RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 HRH3Q9Y5N1 445 aa4.92□□□□□ -1.62
IFT43-208ENST00000554423 A6NJY4 79 aa4.91□□□□□ -1.62
IFT43-208ENST00000554423 LBRQ14739 615 aaKnown RBP4.91□□□□□ -1.62
IFT43-208ENST00000554423 NBPF1Q3BBV0 1214 aa4.91□□□□□ -1.62
IFT43-208ENST00000554423 ZMYM1Q5SVZ6 1142 aa4.91□□□□□ -1.62
IFT43-208ENST00000554423 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
IFT43-208ENST00000554423 DEPDC4Q8N2C3 294 aa4.91□□□□□ -1.62
IFT43-208ENST00000554423 PPP1R12CQ9BZL4 782 aa4.91□□□□□ -1.62
IFT43-208ENST00000554423 SERTAD1Q9UHV2 236 aa4.91□□□□□ -1.62
IFT43-208ENST00000554423 ZNF777Q9ULD5 760 aaPredicted RBP4.91□□□□□ -1.62
IFT43-208ENST00000554423 NSFL1CQ9UNZ2 370 aaKnown RBP4.91□□□□□ -1.62
IFT43-208ENST00000554423 PHF24Q9UPV7 400 aa4.91□□□□□ -1.62
IFT43-208ENST00000554423 CHMP3Q9Y3E7 222 aa4.91□□□□□ -1.62
IFT43-208ENST00000554423 SCO2A0A1W2PP80 73 aa4.9□□□□□ -1.63
IFT43-208ENST00000554423 TATP17735 454 aaPredicted RBP4.9□□□□□ -1.63
IFT43-208ENST00000554423 RASA1P20936 1047 aa4.9□□□□□ -1.63
IFT43-208ENST00000554423 SCNN1DP51172 638 aa4.9□□□□□ -1.63
IFT43-208ENST00000554423 EFHC2Q5JST6 749 aa4.9□□□□□ -1.63
IFT43-208ENST00000554423 CCDC102BQ68D86 513 aa4.9□□□□□ -1.63
IFT43-208ENST00000554423 OGFOD1Q8N543 542 aa4.9□□□□□ -1.63
IFT43-208ENST00000554423 NEDD1Q8NHV4 660 aa4.9□□□□□ -1.63
IFT43-208ENST00000554423 ADAMTS19Q8TE59 1207 aa4.9□□□□□ -1.63
IFT43-208ENST00000554423 FHDC1Q9C0D6 1143 aaPredicted RBP4.9□□□□□ -1.63
IFT43-208ENST00000554423 VRTNQ9H8Y1 702 aa4.9□□□□□ -1.63
IFT43-208ENST00000554423 SENP3-EIF4A1A0A087X0R7 540 aa4.89□□□□□ -1.63
IFT43-208ENST00000554423 M0R2N6 131 aa4.89□□□□□ -1.63
IFT43-208ENST00000554423 LMOD1P29536 600 aaPredicted RBP4.89□□□□□ -1.63
IFT43-208ENST00000554423 PHKA2P46019 1235 aa4.89□□□□□ -1.63
IFT43-208ENST00000554423 SRSF11Q05519 484 aaKnown RBP4.89□□□□□ -1.63
IFT43-208ENST00000554423 C4orf17Q53FE4 359 aa4.89□□□□□ -1.63
IFT43-208ENST00000554423 TPCN2Q8NHX9 752 aa4.89□□□□□ -1.63
IFT43-208ENST00000554423 AIDAQ96BJ3 306 aa4.89□□□□□ -1.63
IFT43-208ENST00000554423 NUCKS1Q9H1E3 243 aaKnown RBP4.89□□□□□ -1.63
IFT43-208ENST00000554423 NEUROD4Q9HD90 331 aa4.89□□□□□ -1.63
IFT43-208ENST00000554423 CABP1Q9NZU7 370 aa4.89□□□□□ -1.63
IFT43-208ENST00000554423 MAFBQ9Y5Q3 323 aaPredicted RBP4.89□□□□□ -1.63
IFT43-208ENST00000554423 TMEM229AB2RXF0 380 aa4.88□□□□□ -1.63
IFT43-208ENST00000554423 MTFR1Q15390 333 aa4.88□□□□□ -1.63
IFT43-208ENST00000554423 FIGNL1Q6PIW4 674 aa4.88□□□□□ -1.63
IFT43-208ENST00000554423 UCN2Q96RP3 112 aa4.88□□□□□ -1.63
IFT43-208ENST00000554423 ZNF358Q9NW07 568 aa4.88□□□□□ -1.63
IFT43-208ENST00000554423 COBLO75128 1261 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 MSX1P28360 303 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 PLA2G4AP47712 749 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 SEC13P55735 322 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 DBN1Q16643 649 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 ARSJQ5FYB0 599 aaPredicted RBP4.87□□□□□ -1.63
IFT43-208ENST00000554423 SIX5Q8N196 739 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.87□□□□□ -1.63
IFT43-208ENST00000554423 GAS2L2Q8NHY3 880 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 CCDC97Q96F63 343 aaPredicted RBP4.87□□□□□ -1.63
IFT43-208ENST00000554423 CFHR5Q9BXR6 569 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 ZDHHC3Q9NYG2 299 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 SCHIP1Q9P0W5 487 aaPredicted RBP4.87□□□□□ -1.63
IFT43-208ENST00000554423 SERPINA10Q9UK55 444 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 GJA3Q9Y6H8 435 aa4.87□□□□□ -1.63
IFT43-208ENST00000554423 ZBTB7BO15156 539 aaPredicted RBP4.86□□□□□ -1.63
IFT43-208ENST00000554423 RFX1P22670 979 aa4.86□□□□□ -1.63
IFT43-208ENST00000554423 TEAD4Q15561 434 aa4.86□□□□□ -1.63
IFT43-208ENST00000554423 C14orf37Q86TY3 774 aa4.86□□□□□ -1.63
IFT43-208ENST00000554423 NLRP8Q86W28 1048 aa4.86□□□□□ -1.63
IFT43-208ENST00000554423 GTPBP3Q969Y2 492 aaKnown RBP4.86□□□□□ -1.63
IFT43-208ENST00000554423 ZNF837Q96EG3 531 aaPredicted RBP4.86□□□□□ -1.63
IFT43-208ENST00000554423 GPAMQ9HCL2 828 aa4.86□□□□□ -1.63
IFT43-208ENST00000554423 ZNF232Q9UNY5 417 aa4.86□□□□□ -1.63
IFT43-208ENST00000554423 SERTM1A2A2V5 107 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 KRBA1A5PL33 1030 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 FAM196BA6NMK8 535 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 STAU1O95793 577 aaKnown RBP4.85□□□□□ -1.63
IFT43-208ENST00000554423 PSMA6P60900 246 aaKnown RBP4.85□□□□□ -1.63
IFT43-208ENST00000554423 CLDN10P78369 228 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 BICDL1Q6ZP65 573 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 SLC9A9Q8IVB4 645 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 TNS4Q8IZW8 715 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 ZNF594Q96JF6 807 aaPredicted RBP4.85□□□□□ -1.63
IFT43-208ENST00000554423 HINFPQ9BQA5 517 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 CRISPLD1Q9H336 500 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 SEMA6BQ9H3T3 888 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.85□□□□□ -1.63
IFT43-208ENST00000554423 MBIPQ9NS73 344 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 ANKIB1Q9P2G1 1089 aa4.85□□□□□ -1.63
IFT43-208ENST00000554423 GPC6Q9Y625 555 aaPredicted RBP4.85□□□□□ -1.63
IFT43-208ENST00000554423 MX2P20592 715 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 NOS2P35228 1153 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 MAP2K3P46734 347 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 HIF1AQ16665 826 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 KANK4Q5T7N3 995 aaPredicted RBP4.84□□□□□ -1.63
IFT43-208ENST00000554423 C1orf53Q5VUE5 145 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 NBPF11Q86T75 865 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 ANKMY2Q8IV38 441 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 FAM200AQ8TCP9 573 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 L3MBTL2Q969R5 705 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 RUBCNLQ9H714 662 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 CUEDC1Q9NWM3 386 aaPredicted RBP4.84□□□□□ -1.63
IFT43-208ENST00000554423 IQSEC3Q9UPP2 1182 aaPredicted RBP4.84□□□□□ -1.63
IFT43-208ENST00000554423 PCDHGC4Q9Y5F7 938 aa4.84□□□□□ -1.63
IFT43-208ENST00000554423 PPP1R12BO60237 982 aaPredicted RBP4.83□□□□□ -1.64
IFT43-208ENST00000554423 STAG2Q8N3U4 1231 aa4.83□□□□□ -1.64
IFT43-208ENST00000554423 ATXN7L1Q9ULK2 861 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms