RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 MYBBP1AQ9BQG0 1328 aaKnown RBP10.04□□□□□ -0.8
LINC00640-201ENST00000554409 RPS6KA4O75676 772 aa10.03□□□□□ -0.8
LINC00640-201ENST00000554409 PHF14O94880 888 aa10.03□□□□□ -0.8
LINC00640-201ENST00000554409 VSIG10Q8N0Z9 540 aa10.03□□□□□ -0.8
LINC00640-201ENST00000554409 RTCBQ9Y3I0 505 aaKnown RBP10.03□□□□□ -0.8
LINC00640-201ENST00000554409 HTATSF1O43719 755 aaKnown RBP10.02□□□□□ -0.81
LINC00640-201ENST00000554409 TEFQ10587 303 aa10.02□□□□□ -0.81
LINC00640-201ENST00000554409 KIF13BQ9NQT8 1826 aa10.02□□□□□ -0.81
LINC00640-201ENST00000554409 CRKLP46109 303 aaKnown RBP10.01□□□□□ -0.81
LINC00640-201ENST00000554409 SLC39A6Q13433 755 aa10.01□□□□□ -0.81
LINC00640-201ENST00000554409 TRAPPC3LQ5T215 181 aa10.01□□□□□ -0.81
LINC00640-201ENST00000554409 MSL1Q68DK7 614 aa10.01□□□□□ -0.81
LINC00640-201ENST00000554409 SMIM5Q71RC9 77 aa10.01□□□□□ -0.81
LINC00640-201ENST00000554409 MIER1Q8N108 512 aa10.01□□□□□ -0.81
LINC00640-201ENST00000554409 PLEKHF1Q96S99 279 aa10.01□□□□□ -0.81
LINC00640-201ENST00000554409 PNNQ9H307 717 aaKnown RBP10.01□□□□□ -0.81
LINC00640-201ENST00000554409 KDM3BQ7LBC6 1761 aa10.01□□□□□ -0.81
LINC00640-201ENST00000554409 NEFMP07197 916 aa10□□□□□ -0.81
LINC00640-201ENST00000554409 CYP19A1P11511 503 aaPredicted RBP10□□□□□ -0.81
LINC00640-201ENST00000554409 INTS5Q6P9B9 1019 aaKnown RBP10□□□□□ -0.81
LINC00640-201ENST00000554409 ZNF790Q6PG37 636 aa10□□□□□ -0.81
LINC00640-201ENST00000554409 DNAJC10Q8IXB1 793 aa10□□□□□ -0.81
LINC00640-201ENST00000554409 TTC5Q8N0Z6 440 aa10□□□□□ -0.81
LINC00640-201ENST00000554409 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
LINC00640-201ENST00000554409 RTF1Q92541 710 aaKnown RBP10□□□□□ -0.81
LINC00640-201ENST00000554409 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
LINC00640-201ENST00000554409 CREBZFQ9NS37 354 aa10□□□□□ -0.81
LINC00640-201ENST00000554409 CCDC87Q9NVE4 849 aa10□□□□□ -0.81
LINC00640-201ENST00000554409 HEG1Q9ULI3 1381 aa10□□□□□ -0.81
LINC00640-201ENST00000554409 PRKRIP1Q9H875 184 aaPredicted RBP9.99□□□□□ -0.81
LINC00640-201ENST00000554409 CD2APQ9Y5K6 639 aa9.99□□□□□ -0.81
LINC00640-201ENST00000554409 SOS1Q07889 1333 aaPredicted RBP9.99□□□□□ -0.81
LINC00640-201ENST00000554409 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
LINC00640-201ENST00000554409 LAMB4A4D0S4 1761 aa9.98□□□□□ -0.81
LINC00640-201ENST00000554409 CHD4Q14839 1912 aa9.98□□□□□ -0.81
LINC00640-201ENST00000554409 BTBD11A6QL63 1104 aa9.98□□□□□ -0.81
LINC00640-201ENST00000554409 RFC4P35249 363 aa9.98□□□□□ -0.81
LINC00640-201ENST00000554409 NFE2L2Q16236 605 aa9.98□□□□□ -0.81
LINC00640-201ENST00000554409 MCM10Q7L590 875 aa9.98□□□□□ -0.81
LINC00640-201ENST00000554409 NLGN1Q8N2Q7 840 aa9.98□□□□□ -0.81
LINC00640-201ENST00000554409 ZNF496Q96IT1 587 aaPredicted RBP9.98□□□□□ -0.81
LINC00640-201ENST00000554409 FMNL2Q96PY5 1086 aa9.98□□□□□ -0.81
LINC00640-201ENST00000554409 SCN7AQ01118 1682 aa9.98□□□□□ -0.81
LINC00640-201ENST00000554409 USP42Q9H9J4 1324 aaKnown RBP9.98□□□□□ -0.81
LINC00640-201ENST00000554409 HAX1O00165 279 aa9.97□□□□□ -0.81
LINC00640-201ENST00000554409 GYS1P13807 737 aa9.97□□□□□ -0.81
LINC00640-201ENST00000554409 TEX13AQ9BXU3 409 aaPredicted RBP9.97□□□□□ -0.81
LINC00640-201ENST00000554409 FARP1Q9Y4F1 1045 aaPredicted RBP9.97□□□□□ -0.81
LINC00640-201ENST00000554409 MAPK8IP3Q9UPT6 1336 aa9.97□□□□□ -0.81
LINC00640-201ENST00000554409 COL15A1P39059 1388 aa9.97□□□□□ -0.81
LINC00640-201ENST00000554409 NRXN2Q9P2S2 1712 aa9.96□□□□□ -0.81
LINC00640-201ENST00000554409 BCORQ6W2J9 1755 aa9.96□□□□□ -0.81
LINC00640-201ENST00000554409 STARD3NLO95772 234 aa9.96□□□□□ -0.82
LINC00640-201ENST00000554409 DCTN1Q14203 1278 aa9.96□□□□□ -0.82
LINC00640-201ENST00000554409 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
LINC00640-201ENST00000554409 NLGN2Q8NFZ4 835 aa9.96□□□□□ -0.82
LINC00640-201ENST00000554409 ZBTB1Q9Y2K1 713 aa9.96□□□□□ -0.82
LINC00640-201ENST00000554409 C10orf71Q711Q0 1435 aa9.96□□□□□ -0.82
LINC00640-201ENST00000554409 KCNQ3O43525 872 aa9.95□□□□□ -0.82
LINC00640-201ENST00000554409 MMP10P09238 476 aa9.95□□□□□ -0.82
LINC00640-201ENST00000554409 TAF7Q15545 349 aaPredicted RBP9.95□□□□□ -0.82
LINC00640-201ENST00000554409 BRCA1P38398 1863 aaKnown RBP9.94□□□□□ -0.82
LINC00640-201ENST00000554409 AFDNP55196 1824 aaKnown RBP9.94□□□□□ -0.82
LINC00640-201ENST00000554409 ZNF316A6NFI3 1004 aaPredicted RBP9.94□□□□□ -0.82
LINC00640-201ENST00000554409 EIF5P55010 431 aaKnown RBP9.94□□□□□ -0.82
LINC00640-201ENST00000554409 PNISRQ8TF01 805 aaKnown RBP9.94□□□□□ -0.82
LINC00640-201ENST00000554409 SRP68Q9UHB9 627 aaKnown RBP9.94□□□□□ -0.82
LINC00640-201ENST00000554409 NARFQ9UHQ1 456 aa9.94□□□□□ -0.82
LINC00640-201ENST00000554409 N4BP2Q86UW6 1770 aaPredicted RBP9.93□□□□□ -0.82
LINC00640-201ENST00000554409 A0A087WZG4 1122 aa9.93□□□□□ -0.82
LINC00640-201ENST00000554409 ZPR1O75312 459 aa9.93□□□□□ -0.82
LINC00640-201ENST00000554409 SNRPA1P09661 255 aaKnown RBP9.93□□□□□ -0.82
LINC00640-201ENST00000554409 IL6STP40189 918 aaPredicted RBP9.93□□□□□ -0.82
LINC00640-201ENST00000554409 WDR43Q15061 677 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00640-201ENST00000554409 ZBTB47Q9UFB7 747 aaPredicted RBP9.93□□□□□ -0.82
LINC00640-201ENST00000554409 PARP3Q9Y6F1 533 aa9.93□□□□□ -0.82
LINC00640-201ENST00000554409 PXDNLA1KZ92 1463 aa9.92□□□□□ -0.82
LINC00640-201ENST00000554409 CANXP27824 592 aaKnown RBP9.92□□□□□ -0.82
LINC00640-201ENST00000554409 TM4SF1P30408 202 aa9.92□□□□□ -0.82
LINC00640-201ENST00000554409 TMPOP42166 694 aaKnown RBP9.92□□□□□ -0.82
LINC00640-201ENST00000554409 LMOD3Q0VAK6 560 aa9.92□□□□□ -0.82
LINC00640-201ENST00000554409 GPR162Q16538 588 aa9.92□□□□□ -0.82
LINC00640-201ENST00000554409 USPL1Q5W0Q7 1092 aa9.92□□□□□ -0.82
LINC00640-201ENST00000554409 RUNDC1Q96C34 613 aa9.92□□□□□ -0.82
LINC00640-201ENST00000554409 BCL2L12Q9HB09 334 aa9.92□□□□□ -0.82
LINC00640-201ENST00000554409 USP16Q9Y5T5 823 aa9.92□□□□□ -0.82
LINC00640-201ENST00000554409 DLEC1Q9Y238 1755 aa9.91□□□□□ -0.82
LINC00640-201ENST00000554409 POLRMTO00411 1230 aaKnown RBP9.91□□□□□ -0.82
LINC00640-201ENST00000554409 YBX3P16989 372 aaKnown RBP eCLIP9.91□□□□□ -0.82
LINC00640-201ENST00000554409 YY1P25490 414 aa9.91□□□□□ -0.82
LINC00640-201ENST00000554409 RIPK4P57078 832 aa9.91□□□□□ -0.82
LINC00640-201ENST00000554409 TGFB2P61812 414 aa9.91□□□□□ -0.82
LINC00640-201ENST00000554409 DDR1Q08345 913 aa9.91□□□□□ -0.82
LINC00640-201ENST00000554409 BABAM1Q9NWV8 329 aa9.91□□□□□ -0.82
LINC00640-201ENST00000554409 ADAMTS8Q9UP79 889 aa9.91□□□□□ -0.82
LINC00640-201ENST00000554409 ARFGEF1Q9Y6D6 1849 aa9.91□□□□□ -0.82
LINC00640-201ENST00000554409 PRAMEF22A3QJZ6 481 aa9.9□□□□□ -0.82
LINC00640-201ENST00000554409 GRIN3BO60391 1043 aa9.9□□□□□ -0.82
LINC00640-201ENST00000554409 A1BGP04217 495 aa9.9□□□□□ -0.82
LINC00640-201ENST00000554409 EIF4A1P60842 406 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms