RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 IDI1Q13907 227 aa7.06□□□□□ -1.28
VTI1B-202ENST00000553619 SH3BP5LQ7L8J4 393 aa7.06□□□□□ -1.28
VTI1B-202ENST00000553619 SH3RF1Q7Z6J0 888 aa7.06□□□□□ -1.28
VTI1B-202ENST00000553619 NPAS3Q8IXF0 933 aa7.06□□□□□ -1.28
VTI1B-202ENST00000553619 NOS1P29475 1434 aa7.06□□□□□ -1.28
VTI1B-202ENST00000553619 MROH2AA6NES4 1674 aa7.06□□□□□ -1.28
VTI1B-202ENST00000553619 SETD1BQ9UPS6 1966 aaKnown RBP7.06□□□□□ -1.28
VTI1B-202ENST00000553619 NEURL4Q96JN8 1562 aa7.05□□□□□ -1.28
VTI1B-202ENST00000553619 MAGEB6P1A0A0J9YX57 407 aa7.05□□□□□ -1.28
VTI1B-202ENST00000553619 FSHRP23945 695 aa7.05□□□□□ -1.28
VTI1B-202ENST00000553619 C6orf118Q5T5N4 469 aa7.05□□□□□ -1.28
VTI1B-202ENST00000553619 NBPF14Q5TI25 921 aa7.05□□□□□ -1.28
VTI1B-202ENST00000553619 FBXO31Q5XUX0 539 aaPredicted RBP7.05□□□□□ -1.28
VTI1B-202ENST00000553619 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.05□□□□□ -1.28
VTI1B-202ENST00000553619 ARMC2Q8NEN0 867 aa7.05□□□□□ -1.28
VTI1B-202ENST00000553619 IRF7Q92985 503 aa7.05□□□□□ -1.28
VTI1B-202ENST00000553619 DDRGK1Q96HY6 314 aa7.05□□□□□ -1.28
VTI1B-202ENST00000553619 PREX1Q8TCU6 1659 aa7.04□□□□□ -1.28
VTI1B-202ENST00000553619 CARD14Q9BXL6 1004 aa7.04□□□□□ -1.28
VTI1B-202ENST00000553619 FER1L4A9Z1Z3 1794 aa7.03□□□□□ -1.28
VTI1B-202ENST00000553619 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
VTI1B-202ENST00000553619 CTDSPL2Q05D32 466 aa7.03□□□□□ -1.28
VTI1B-202ENST00000553619 TRMT44Q8IYL2 757 aaKnown RBP7.03□□□□□ -1.28
VTI1B-202ENST00000553619 THEMISQ8N1K5 641 aaPredicted RBP7.03□□□□□ -1.28
VTI1B-202ENST00000553619 MEIOBQ8N635 442 aa7.03□□□□□ -1.28
VTI1B-202ENST00000553619 MAP4K5Q9Y4K4 846 aa7.03□□□□□ -1.28
VTI1B-202ENST00000553619 SIGLEC1Q9BZZ2 1709 aa7.03□□□□□ -1.28
VTI1B-202ENST00000553619 TNRQ92752 1358 aa7.03□□□□□ -1.28
VTI1B-202ENST00000553619 ERVK-7P63135 1459 aa7.03□□□□□ -1.28
VTI1B-202ENST00000553619 CLTCL1P53675 1640 aa7.02□□□□□ -1.29
VTI1B-202ENST00000553619 CEBPAP49715 358 aaPredicted RBP7.02□□□□□ -1.29
VTI1B-202ENST00000553619 EIF4G2P78344 907 aaKnown RBP eCLIP7.02□□□□□ -1.29
VTI1B-202ENST00000553619 VASH1Q7L8A9 365 aaPredicted RBP7.02□□□□□ -1.29
VTI1B-202ENST00000553619 LINC00528Q8N1L1 170 aa7.02□□□□□ -1.29
VTI1B-202ENST00000553619 SPATA31D1Q6ZQQ2 1576 aa7.02□□□□□ -1.29
VTI1B-202ENST00000553619 UHRF1BP1Q6BDS2 1440 aa7.01□□□□□ -1.29
VTI1B-202ENST00000553619 SPATA31E1Q6ZUB1 1445 aa7.01□□□□□ -1.29
VTI1B-202ENST00000553619 BMP2P12643 396 aa7.01□□□□□ -1.29
VTI1B-202ENST00000553619 NBPF8Q3BBV2 869 aa7.01□□□□□ -1.29
VTI1B-202ENST00000553619 ERFEQ4G0M1 354 aa7.01□□□□□ -1.29
VTI1B-202ENST00000553619 LRRN4Q8WUT4 740 aa7.01□□□□□ -1.29
VTI1B-202ENST00000553619 KDM4CQ9H3R0 1056 aa7.01□□□□□ -1.29
VTI1B-202ENST00000553619 GPBP1L1Q9HC44 474 aaPredicted RBP7.01□□□□□ -1.29
VTI1B-202ENST00000553619 EID1Q9Y6B2 187 aa7.01□□□□□ -1.29
VTI1B-202ENST00000553619 ADAMTSL3P82987 1691 aa7□□□□□ -1.29
VTI1B-202ENST00000553619 NLRP1Q9C000 1473 aa7□□□□□ -1.29
VTI1B-202ENST00000553619 MAN1A2O60476 641 aa7□□□□□ -1.29
VTI1B-202ENST00000553619 ZSCAN1Q8NBB4 408 aa7□□□□□ -1.29
VTI1B-202ENST00000553619 CARD11Q9BXL7 1154 aa7□□□□□ -1.29
VTI1B-202ENST00000553619 PIK3C2BO00750 1634 aa7□□□□□ -1.29
VTI1B-202ENST00000553619 SYNMO15061 1565 aa6.99□□□□□ -1.29
VTI1B-202ENST00000553619 CCDC116Q8IYX3 515 aa6.99□□□□□ -1.29
VTI1B-202ENST00000553619 PROCA1Q8NCQ7 364 aaPredicted RBP6.99□□□□□ -1.29
VTI1B-202ENST00000553619 GPKOWQ92917 476 aaPredicted RBP eCLIP6.99□□□□□ -1.29
VTI1B-202ENST00000553619 ZFYVE9O95405 1425 aa6.99□□□□□ -1.29
VTI1B-202ENST00000553619 C3P01024 1663 aa6.99□□□□□ -1.29
VTI1B-202ENST00000553619 RIMS1Q86UR5 1692 aaKnown RBP6.99□□□□□ -1.29
VTI1B-202ENST00000553619 ROCK2O75116 1388 aaKnown RBP6.98□□□□□ -1.29
VTI1B-202ENST00000553619 KDM5AP29375 1690 aaKnown RBP6.98□□□□□ -1.29
VTI1B-202ENST00000553619 UPP2O95045 317 aa6.98□□□□□ -1.29
VTI1B-202ENST00000553619 VSIG8P0DPA2 414 aa6.98□□□□□ -1.29
VTI1B-202ENST00000553619 SKIV2LQ15477 1246 aaKnown RBP6.98□□□□□ -1.29
VTI1B-202ENST00000553619 SH3D19Q5HYK7 790 aa6.98□□□□□ -1.29
VTI1B-202ENST00000553619 C14orf93Q9H972 538 aaKnown RBP6.98□□□□□ -1.29
VTI1B-202ENST00000553619 FKBPLQ9UIM3 349 aa6.98□□□□□ -1.29
VTI1B-202ENST00000553619 DNMT3LQ9UJW3 386 aa6.98□□□□□ -1.29
VTI1B-202ENST00000553619 PRAG1Q86YV5 1406 aa6.98□□□□□ -1.29
VTI1B-202ENST00000553619 SOS2Q07890 1332 aaPredicted RBP6.98□□□□□ -1.29
VTI1B-202ENST00000553619 MYOM2P54296 1465 aa6.98□□□□□ -1.29
VTI1B-202ENST00000553619 MADDQ8WXG6 1647 aa6.98□□□□□ -1.29
VTI1B-202ENST00000553619 ADGRB3O60242 1522 aa6.97□□□□□ -1.29
VTI1B-202ENST00000553619 NR6A1Q15406 480 aa6.97□□□□□ -1.29
VTI1B-202ENST00000553619 PNMA1Q8ND90 353 aa6.97□□□□□ -1.29
VTI1B-202ENST00000553619 ARHGAP9Q9BRR9 750 aa6.97□□□□□ -1.29
VTI1B-202ENST00000553619 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.97□□□□□ -1.29
VTI1B-202ENST00000553619 FAM117AQ9C073 453 aa6.97□□□□□ -1.29
VTI1B-202ENST00000553619 UGGT1Q9NYU2 1555 aa6.97□□□□□ -1.29
VTI1B-202ENST00000553619 EMILIN1Q9Y6C2 1016 aa6.97□□□□□ -1.29
VTI1B-202ENST00000553619 TMEM131LA2VDJ0 1609 aa6.97□□□□□ -1.29
VTI1B-202ENST00000553619 ADGRF5Q8IZF2 1346 aa6.97□□□□□ -1.29
VTI1B-202ENST00000553619 KIAA1210Q9ULL0 1709 aa6.96□□□□□ -1.29
VTI1B-202ENST00000553619 RIMS2Q9UQ26 1411 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 PPLO60437 1756 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 PPFIA3O75145 1194 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 HSPA5P11021 654 aaKnown RBP6.96□□□□□ -1.3
VTI1B-202ENST00000553619 CBLBQ13191 982 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 CFAP70Q5T0N1 1121 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 PPP1R26Q5T8A7 1209 aaPredicted RBP6.96□□□□□ -1.3
VTI1B-202ENST00000553619 PDXDC2PQ6P474 469 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 TXNDC2Q86VQ3 553 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 ANKLE2Q86XL3 938 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 OCSTAMPQ9BR26 566 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 A2ML1A8K2U0 1454 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 RALGAPBQ86X10 1494 aa6.96□□□□□ -1.3
VTI1B-202ENST00000553619 MYO5BQ9ULV0 1848 aa6.95□□□□□ -1.3
VTI1B-202ENST00000553619 FAM181BA6NEQ2 426 aa6.95□□□□□ -1.3
VTI1B-202ENST00000553619 NEUROD2Q15784 382 aa6.95□□□□□ -1.3
VTI1B-202ENST00000553619 NBPF1Q3BBV0 1214 aa6.95□□□□□ -1.3
VTI1B-202ENST00000553619 SLC10A4Q96EP9 437 aa6.95□□□□□ -1.3
VTI1B-202ENST00000553619 TSEN34Q9BSV6 310 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms