P30532 468 aa14.76□□□□□ -0.05
ABCD4-221ENST00000554453 NPM2Q86SE8 214 aaKnown RBP14.76□□□□□ -0.05
ABCD4-221ENST00000554453 GPBP1L1Q9HC44 474 aaPredicted RBP14.76□□□□□ -0.05
ABCD4-221ENST00000554453 DDX10Q13206 875 aaKnown RBP14.75□□□□□ -0.05
ABCD4-221ENST00000554453 TBC1D9BQ66K14 1250 aa14.74□□□□□ -0.05
ABCD4-221ENST00000554453 BICDL1Q6ZP65 573 aa14.74□□□□□ -0.05
ABCD4-221ENST00000554453 PNISRQ8TF01 805 aaKnown RBP14.74□□□□□ -0.05
ABCD4-221ENST00000554453 PRAMEF22A3QJZ6 481 aa14.73□□□□□ -0.05
ABCD4-221ENST00000554453 CAMTA2O94983 1202 aa14.73□□□□□ -0.05
ABCD4-221ENST00000554453 NFE2L2Q16236 605 aa14.73□□□□□ -0.05
ABCD4-221ENST00000554453 MIS18AQ9NYP9 233 aa14.73□□□□□ -0.05
ABCD4-221ENST00000554453 ZNF330Q9Y3S2 320 aaPredicted RBP14.73□□□□□ -0.05
ABCD4-221ENST00000554453 BRCA1P38398 1863 aaKnown RBP14.73□□□□□ -0.05
ABCD4-221ENST00000554453 AFDNP55196 1824 aaKnown RBP14.73□□□□□ -0.05
ABCD4-221ENST00000554453 CLEC4GQ6UXB4 293 aa14.72□□□□□ -0.05
ABCD4-221ENST00000554453 DZIP3Q86Y13 1208 aaKnown RBP14.72□□□□□ -0.05
ABCD4-221ENST00000554453 PDZRN3Q9UPQ7 1066 aa14.72□□□□□ -0.05
ABCD4-221ENST00000554453 NBPF26B4DH59 902 aa14.71□□□□□ -0.05
ABCD4-221ENST00000554453 H0YIN7 160 aa14.71□□□□□ -0.05
ABCD4-221ENST00000554453 NBPF10Q6P3W6 841 aaKnown RBP14.71□□□□□ -0.05
ABCD4-221ENST00000554453 NBPF15Q8N660 670 aa14.71□□□□□ -0.05
ABCD4-221ENST00000554453 TTLL6Q8N841 843 aa14.71□□□□□ -0.05
ABCD4-221ENST00000554453 SETDB2Q96T68 719 aa14.71□□□□□ -0.05
ABCD4-221ENST00000554453 BRIP1Q9BX63 1249 aa14.71□□□□□ -0.05
ABCD4-221ENST00000554453 ARFGEF1Q9Y6D6 1849 aa14.71□□□□□ -0.06
ABCD4-221ENST00000554453 RGL2O15211 777 aa14.7□□□□□ -0.06
ABCD4-221ENST00000554453 PIP4K2AP48426 406 aaPredicted RBP14.7□□□□□ -0.06
ABCD4-221ENST00000554453 C9orf131Q5VYM1 1079 aa14.7□□□□□ -0.06
ABCD4-221ENST00000554453 C2CD5Q86YS7 1000 aa14.7□□□□□ -0.06
ABCD4-221ENST00000554453 ZNF526Q8TF50 670 aaPredicted RBP14.7□□□□□ -0.06
ABCD4-221ENST00000554453 NRXN2Q9P2S2 1712 aa14.69□□□□□ -0.06
ABCD4-221ENST00000554453 SENP3-EIF4A1A0A087X0R7 540 aa14.69□□□□□ -0.06
ABCD4-221ENST00000554453 KIF3CO14782 793 aa14.69□□□□□ -0.06
ABCD4-221ENST00000554453 PDE6BP35913 854 aa14.69□□□□□ -0.06
ABCD4-221ENST00000554453 EIF4A1P60842 406 aaKnown RBP14.69□□□□□ -0.06
ABCD4-221ENST00000554453 PRR5LQ6MZQ0 368 aa14.69□□□□□ -0.06
ABCD4-221ENST00000554453 DLG5Q8TDM6 1919 aa14.68□□□□□ -0.06
ABCD4-221ENST00000554453 THUMPD2Q9BTF0 503 aaKnown RBP14.68□□□□□ -0.06
ABCD4-221ENST00000554453 MAPK8IP3Q9UPT6 1336 aa14.67□□□□□ -0.06
ABCD4-221ENST00000554453 RIPK4P57078 832 aa14.67□□□□□ -0.06
ABCD4-221ENST00000554453 SBF1O95248 1867 aa14.67□□□□□ -0.06
ABCD4-221ENST00000554453 MYBBP1AQ9BQG0 1328 aaKnown RBP14.66□□□□□ -0.06
ABCD4-221ENST00000554453 CARMIL3Q8ND23 1372 aa14.66□□□□□ -0.06
ABCD4-221ENST00000554453 TMPOP42166 694 aaKnown RBP14.66□□□□□ -0.06
ABCD4-221ENST00000554453 ZNF622Q969S3 477 aaKnown RBP eCLIP14.66□□□□□ -0.06
ABCD4-221ENST00000554453 BABAM1Q9NWV8 329 aa14.66□□□□□ -0.06
ABCD4-221ENST00000554453 ZNF652Q9Y2D9 606 aa14.66□□□□□ -0.06
ABCD4-221ENST00000554453 TPTE2Q6XPS3 522 aa14.65□□□□□ -0.06
ABCD4-221ENST00000554453 CCDC24Q8N4L8 307 aa14.65□□□□□ -0.06
ABCD4-221ENST00000554453 CNBD1Q8NA66 436 aa14.65□□□□□ -0.06
ABCD4-221ENST00000554453 RNF181Q9P0P0 153 aa14.65□□□□□ -0.06
ABCD4-221ENST00000554453 ERVV-1B6SEH8 477 aa14.64□□□□□ -0.07
ABCD4-221ENST00000554453 NBPF5PQ86XG9 351 aaPredicted RBP14.64□□□□□ -0.07
ABCD4-221ENST00000554453 CNKSR1Q969H4 720 aa14.64□□□□□ -0.07
ABCD4-221ENST00000554453 KLRG2A4D1S0 409 aaPredicted RBP14.63□□□□□ -0.07
ABCD4-221ENST00000554453 NPHP1O15259 732 aa14.63□□□□□ -0.07
ABCD4-221ENST00000554453 SRGNP10124 158 aa14.63□□□□□ -0.07
ABCD4-221ENST00000554453 LMNB1P20700 586 aa14.63□□□□□ -0.07
ABCD4-221ENST00000554453 ST5P78524 1137 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms