RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 OXCT2Q9BYC2 517 aaPredicted RBP8.09□□□□□ -1.11
UBR7-203ENST00000553857 BNIP3LO60238 219 aa8.08□□□□□ -1.12
UBR7-203ENST00000553857 GDF10P55107 478 aa8.08□□□□□ -1.12
UBR7-203ENST00000553857 PLA2G4EQ3MJ16 856 aa8.08□□□□□ -1.12
UBR7-203ENST00000553857 ESCO1Q5FWF5 840 aa8.08□□□□□ -1.12
UBR7-203ENST00000553857 NDFIP2Q9NV92 336 aa8.08□□□□□ -1.12
UBR7-203ENST00000553857 INHAP05111 366 aa8.07□□□□□ -1.12
UBR7-203ENST00000553857 PLA2G4AP47712 749 aa8.07□□□□□ -1.12
UBR7-203ENST00000553857 CTBSQ01459 385 aa8.07□□□□□ -1.12
UBR7-203ENST00000553857 MCM6Q14566 821 aa8.07□□□□□ -1.12
UBR7-203ENST00000553857 ZNF295-AS1Q8N0V1 137 aa8.07□□□□□ -1.12
UBR7-203ENST00000553857 PLPP7Q8NBV4 271 aa8.07□□□□□ -1.12
UBR7-203ENST00000553857 RHBDD1Q8TEB9 315 aa8.07□□□□□ -1.12
UBR7-203ENST00000553857 DNAAF2Q9NVR5 837 aaKnown RBP8.07□□□□□ -1.12
UBR7-203ENST00000553857 USP3Q9Y6I4 520 aa8.07□□□□□ -1.12
UBR7-203ENST00000553857 CFTRP13569 1480 aa8.06□□□□□ -1.12
UBR7-203ENST00000553857 TMEM229AB2RXF0 380 aa8.06□□□□□ -1.12
UBR7-203ENST00000553857 PRKCSHP14314 528 aaPredicted RBP8.06□□□□□ -1.12
UBR7-203ENST00000553857 ATP4AP20648 1035 aa8.06□□□□□ -1.12
UBR7-203ENST00000553857 GALNT6Q8NCL4 622 aa8.06□□□□□ -1.12
UBR7-203ENST00000553857 SERTAD1Q9UHV2 236 aa8.06□□□□□ -1.12
UBR7-203ENST00000553857 FHAD1B1AJZ9 1412 aa8.05□□□□□ -1.12
UBR7-203ENST00000553857 MAP3K1Q13233 1512 aa8.05□□□□□ -1.12
UBR7-203ENST00000553857 HOXB4P17483 251 aaPredicted RBP8.05□□□□□ -1.12
UBR7-203ENST00000553857 MAP2K3P46734 347 aa8.05□□□□□ -1.12
UBR7-203ENST00000553857 BEND7Q8N7W2 519 aaPredicted RBP8.05□□□□□ -1.12
UBR7-203ENST00000553857 PRM3Q9NNZ6 103 aa8.05□□□□□ -1.12
UBR7-203ENST00000553857 TIMELESSQ9UNS1 1208 aa8.05□□□□□ -1.12
UBR7-203ENST00000553857 NSFL1CQ9UNZ2 370 aaKnown RBP8.05□□□□□ -1.12
UBR7-203ENST00000553857 CCNB3Q8WWL7 1395 aa8.05□□□□□ -1.12
UBR7-203ENST00000553857 CSB-PGBD3P0DP91 1061 aa8.04□□□□□ -1.12
UBR7-203ENST00000553857 GTF2E1P29083 439 aaPredicted RBP8.04□□□□□ -1.12
UBR7-203ENST00000553857 PGBD3Q8N328 593 aa8.04□□□□□ -1.12
UBR7-203ENST00000553857 YTHDC1Q96MU7 727 aaKnown RBP8.04□□□□□ -1.12
UBR7-203ENST00000553857 CRISPLD1Q9H336 500 aa8.04□□□□□ -1.12
UBR7-203ENST00000553857 LRRC4BQ9NT99 713 aa8.04□□□□□ -1.12
UBR7-203ENST00000553857 RRBP1Q9P2E9 1410 aaKnown RBP8.03□□□□□ -1.12
UBR7-203ENST00000553857 PHF20L1A8MW92 1017 aa8.03□□□□□ -1.12
UBR7-203ENST00000553857 FGFR3P22607 806 aa8.03□□□□□ -1.12
UBR7-203ENST00000553857 SMTNP53814 917 aa8.03□□□□□ -1.12
UBR7-203ENST00000553857 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
UBR7-203ENST00000553857 ZCCHC2Q9C0B9 1178 aaKnown RBP8.03□□□□□ -1.12
UBR7-203ENST00000553857 IQSEC3Q9UPP2 1182 aaPredicted RBP8.03□□□□□ -1.12
UBR7-203ENST00000553857 COG6Q9Y2V7 657 aa8.03□□□□□ -1.12
UBR7-203ENST00000553857 IGHA1P01876 353 aa8.02□□□□□ -1.13
UBR7-203ENST00000553857 COL8A1P27658 744 aa8.02□□□□□ -1.13
UBR7-203ENST00000553857 LBRQ14739 615 aaKnown RBP8.02□□□□□ -1.13
UBR7-203ENST00000553857 EFHC2Q5JST6 749 aa8.02□□□□□ -1.13
UBR7-203ENST00000553857 TBC1D9Q6ZT07 1266 aa8.02□□□□□ -1.13
UBR7-203ENST00000553857 EDARADDQ8WWZ3 215 aa8.02□□□□□ -1.13
UBR7-203ENST00000553857 POM121Q96HA1 1249 aa8.02□□□□□ -1.13
UBR7-203ENST00000553857 ATXN7L1Q9ULK2 861 aaPredicted RBP8.02□□□□□ -1.13
UBR7-203ENST00000553857 PHF24Q9UPV7 400 aa8.02□□□□□ -1.13
UBR7-203ENST00000553857 PCDHGA11Q9Y5H2 935 aa8.02□□□□□ -1.13
UBR7-203ENST00000553857 CUX1P39880 1505 aa8.02□□□□□ -1.13
UBR7-203ENST00000553857 ARAP1Q96P48 1450 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 CADPSQ9ULU8 1353 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 PROCP04070 461 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 BMP4P12644 408 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 FOXK2Q01167 660 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 SEMA3FQ13275 785 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 WASHC4Q2M389 1173 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 MAP7D1Q3KQU3 841 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 PODNQ7Z5L7 613 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 AIDAQ96BJ3 306 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 SIRT1Q96EB6 747 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 GGA1Q9UJY5 639 aa8.01□□□□□ -1.13
UBR7-203ENST00000553857 CARMIL1Q5VZK9 1371 aa8□□□□□ -1.13
UBR7-203ENST00000553857 DHX57Q6P158 1386 aaKnown RBP8□□□□□ -1.13
UBR7-203ENST00000553857 KRBA1A5PL33 1030 aa8□□□□□ -1.13
UBR7-203ENST00000553857 MTFR1Q15390 333 aa8□□□□□ -1.13
UBR7-203ENST00000553857 SLC4A9Q96Q91 983 aa8□□□□□ -1.13
UBR7-203ENST00000553857 SUV39H2Q9H5I1 410 aa8□□□□□ -1.13
UBR7-203ENST00000553857 KLF15Q9UIH9 416 aa8□□□□□ -1.13
UBR7-203ENST00000553857 PARP3Q9Y6F1 533 aa8□□□□□ -1.13
UBR7-203ENST00000553857 CUX2O14529 1486 aa8□□□□□ -1.13
UBR7-203ENST00000553857 PRDM2Q13029 1718 aa7.99□□□□□ -1.13
UBR7-203ENST00000553857 LINC00114Q6XXX2 140 aa7.99□□□□□ -1.13
UBR7-203ENST00000553857 NIFKQ9BYG3 293 aaKnown RBP7.99□□□□□ -1.13
UBR7-203ENST00000553857 ALG2Q9H553 416 aa7.99□□□□□ -1.13
UBR7-203ENST00000553857 A0A1W2PNR3 127 aa7.98□□□□□ -1.13
UBR7-203ENST00000553857 DCDC2BA2VCK2 349 aa7.98□□□□□ -1.13
UBR7-203ENST00000553857 A6NJY4 79 aa7.98□□□□□ -1.13
UBR7-203ENST00000553857 MSTNO14793 375 aa7.98□□□□□ -1.13
UBR7-203ENST00000553857 GOLGA6L1Q8N7Z2 621 aa7.98□□□□□ -1.13
UBR7-203ENST00000553857 RRAGCQ9HB90 399 aa7.98□□□□□ -1.13
UBR7-203ENST00000553857 GDF2Q9UK05 429 aaPredicted RBP7.98□□□□□ -1.13
UBR7-203ENST00000553857 NEURL1BA8MQ27 555 aa7.97□□□□□ -1.13
UBR7-203ENST00000553857 CD33P20138 364 aa7.97□□□□□ -1.13
UBR7-203ENST00000553857 SLCO4C1Q6ZQN7 724 aa7.97□□□□□ -1.13
UBR7-203ENST00000553857 DEPDC4Q8N2C3 294 aa7.97□□□□□ -1.13
UBR7-203ENST00000553857 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.97□□□□□ -1.13
UBR7-203ENST00000553857 ZIC5Q96T25 663 aa7.97□□□□□ -1.13
UBR7-203ENST00000553857 PCDHGC4Q9Y5F7 938 aa7.97□□□□□ -1.13
UBR7-203ENST00000553857 SETD5Q9C0A6 1442 aa7.96□□□□□ -1.13
UBR7-203ENST00000553857 CDK2AP1O14519 115 aa7.96□□□□□ -1.14
UBR7-203ENST00000553857 ATXN7O15265 892 aaPredicted RBP7.96□□□□□ -1.14
UBR7-203ENST00000553857 MAPTP10636 758 aaKnown RBP7.96□□□□□ -1.14
UBR7-203ENST00000553857 EPXP11678 715 aa7.96□□□□□ -1.14
UBR7-203ENST00000553857 SKIP12755 728 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms