RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 DDX49Q9Y6V7 483 aaKnown RBP12.27□□□□□ -0.44
CFAP54-204ENST00000553778 U2SURPO15042 1029 aaKnown RBP12.27□□□□□ -0.45
CFAP54-204ENST00000553778 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.45
CFAP54-204ENST00000553778 IGSF1Q8N6C5 1336 aa12.26□□□□□ -0.45
CFAP54-204ENST00000553778 KIAA2012Q0VF49 1180 aa12.26□□□□□ -0.45
CFAP54-204ENST00000553778 DISP2A7MBM2 1401 aa12.26□□□□□ -0.45
CFAP54-204ENST00000553778 ZCRB1Q8TBF4 217 aaKnown RBP12.25□□□□□ -0.45
CFAP54-204ENST00000553778 FEZ1Q99689 392 aa12.25□□□□□ -0.45
CFAP54-204ENST00000553778 COG6Q9Y2V7 657 aa12.25□□□□□ -0.45
CFAP54-204ENST00000553778 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
CFAP54-204ENST00000553778 THSD7AQ9UPZ6 1657 aa12.25□□□□□ -0.45
CFAP54-204ENST00000553778 MFAP1P55081 439 aaKnown RBP12.25□□□□□ -0.45
CFAP54-204ENST00000553778 FAM182BQ5T319 152 aa12.25□□□□□ -0.45
CFAP54-204ENST00000553778 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
CFAP54-204ENST00000553778 PCDHB15Q9Y5E8 787 aa12.25□□□□□ -0.45
CFAP54-204ENST00000553778 BAG4O95429 457 aaKnown RBP12.24□□□□□ -0.45
CFAP54-204ENST00000553778 HMOX1P09601 288 aa12.24□□□□□ -0.45
CFAP54-204ENST00000553778 ZSCAN23Q3MJ62 389 aa12.24□□□□□ -0.45
CFAP54-204ENST00000553778 FAM196AQ6ZSG2 479 aa12.24□□□□□ -0.45
CFAP54-204ENST00000553778 DDX54Q8TDD1 881 aaKnown RBP12.24□□□□□ -0.45
CFAP54-204ENST00000553778 SPG7Q9UQ90 795 aa12.24□□□□□ -0.45
CFAP54-204ENST00000553778 GABPB1Q06547 395 aaPredicted RBP12.23□□□□□ -0.45
CFAP54-204ENST00000553778 MARCH10Q8NA82 808 aaPredicted RBP12.23□□□□□ -0.45
CFAP54-204ENST00000553778 RBSNQ9H1K0 784 aa12.23□□□□□ -0.45
CFAP54-204ENST00000553778 U2AF1L5P0DN76 240 aaPredicted RBP12.23□□□□□ -0.45
CFAP54-204ENST00000553778 CBX1P83916 185 aa12.23□□□□□ -0.45
CFAP54-204ENST00000553778 U2AF1Q01081 240 aaKnown RBP eCLIP12.23□□□□□ -0.45
CFAP54-204ENST00000553778 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
CFAP54-204ENST00000553778 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
CFAP54-204ENST00000553778 FTSJ3Q8IY81 847 aaKnown RBP12.23□□□□□ -0.45
CFAP54-204ENST00000553778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.23□□□□□ -0.45
CFAP54-204ENST00000553778 KIF3AQ9Y496 699 aa12.23□□□□□ -0.45
CFAP54-204ENST00000553778 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
CFAP54-204ENST00000553778 PARP4Q9UKK3 1724 aaKnown RBP12.22□□□□□ -0.45
CFAP54-204ENST00000553778 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
CFAP54-204ENST00000553778 K7ELQ4 463 aaPredicted RBP12.22□□□□□ -0.45
CFAP54-204ENST00000553778 NUCB2P80303 420 aa12.22□□□□□ -0.45
CFAP54-204ENST00000553778 HDAC1Q13547 482 aaPredicted RBP12.22□□□□□ -0.45
CFAP54-204ENST00000553778 AMOTQ4VCS5 1084 aa12.22□□□□□ -0.45
CFAP54-204ENST00000553778 PLEKHO1Q53GL0 409 aaPredicted RBP12.22□□□□□ -0.45
CFAP54-204ENST00000553778 PANK1Q8TE04 598 aa12.22□□□□□ -0.45
CFAP54-204ENST00000553778 MEGF6O75095 1541 aa12.22□□□□□ -0.45
CFAP54-204ENST00000553778 BRWD3Q6RI45 1802 aa12.22□□□□□ -0.45
CFAP54-204ENST00000553778 OVOS2A0A0G2JMS6 1433 aa12.22□□□□□ -0.45
CFAP54-204ENST00000553778 COL3A1P02461 1466 aaPredicted RBP12.22□□□□□ -0.45
CFAP54-204ENST00000553778 CDK11BP21127 795 aaKnown RBP12.21□□□□□ -0.45
CFAP54-204ENST00000553778 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
CFAP54-204ENST00000553778 TNS2Q63HR2 1409 aa12.21□□□□□ -0.45
CFAP54-204ENST00000553778 FAM193AP78312 1265 aa12.21□□□□□ -0.46
CFAP54-204ENST00000553778 ATP2B3Q16720 1220 aa12.21□□□□□ -0.46
CFAP54-204ENST00000553778 LRSAM1Q6UWE0 723 aa12.21□□□□□ -0.46
CFAP54-204ENST00000553778 PIBF1Q8WXW3 757 aa12.21□□□□□ -0.46
CFAP54-204ENST00000553778 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.46
CFAP54-204ENST00000553778 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.46
CFAP54-204ENST00000553778 KDRP35968 1356 aa12.21□□□□□ -0.46
CFAP54-204ENST00000553778 SOCS7O14512 581 aa12.2□□□□□ -0.46
CFAP54-204ENST00000553778 FCHSD2O94868 740 aa12.2□□□□□ -0.46
CFAP54-204ENST00000553778 CCDC125Q86Z20 511 aa12.2□□□□□ -0.46
CFAP54-204ENST00000553778 ZNF830Q96NB3 372 aaPredicted RBP12.2□□□□□ -0.46
CFAP54-204ENST00000553778 DNAJC2Q99543 621 aaKnown RBP12.2□□□□□ -0.46
CFAP54-204ENST00000553778 WNK3Q9BYP7 1800 aa12.2□□□□□ -0.46
CFAP54-204ENST00000553778 LRRC37A3O60309 1634 aa12.2□□□□□ -0.46
CFAP54-204ENST00000553778 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
CFAP54-204ENST00000553778 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
CFAP54-204ENST00000553778 IFNL2Q8IZJ0 200 aa12.19□□□□□ -0.46
CFAP54-204ENST00000553778 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
CFAP54-204ENST00000553778 CCDC66A2RUB6 948 aa12.19□□□□□ -0.46
CFAP54-204ENST00000553778 CYP2E1P05181 493 aaPredicted RBP12.19□□□□□ -0.46
CFAP54-204ENST00000553778 ANKRD7Q92527 254 aa12.19□□□□□ -0.46
CFAP54-204ENST00000553778 UPF1Q92900 1129 aaKnown RBP eCLIP12.19□□□□□ -0.46
CFAP54-204ENST00000553778 LMBRD1Q9NUN5 540 aa12.19□□□□□ -0.46
CFAP54-204ENST00000553778 RGPD1P0DJD0 1748 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 RARSP54136 660 aaKnown RBP12.18□□□□□ -0.46
CFAP54-204ENST00000553778 SYCP1Q15431 976 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 PDCL2Q8N4E4 241 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 SPTLC3Q9NUV7 552 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 OGFRQ9NZT2 677 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 CYP27B1O15528 508 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 TRIM37O94972 964 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 SSFA2P28290 1259 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 PRKAR2BP31323 418 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
CFAP54-204ENST00000553778 C1orf141Q5JVX7 400 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 KLHL34Q8N239 644 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 KIF2CQ99661 725 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 ARID3AQ99856 593 aa12.18□□□□□ -0.46
CFAP54-204ENST00000553778 APAF1O14727 1248 aa12.17□□□□□ -0.46
CFAP54-204ENST00000553778 PHKG2P15735 406 aa12.17□□□□□ -0.46
CFAP54-204ENST00000553778 FKBP5Q13451 457 aaPredicted RBP12.17□□□□□ -0.46
CFAP54-204ENST00000553778 CAVIN1Q6NZI2 390 aaKnown RBP12.17□□□□□ -0.46
CFAP54-204ENST00000553778 CREBRFQ8IUR6 639 aa12.17□□□□□ -0.46
CFAP54-204ENST00000553778 TSPYL1Q9H0U9 437 aa12.17□□□□□ -0.46
CFAP54-204ENST00000553778 CHRM1P11229 460 aaPredicted RBP12.16□□□□□ -0.46
CFAP54-204ENST00000553778 DNTTIP2Q5QJE6 756 aaKnown RBP12.16□□□□□ -0.46
CFAP54-204ENST00000553778 ZNF530Q6P9A1 599 aaPredicted RBP12.16□□□□□ -0.46
CFAP54-204ENST00000553778 ACSBG1Q96GR2 724 aa12.16□□□□□ -0.46
CFAP54-204ENST00000553778 DIAPH3Q9NSV4 1193 aa12.16□□□□□ -0.46
CFAP54-204ENST00000553778 BCL9O00512 1426 aa12.16□□□□□ -0.46
CFAP54-204ENST00000553778 MVPQ14764 893 aaKnown RBP12.16□□□□□ -0.46
CFAP54-204ENST00000553778 MTHFSDQ2M296 383 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms