RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 THRAP3Q9Y2W1 955 aaKnown RBP3.69□□□□□ -1.82
PRPF39-206ENST00000554429 NINLQ9Y2I6 1382 aa3.68□□□□□ -1.82
PRPF39-206ENST00000554429 PIK3C2AO00443 1686 aa3.68□□□□□ -1.82
PRPF39-206ENST00000554429 SPATA31A1Q5TZJ5 1347 aa3.68□□□□□ -1.82
PRPF39-206ENST00000554429 PLEKHG3A1L390 1219 aa3.68□□□□□ -1.82
PRPF39-206ENST00000554429 BAG6P46379 1132 aa3.68□□□□□ -1.82
PRPF39-206ENST00000554429 IL27Q8NEV9 243 aa3.68□□□□□ -1.82
PRPF39-206ENST00000554429 CAMKK2Q96RR4 588 aa3.68□□□□□ -1.82
PRPF39-206ENST00000554429 TSR3Q9UJK0 312 aaKnown RBP3.68□□□□□ -1.82
PRPF39-206ENST00000554429 GPRASP1Q5JY77 1395 aa3.68□□□□□ -1.82
PRPF39-206ENST00000554429 CHD4Q14839 1912 aa3.68□□□□□ -1.82
PRPF39-206ENST00000554429 PRR36Q9H6K5 1346 aa3.68□□□□□ -1.82
PRPF39-206ENST00000554429 WASLO00401 505 aaPredicted RBP3.68□□□□□ -1.82
PRPF39-206ENST00000554429 SECISBP2LQ93073 1101 aaKnown RBP3.68□□□□□ -1.82
PRPF39-206ENST00000554429 SF3B2Q13435 895 aaKnown RBP3.67□□□□□ -1.82
PRPF39-206ENST00000554429 CRIPAKQ8N1N5 446 aa3.67□□□□□ -1.82
PRPF39-206ENST00000554429 GPBP1L1Q9HC44 474 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-206ENST00000554429 MAP3K5Q99683 1374 aa3.67□□□□□ -1.82
PRPF39-206ENST00000554429 COL5A2P05997 1499 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-206ENST00000554429 SMARCA5O60264 1052 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-206ENST00000554429 ANAPC15P60006 121 aa3.67□□□□□ -1.82
PRPF39-206ENST00000554429 FAM196AQ6ZSG2 479 aa3.67□□□□□ -1.82
PRPF39-206ENST00000554429 KCNG1Q9UIX4 513 aa3.67□□□□□ -1.82
PRPF39-206ENST00000554429 NFAT5O94916 1531 aa3.67□□□□□ -1.82
PRPF39-206ENST00000554429 NEUROD1Q13562 356 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 PRAM1Q96QH2 718 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 IL21Q9HBE4 155 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 RGPD5Q99666 1765 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 MYOM1P52179 1685 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 KCNMA1Q12791 1236 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 CFAP70Q5T0N1 1121 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 LY75O60449 1722 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 CRB1P82279 1406 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 PTMSP20962 102 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 OS9Q13438 667 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-206ENST00000554429 TMEM132EQ6IEE7 984 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 FAM9BQ8IZU0 186 aa3.66□□□□□ -1.82
PRPF39-206ENST00000554429 PLSCR1O15162 318 aa3.65□□□□□ -1.82
PRPF39-206ENST00000554429 BRD1O95696 1058 aa3.65□□□□□ -1.82
PRPF39-206ENST00000554429 DEFB132Q7Z7B7 95 aa3.65□□□□□ -1.82
PRPF39-206ENST00000554429 OVOS2A0A0G2JMS6 1433 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 OVOS2A0A0J9YW53 1432 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 OVOS2Q6IE36 1432 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 SHANK3Q9BYB0 1731 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 KIAA0232Q92628 1395 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 SBNO2Q9Y2G9 1366 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 POTECB2RU33 542 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 IGHA1P01876 353 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 FBXW7Q969H0 707 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 CDCA7Q9BWT1 371 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-206ENST00000554429 BTG4Q9NY30 223 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 TUBGCP6Q96RT7 1819 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 USP6P35125 1406 aa3.65□□□□□ -1.83
PRPF39-206ENST00000554429 LTN1O94822 1766 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 USP31Q70CQ4 1352 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 RAB3GAP2Q9H2M9 1393 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 XPCQ01831 940 aaPredicted RBP3.64□□□□□ -1.83
PRPF39-206ENST00000554429 CPSF1Q10570 1443 aaKnown RBP3.64□□□□□ -1.83
PRPF39-206ENST00000554429 IRF5Q13568 498 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 PPP1R18Q6NYC8 613 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 ZSCAN1Q8NBB4 408 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 TRAIPQ9BWF2 469 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 CHMP4BQ9H444 224 aaKnown RBP3.64□□□□□ -1.83
PRPF39-206ENST00000554429 WDR70Q9NW82 654 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 BTAF1O14981 1849 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 FOXD4L6Q3SYB3 417 aaPredicted RBP3.64□□□□□ -1.83
PRPF39-206ENST00000554429 FOXD4L3Q6VB84 417 aaPredicted RBP3.64□□□□□ -1.83
PRPF39-206ENST00000554429 GPATCH11Q8N954 259 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 ZC3H15Q8WU90 426 aaKnown RBP3.64□□□□□ -1.83
PRPF39-206ENST00000554429 CLUAP1Q96AJ1 413 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 STK26Q9P289 416 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 TNS2Q63HR2 1409 aa3.64□□□□□ -1.83
PRPF39-206ENST00000554429 LOC102724159A0A0B4J2E5 919 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 ITGAEP38570 1179 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 PWP2Q15269 919 aaKnown RBP3.63□□□□□ -1.83
PRPF39-206ENST00000554429 FAM98CQ17RN3 349 aaKnown RBP3.63□□□□□ -1.83
PRPF39-206ENST00000554429 XP32Q5T750 250 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 TCP11L2Q8N4U5 519 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 NUDT16Q96DE0 195 aaKnown RBP3.63□□□□□ -1.83
PRPF39-206ENST00000554429 ZNF831Q5JPB2 1677 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 NOL8Q76FK4 1167 aaKnown RBP3.63□□□□□ -1.83
PRPF39-206ENST00000554429 RETREG2Q8NC44 543 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 CABLES1Q8TDN4 633 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 POGKQ9P215 609 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 CCDC7Q96M83 1385 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 PPIP5K1Q6PFW1 1433 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 EN1Q05925 392 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-206ENST00000554429 EZH2Q15910 746 aaKnown RBP3.63□□□□□ -1.83
PRPF39-206ENST00000554429 NBPF8Q3BBV2 869 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 GLIPR1L2Q4G1C9 344 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 TJAP1Q5JTD0 557 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 CCER1Q8TC90 406 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-206ENST00000554429 WBP1LQ9NX94 342 aa3.63□□□□□ -1.83
PRPF39-206ENST00000554429 CICQ96RK0 1608 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-206ENST00000554429 ANKRD26Q9UPS8 1709 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 PPP1R3GB7ZBB8 358 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 TERTO14746 1132 aaKnown RBP3.62□□□□□ -1.83
PRPF39-206ENST00000554429 KCNQ2O43526 872 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 BCAMP50895 628 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 SETQ01105 290 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms