RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 NRXN2Q9P2S2 1712 aa13.44□□□□□ -0.26
PTPN21-204ENST00000554178 PLEKHG2Q9H7P9 1386 aa13.44□□□□□ -0.26
PTPN21-204ENST00000554178 CNTNAP4Q9C0A0 1308 aa13.43□□□□□ -0.26
PTPN21-204ENST00000554178 SLC24A1O60721 1099 aa13.43□□□□□ -0.26
PTPN21-204ENST00000554178 PTCD1O75127 700 aaKnown RBP13.43□□□□□ -0.26
PTPN21-204ENST00000554178 TGFB2P61812 414 aa13.43□□□□□ -0.26
PTPN21-204ENST00000554178 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
PTPN21-204ENST00000554178 ZNF530Q6P9A1 599 aaPredicted RBP13.43□□□□□ -0.26
PTPN21-204ENST00000554178 DICER1Q9UPY3 1922 aaKnown RBP13.43□□□□□ -0.26
PTPN21-204ENST00000554178 CHRNA5P30532 468 aa13.42□□□□□ -0.26
PTPN21-204ENST00000554178 DDR1Q08345 913 aa13.42□□□□□ -0.26
PTPN21-204ENST00000554178 AEBP1Q8IUX7 1158 aa13.42□□□□□ -0.26
PTPN21-204ENST00000554178 C16orf71Q8IYS4 520 aaPredicted RBP13.42□□□□□ -0.26
PTPN21-204ENST00000554178 NLGN1Q8N2Q7 840 aa13.42□□□□□ -0.26
PTPN21-204ENST00000554178 DNAJC5GQ8N7S2 189 aa13.42□□□□□ -0.26
PTPN21-204ENST00000554178 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTPN21-204ENST00000554178 RNF181Q9P0P0 153 aa13.42□□□□□ -0.26
PTPN21-204ENST00000554178 UBR2Q8IWV8 1755 aa13.42□□□□□ -0.26
PTPN21-204ENST00000554178 RASSF7Q02833 373 aa13.41□□□□□ -0.26
PTPN21-204ENST00000554178 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
PTPN21-204ENST00000554178 RPS6KA4O75676 772 aa13.4□□□□□ -0.26
PTPN21-204ENST00000554178 KCNA3P22001 575 aa13.4□□□□□ -0.26
PTPN21-204ENST00000554178 CRKLP46109 303 aaKnown RBP13.4□□□□□ -0.26
PTPN21-204ENST00000554178 CABP4P57796 275 aa13.4□□□□□ -0.26
PTPN21-204ENST00000554178 FKBP8Q14318 412 aa13.4□□□□□ -0.26
PTPN21-204ENST00000554178 PCNTO95613 3336 aa13.4□□□□□ -0.26
PTPN21-204ENST00000554178 USP42Q9H9J4 1324 aaKnown RBP13.39□□□□□ -0.27
PTPN21-204ENST00000554178 COL13A1Q5TAT6 717 aaPredicted RBP13.39□□□□□ -0.27
PTPN21-204ENST00000554178 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
PTPN21-204ENST00000554178 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
PTPN21-204ENST00000554178 DALRD3Q5D0E6 543 aaKnown RBP13.38□□□□□ -0.27
PTPN21-204ENST00000554178 RBM46Q8TBY0 533 aaKnown RBP13.38□□□□□ -0.27
PTPN21-204ENST00000554178 RRAGCQ9HB90 399 aa13.38□□□□□ -0.27
PTPN21-204ENST00000554178 PIM2Q9P1W9 311 aa13.38□□□□□ -0.27
PTPN21-204ENST00000554178 FER1L6Q2WGJ9 1857 aa13.38□□□□□ -0.27
PTPN21-204ENST00000554178 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
PTPN21-204ENST00000554178 KLRG1Q96E93 195 aa13.37□□□□□ -0.27
PTPN21-204ENST00000554178 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
PTPN21-204ENST00000554178 KDM2BQ8NHM5 1336 aa13.37□□□□□ -0.27
PTPN21-204ENST00000554178 MRC1P22897 1456 aa13.36□□□□□ -0.27
PTPN21-204ENST00000554178 CARMIL3Q8ND23 1372 aa13.36□□□□□ -0.27
PTPN21-204ENST00000554178 SIPA1L3O60292 1781 aaPredicted RBP13.36□□□□□ -0.27
PTPN21-204ENST00000554178 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
PTPN21-204ENST00000554178 HSP90AB1P08238 724 aaKnown RBP13.36□□□□□ -0.27
PTPN21-204ENST00000554178 MTHFSP49914 203 aa13.36□□□□□ -0.27
PTPN21-204ENST00000554178 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
PTPN21-204ENST00000554178 C1orf141Q5JVX7 400 aa13.36□□□□□ -0.27
PTPN21-204ENST00000554178 BCORQ6W2J9 1755 aa13.35□□□□□ -0.27
PTPN21-204ENST00000554178 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
PTPN21-204ENST00000554178 USPL1Q5W0Q7 1092 aa13.35□□□□□ -0.27
PTPN21-204ENST00000554178 NFATC2IPQ8NCF5 419 aa13.35□□□□□ -0.27
PTPN21-204ENST00000554178 DNAJC10Q8IXB1 793 aa13.34□□□□□ -0.27
PTPN21-204ENST00000554178 COL15A1P39059 1388 aa13.33□□□□□ -0.27
PTPN21-204ENST00000554178 PRELPP51888 382 aa13.33□□□□□ -0.28
PTPN21-204ENST00000554178 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
PTPN21-204ENST00000554178 INTS5Q6P9B9 1019 aaKnown RBP13.33□□□□□ -0.28
PTPN21-204ENST00000554178 SLX4Q8IY92 1834 aa13.33□□□□□ -0.28
PTPN21-204ENST00000554178 FSTL1Q12841 308 aa13.32□□□□□ -0.28
PTPN21-204ENST00000554178 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
PTPN21-204ENST00000554178 TNS4Q8IZW8 715 aa13.32□□□□□ -0.28
PTPN21-204ENST00000554178 CREBZFQ9NS37 354 aa13.32□□□□□ -0.28
PTPN21-204ENST00000554178 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
PTPN21-204ENST00000554178 GABBR2O75899 941 aa13.31□□□□□ -0.28
PTPN21-204ENST00000554178 AMOTQ4VCS5 1084 aa13.31□□□□□ -0.28
PTPN21-204ENST00000554178 JMYQ8N9B5 988 aa13.31□□□□□ -0.28
PTPN21-204ENST00000554178 ZBTB1Q9Y2K1 713 aa13.31□□□□□ -0.28
PTPN21-204ENST00000554178 ZPR1O75312 459 aa13.3□□□□□ -0.28
PTPN21-204ENST00000554178 NFIXQ14938 502 aa13.3□□□□□ -0.28
PTPN21-204ENST00000554178 BICDL1Q6ZP65 573 aa13.3□□□□□ -0.28
PTPN21-204ENST00000554178 SMC1BQ8NDV3 1235 aa13.3□□□□□ -0.28
PTPN21-204ENST00000554178 PANK3Q9H999 370 aa13.3□□□□□ -0.28
PTPN21-204ENST00000554178 HSPA1AP0DMV8 641 aaKnown RBP13.29□□□□□ -0.28
PTPN21-204ENST00000554178 HSPA1BP0DMV9 641 aaKnown RBP13.29□□□□□ -0.28
PTPN21-204ENST00000554178 MORC1Q86VD1 984 aa13.29□□□□□ -0.28
PTPN21-204ENST00000554178 CCDC24Q8N4L8 307 aa13.29□□□□□ -0.28
PTPN21-204ENST00000554178 HMOX1P09601 288 aa13.28□□□□□ -0.28
PTPN21-204ENST00000554178 CD44P16070 742 aaKnown RBP13.28□□□□□ -0.28
PTPN21-204ENST00000554178 TM4SF1P30408 202 aa13.28□□□□□ -0.28
PTPN21-204ENST00000554178 C2CD5Q86YS7 1000 aa13.28□□□□□ -0.28
PTPN21-204ENST00000554178 LGR6Q9HBX8 967 aa13.28□□□□□ -0.28
PTPN21-204ENST00000554178 NFKBIEO00221 500 aa13.27□□□□□ -0.29
PTPN21-204ENST00000554178 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.29
PTPN21-204ENST00000554178 LMNB1P20700 586 aa13.27□□□□□ -0.29
PTPN21-204ENST00000554178 SLC52A2Q9HAB3 445 aa13.27□□□□□ -0.29
PTPN21-204ENST00000554178 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.29
PTPN21-204ENST00000554178 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.29
PTPN21-204ENST00000554178 SERPINB2P05120 415 aa13.26□□□□□ -0.29
PTPN21-204ENST00000554178 CYP19A1P11511 503 aaPredicted RBP13.26□□□□□ -0.29
PTPN21-204ENST00000554178 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
PTPN21-204ENST00000554178 IL13P35225 146 aa13.25□□□□□ -0.29
PTPN21-204ENST00000554178 NARFQ9UHQ1 456 aa13.25□□□□□ -0.29
PTPN21-204ENST00000554178 SCN4AP35499 1836 aa13.25□□□□□ -0.29
PTPN21-204ENST00000554178 GLTPD2A6NH11 291 aa13.24□□□□□ -0.29
PTPN21-204ENST00000554178 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
PTPN21-204ENST00000554178 AKAP4Q5JQC9 854 aa13.24□□□□□ -0.29
PTPN21-204ENST00000554178 TTLL6Q8N841 843 aa13.24□□□□□ -0.29
PTPN21-204ENST00000554178 ZC3H4Q9UPT8 1303 aaKnown RBP13.23□□□□□ -0.29
PTPN21-204ENST00000554178 POTEIP0CG38 1075 aa13.23□□□□□ -0.29
PTPN21-204ENST00000554178 POTEJP0CG39 1038 aa13.23□□□□□ -0.29
PTPN21-204ENST00000554178 VEGFAP15692 232 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms