RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 DYNC1I1O14576 645 aa11.03□□□□□ -0.64
AL049839.2-201ENST00000553947 ANXA1P04083 346 aa11.03□□□□□ -0.64
AL049839.2-201ENST00000553947 CBX1P83916 185 aa11.03□□□□□ -0.64
AL049839.2-201ENST00000553947 AKAP4Q5JQC9 854 aa11.03□□□□□ -0.64
AL049839.2-201ENST00000553947 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
AL049839.2-201ENST00000553947 SOS1Q07889 1333 aaPredicted RBP11.02□□□□□ -0.64
AL049839.2-201ENST00000553947 SNX21Q969T3 373 aa11.02□□□□□ -0.65
AL049839.2-201ENST00000553947 CHPF2Q9P2E5 772 aa11.02□□□□□ -0.65
AL049839.2-201ENST00000553947 KDM3BQ7LBC6 1761 aa11.02□□□□□ -0.65
AL049839.2-201ENST00000553947 LMO7Q8WWI1 1683 aa11.02□□□□□ -0.65
AL049839.2-201ENST00000553947 PLEKHO1Q53GL0 409 aaPredicted RBP11.02□□□□□ -0.65
AL049839.2-201ENST00000553947 TSHZ3Q63HK5 1081 aa11.02□□□□□ -0.65
AL049839.2-201ENST00000553947 IPO4Q8TEX9 1081 aaKnown RBP11.02□□□□□ -0.65
AL049839.2-201ENST00000553947 CCDC94Q9BW85 323 aaPredicted RBP11.02□□□□□ -0.65
AL049839.2-201ENST00000553947 C19orf44Q9H6X5 657 aa11.02□□□□□ -0.65
AL049839.2-201ENST00000553947 NCAPD2Q15021 1401 aa11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 BTBD11A6QL63 1104 aa11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 GNAI3P08754 354 aa11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 ZC3H6P61129 1189 aaKnown RBP11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 ATP8B2P98198 1209 aa11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 TEFQ10587 303 aa11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 GBP4Q96PP9 640 aa11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 ZSCAN20P17040 1043 aaPredicted RBP11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 NCOA3Q9Y6Q9 1424 aa11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 CACNA1FO60840 1977 aa11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 RGPD5Q99666 1765 aa11.01□□□□□ -0.65
AL049839.2-201ENST00000553947 PDE1AP54750 535 aa11□□□□□ -0.65
AL049839.2-201ENST00000553947 DNTTIP2Q5QJE6 756 aaKnown RBP11□□□□□ -0.65
AL049839.2-201ENST00000553947 PRAMEF22A3QJZ6 481 aa11□□□□□ -0.65
AL049839.2-201ENST00000553947 DDIT3P35638 169 aa11□□□□□ -0.65
AL049839.2-201ENST00000553947 PXDNLA1KZ92 1463 aa11□□□□□ -0.65
AL049839.2-201ENST00000553947 SKOR2Q2VWA4 1001 aaPredicted RBP11□□□□□ -0.65
AL049839.2-201ENST00000553947 AMOTQ4VCS5 1084 aa11□□□□□ -0.65
AL049839.2-201ENST00000553947 SALL3Q9BXA9 1300 aa11□□□□□ -0.65
AL049839.2-201ENST00000553947 N4BP2Q86UW6 1770 aaPredicted RBP10.99□□□□□ -0.65
AL049839.2-201ENST00000553947 USP26Q9BXU7 913 aa10.99□□□□□ -0.65
AL049839.2-201ENST00000553947 TMEM94Q12767 1356 aa10.99□□□□□ -0.65
AL049839.2-201ENST00000553947 PI4KAP2A4QPH2 592 aa10.99□□□□□ -0.65
AL049839.2-201ENST00000553947 UBTFL1P0CB47 393 aaPredicted RBP10.99□□□□□ -0.65
AL049839.2-201ENST00000553947 MAPK8IP2Q13387 824 aaPredicted RBP10.99□□□□□ -0.65
AL049839.2-201ENST00000553947 C1orf141Q5JVX7 400 aa10.99□□□□□ -0.65
AL049839.2-201ENST00000553947 PI4KAP1Q8N8J0 262 aa10.99□□□□□ -0.65
AL049839.2-201ENST00000553947 OSBPL3Q9H4L5 887 aa10.99□□□□□ -0.65
AL049839.2-201ENST00000553947 IBTKQ9P2D0 1353 aaPredicted RBP10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 STRCP1A6NGW2 1772 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 KIF20AO95235 890 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 NBPF7P0C2Y1 421 aaPredicted RBP10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 CSPP1Q1MSJ5 1256 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 PPP1R9BQ96SB3 815 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 LRRCC1Q9C099 1032 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 MST1RQ04912 1400 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 ERBB3P21860 1342 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 HOXB7P09629 217 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 PROSER3Q2NL68 480 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 SRCIN1Q9C0H9 1055 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 ALS2Q96Q42 1657 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 CAMTA1Q9Y6Y1 1673 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 HSP90AB1P08238 724 aaKnown RBP10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 BEND3Q5T5X7 828 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 CABLES1Q8TDN4 633 aa10.98□□□□□ -0.65
AL049839.2-201ENST00000553947 KIF1AQ12756 1690 aa10.97□□□□□ -0.65
AL049839.2-201ENST00000553947 ADCY9O60503 1353 aa10.97□□□□□ -0.65
AL049839.2-201ENST00000553947 GTPBP4Q9BZE4 634 aaKnown RBP10.97□□□□□ -0.65
AL049839.2-201ENST00000553947 TMEM51Q9NW97 253 aa10.97□□□□□ -0.65
AL049839.2-201ENST00000553947 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
AL049839.2-201ENST00000553947 ATF3P18847 181 aa10.97□□□□□ -0.65
AL049839.2-201ENST00000553947 SSH3Q8TE77 659 aa10.97□□□□□ -0.65
AL049839.2-201ENST00000553947 DNAAF4Q8WXU2 420 aa10.97□□□□□ -0.65
AL049839.2-201ENST00000553947 TNPO1Q92973 898 aaKnown RBP10.97□□□□□ -0.65
AL049839.2-201ENST00000553947 GOLGA6L22H0YM25 854 aa10.96□□□□□ -0.65
AL049839.2-201ENST00000553947 LETM1O95202 739 aaPredicted RBP10.96□□□□□ -0.65
AL049839.2-201ENST00000553947 SASS6Q6UVJ0 657 aa10.96□□□□□ -0.65
AL049839.2-201ENST00000553947 PPP1R42Q7Z4L9 355 aa10.96□□□□□ -0.65
AL049839.2-201ENST00000553947 IL1RAPL2Q9NP60 686 aa10.96□□□□□ -0.65
AL049839.2-201ENST00000553947 DDX49Q9Y6V7 483 aaKnown RBP10.96□□□□□ -0.65
AL049839.2-201ENST00000553947 K7ELQ4 463 aaPredicted RBP10.96□□□□□ -0.66
AL049839.2-201ENST00000553947 ADRA2BP18089 450 aa10.96□□□□□ -0.66
AL049839.2-201ENST00000553947 MX1P20591 662 aa10.96□□□□□ -0.66
AL049839.2-201ENST00000553947 CGNQ9P2M7 1197 aaKnown RBP10.96□□□□□ -0.66
AL049839.2-201ENST00000553947 HEG1Q9ULI3 1381 aa10.95□□□□□ -0.66
AL049839.2-201ENST00000553947 IGSF3O75054 1194 aa10.95□□□□□ -0.66
AL049839.2-201ENST00000553947 HSPA2P54652 639 aa10.95□□□□□ -0.66
AL049839.2-201ENST00000553947 NLRP2Q9NX02 1062 aa10.95□□□□□ -0.66
AL049839.2-201ENST00000553947 TUBGCP6Q96RT7 1819 aa10.95□□□□□ -0.66
AL049839.2-201ENST00000553947 POLA2Q14181 598 aa10.95□□□□□ -0.66
AL049839.2-201ENST00000553947 ZNF830Q96NB3 372 aaPredicted RBP10.95□□□□□ -0.66
AL049839.2-201ENST00000553947 DBF4Q9UBU7 674 aaPredicted RBP10.95□□□□□ -0.66
AL049839.2-201ENST00000553947 NOL7Q9UMY1 257 aaKnown RBP10.95□□□□□ -0.66
AL049839.2-201ENST00000553947 SLC39A6Q13433 755 aa10.94□□□□□ -0.66
AL049839.2-201ENST00000553947 CHRNA2Q15822 529 aa10.94□□□□□ -0.66
AL049839.2-201ENST00000553947 NUTM1Q86Y26 1132 aa10.94□□□□□ -0.66
AL049839.2-201ENST00000553947 UNC5CLQ8IV45 518 aa10.94□□□□□ -0.66
AL049839.2-201ENST00000553947 SIPA1L3O60292 1781 aaPredicted RBP10.94□□□□□ -0.66
AL049839.2-201ENST00000553947 SRGAP3O43295 1099 aa10.94□□□□□ -0.66
AL049839.2-201ENST00000553947 SURF6O75683 361 aaKnown RBP10.94□□□□□ -0.66
AL049839.2-201ENST00000553947 CASC1Q6TDU7 716 aa10.94□□□□□ -0.66
AL049839.2-201ENST00000553947 MAP3K2Q9Y2U5 619 aa10.94□□□□□ -0.66
AL049839.2-201ENST00000553947 OVOS2A0A0G2JMS6 1433 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms