RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 FAM196BA6NMK8 535 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L15C9J2P7 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L10C9JJH3 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L13C9JLJ4 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L12C9JPN9 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L11C9JVI0 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L21D6R901 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L18D6R9N7 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L22D6RA61 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L17D6RBQ6 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L19D6RCP7 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L20D6RJB6 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 NOS2P35228 1153 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 USP17L24Q0WX57 530 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 TEAD4Q15561 434 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 ZSCAN1Q8NBB4 408 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 C1orf216Q8TAB5 229 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 TRERF1Q96PN7 1200 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 HINFPQ9BQA5 517 aa9.63□□□□□ -0.87
ATXN3-225ENST00000554214 THBS1P07996 1170 aa9.62□□□□□ -0.87
ATXN3-225ENST00000554214 NBPF1Q3BBV0 1214 aa9.62□□□□□ -0.87
ATXN3-225ENST00000554214 ARSJQ5FYB0 599 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-225ENST00000554214 EFHC2Q5JST6 749 aa9.62□□□□□ -0.87
ATXN3-225ENST00000554214 ZDHHC1Q8WTX9 485 aa9.62□□□□□ -0.87
ATXN3-225ENST00000554214 CCDC97Q96F63 343 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-225ENST00000554214 TSPAN10Q9H1Z9 355 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-225ENST00000554214 SERPINA10Q9UK55 444 aa9.62□□□□□ -0.87
ATXN3-225ENST00000554214 ZNF232Q9UNY5 417 aa9.62□□□□□ -0.87
ATXN3-225ENST00000554214 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-225ENST00000554214 SERTM1A2A2V5 107 aa9.6□□□□□ -0.87
ATXN3-225ENST00000554214 TATP17735 454 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-225ENST00000554214 ATP4AP20648 1035 aa9.6□□□□□ -0.87
ATXN3-225ENST00000554214 GAS6Q14393 721 aa9.6□□□□□ -0.87
ATXN3-225ENST00000554214 LBRQ14739 615 aaKnown RBP9.6□□□□□ -0.87
ATXN3-225ENST00000554214 CRISPLD1Q9H336 500 aa9.6□□□□□ -0.87
ATXN3-225ENST00000554214 ZDHHC3Q9NYG2 299 aa9.6□□□□□ -0.87
ATXN3-225ENST00000554214 A0A1W2PNR3 127 aa9.59□□□□□ -0.87
ATXN3-225ENST00000554214 LGR5O75473 907 aa9.59□□□□□ -0.87
ATXN3-225ENST00000554214 TXLNAP40222 546 aa9.59□□□□□ -0.87
ATXN3-225ENST00000554214 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
ATXN3-225ENST00000554214 CFHR5Q9BXR6 569 aa9.59□□□□□ -0.87
ATXN3-225ENST00000554214 ATAD2Q6PL18 1390 aa9.59□□□□□ -0.87
ATXN3-225ENST00000554214 PPP1R12BO60237 982 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-225ENST00000554214 PSMA6P60900 246 aaKnown RBP9.58□□□□□ -0.88
ATXN3-225ENST00000554214 UBAP2LQ14157 1087 aaKnown RBP9.58□□□□□ -0.88
ATXN3-225ENST00000554214 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
ATXN3-225ENST00000554214 SCG3Q8WXD2 468 aaKnown RBP9.58□□□□□ -0.88
ATXN3-225ENST00000554214 ARXQ96QS3 562 aa9.58□□□□□ -0.88
ATXN3-225ENST00000554214 ZIC5Q96T25 663 aa9.58□□□□□ -0.88
ATXN3-225ENST00000554214 CHMP3Q9Y3E7 222 aa9.58□□□□□ -0.88
ATXN3-225ENST00000554214 HCN4Q9Y3Q4 1203 aa9.58□□□□□ -0.88
ATXN3-225ENST00000554214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-225ENST00000554214 C21orf2O43822 256 aa9.57□□□□□ -0.88
ATXN3-225ENST00000554214 SRPK2P78362 688 aaKnown RBP9.57□□□□□ -0.88
ATXN3-225ENST00000554214 SH3PXD2AQ5TCZ1 1133 aa9.57□□□□□ -0.88
ATXN3-225ENST00000554214 NLRP8Q86W28 1048 aa9.57□□□□□ -0.88
ATXN3-225ENST00000554214 ZCCHC2Q9C0B9 1178 aaKnown RBP9.57□□□□□ -0.88
ATXN3-225ENST00000554214 STK17AQ9UEE5 414 aa9.57□□□□□ -0.88
ATXN3-225ENST00000554214 PHF24Q9UPV7 400 aa9.57□□□□□ -0.88
ATXN3-225ENST00000554214 EML1O00423 815 aa9.56□□□□□ -0.88
ATXN3-225ENST00000554214 SRSF11Q05519 484 aaKnown RBP9.56□□□□□ -0.88
ATXN3-225ENST00000554214 GAS2L2Q8NHY3 880 aa9.56□□□□□ -0.88
ATXN3-225ENST00000554214 CHMP7Q8WUX9 453 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-225ENST00000554214 MBIPQ9NS73 344 aa9.56□□□□□ -0.88
ATXN3-225ENST00000554214 NOVA2Q9UNW9 492 aaKnown RBP9.56□□□□□ -0.88
ATXN3-225ENST00000554214 GJA3Q9Y6H8 435 aa9.56□□□□□ -0.88
ATXN3-225ENST00000554214 ADAMTS2O95450 1211 aa9.55□□□□□ -0.88
ATXN3-225ENST00000554214 SLURP2P0DP57 97 aa9.55□□□□□ -0.88
ATXN3-225ENST00000554214 MX2P20592 715 aa9.55□□□□□ -0.88
ATXN3-225ENST00000554214 FIGNL1Q6PIW4 674 aa9.55□□□□□ -0.88
ATXN3-225ENST00000554214 NEUROD4Q9HD90 331 aa9.55□□□□□ -0.88
ATXN3-225ENST00000554214 PCDHGC4Q9Y5F7 938 aa9.55□□□□□ -0.88
ATXN3-225ENST00000554214 FAM181BA6NEQ2 426 aa9.54□□□□□ -0.88
ATXN3-225ENST00000554214 BNIP3LO60238 219 aa9.54□□□□□ -0.88
ATXN3-225ENST00000554214 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
ATXN3-225ENST00000554214 C7orf43Q8WVR3 580 aa9.54□□□□□ -0.88
ATXN3-225ENST00000554214 IGF1RP08069 1367 aa9.53□□□□□ -0.88
ATXN3-225ENST00000554214 ATXN7O15265 892 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-225ENST00000554214 C1orf53Q5VUE5 145 aa9.53□□□□□ -0.88
ATXN3-225ENST00000554214 STAG2Q8N3U4 1231 aa9.53□□□□□ -0.88
ATXN3-225ENST00000554214 CCDC82Q8N4S0 544 aa9.53□□□□□ -0.88
ATXN3-225ENST00000554214 WHAMMQ8TF30 809 aa9.53□□□□□ -0.88
ATXN3-225ENST00000554214 ABHD17AQ96GS6 310 aa9.53□□□□□ -0.88
ATXN3-225ENST00000554214 C2orf49Q9BVC5 232 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-225ENST00000554214 C1orf115Q9H7X2 142 aa9.53□□□□□ -0.88
ATXN3-225ENST00000554214 NSFL1CQ9UNZ2 370 aaKnown RBP9.53□□□□□ -0.88
ATXN3-225ENST00000554214 POTEAQ6S8J7 498 aa9.52□□□□□ -0.89
ATXN3-225ENST00000554214 PHACTR1Q9C0D0 580 aa9.52□□□□□ -0.89
ATXN3-225ENST00000554214 NDFIP2Q9NV92 336 aa9.52□□□□□ -0.89
ATXN3-225ENST00000554214 ATXN7L1Q9ULK2 861 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-225ENST00000554214 ATG7O95352 703 aa9.51□□□□□ -0.89
ATXN3-225ENST00000554214 HIRAP54198 1017 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-225ENST00000554214 ELOAQ14241 798 aaKnown RBP9.51□□□□□ -0.89
ATXN3-225ENST00000554214 LRRC69Q6ZNQ3 347 aa9.51□□□□□ -0.89
ATXN3-225ENST00000554214 PBXIP1Q96AQ6 731 aa9.51□□□□□ -0.89
ATXN3-225ENST00000554214 FGFR3P22607 806 aa9.5□□□□□ -0.89
ATXN3-225ENST00000554214 IGFBP4P22692 258 aa9.5□□□□□ -0.89
ATXN3-225ENST00000554214 CTBSQ01459 385 aa9.5□□□□□ -0.89
ATXN3-225ENST00000554214 ZNF385CQ66K41 422 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms