RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 CITED4Q96RK1 184 aa6.25□□□□□ -1.41
TDP1-207ENST00000553617 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.25□□□□□ -1.412e-9■■■■■ 223.6
TDP1-207ENST00000553617 STIM2Q9P246 746 aa6.25□□□□□ -1.41
TDP1-207ENST00000553617 USP3Q9Y6I4 520 aa6.25□□□□□ -1.41
TDP1-207ENST00000553617 WNT7AO00755 349 aa6.24□□□□□ -1.41
TDP1-207ENST00000553617 CDK2AP1O14519 115 aa6.24□□□□□ -1.41
TDP1-207ENST00000553617 NDUFB5O43674 189 aa6.24□□□□□ -1.41
TDP1-207ENST00000553617 SLC19A1P41440 591 aa6.24□□□□□ -1.41
TDP1-207ENST00000553617 MRPL58Q14197 206 aaKnown RBP6.24□□□□□ -1.41
TDP1-207ENST00000553617 KDF1Q8NAX2 398 aaPredicted RBP6.24□□□□□ -1.41
TDP1-207ENST00000553617 FAM129BQ96TA1 746 aa6.24□□□□□ -1.41
TDP1-207ENST00000553617 ARHGEF10LQ9HCE6 1279 aa6.24□□□□□ -1.41
TDP1-207ENST00000553617 RAB6BQ9NRW1 208 aa6.24□□□□□ -1.41
TDP1-207ENST00000553617 LRFN2Q9ULH4 789 aa6.24□□□□□ -1.41
TDP1-207ENST00000553617 FAM26DQ5JW98 314 aa6.23□□□□□ -1.41
TDP1-207ENST00000553617 ALKBH2Q6NS38 261 aa6.23□□□□□ -1.41
TDP1-207ENST00000553617 MRGPRX2Q96LB1 330 aa6.23□□□□□ -1.41
TDP1-207ENST00000553617 CCDC87Q9NVE4 849 aa6.23□□□□□ -1.41
TDP1-207ENST00000553617 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
TDP1-207ENST00000553617 BRPF3Q9ULD4 1205 aa6.23□□□□□ -1.41
TDP1-207ENST00000553617 EMILIN1Q9Y6C2 1016 aa6.23□□□□□ -1.41
TDP1-207ENST00000553617 EML1O00423 815 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 GPR182O15218 404 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 ADH1AP07327 375 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 TEAD4Q15561 434 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 LDLRAD1Q5T700 205 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 SPRYD7Q5W111 196 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 ABTB2Q8N961 1025 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 CNKSR1Q969H4 720 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 ALKBH8Q96BT7 664 aaKnown RBP6.22□□□□□ -1.41
TDP1-207ENST00000553617 DMRTB1Q96MA1 342 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 C8orf37Q96NL8 207 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 ESYT1Q9BSJ8 1104 aa6.22□□□□□ -1.41
TDP1-207ENST00000553617 FHDC1Q9C0D6 1143 aaPredicted RBP6.22□□□□□ -1.41
TDP1-207ENST00000553617 CLN3Q13286 438 aa6.21□□□□□ -1.42
TDP1-207ENST00000553617 TLR1Q15399 786 aa6.21□□□□□ -1.42
TDP1-207ENST00000553617 ZDHHC1Q8WTX9 485 aa6.21□□□□□ -1.42
TDP1-207ENST00000553617 SHROOM4Q9ULL8 1493 aa6.21□□□□□ -1.42
TDP1-207ENST00000553617 ZBTB39O15060 712 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 PRR20EP86478 221 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 PRR20CP86479 221 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 PRR20DP86480 221 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 PRR20BP86481 221 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 PRR20AP86496 221 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 EHHADHQ08426 723 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 SH3PXD2AQ5TCZ1 1133 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 Q6ZVU0 165 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 ZNF598Q86UK7 904 aaKnown RBP6.2□□□□□ -1.42
TDP1-207ENST00000553617 GJD3Q8N144 294 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 NBPF15Q8N660 670 aa6.2□□□□□ -1.42
TDP1-207ENST00000553617 ZNF775Q96BV0 537 aaPredicted RBP6.2□□□□□ -1.42
TDP1-207ENST00000553617 SERTM1A2A2V5 107 aa6.19□□□□□ -1.42
TDP1-207ENST00000553617 PRPF40AO75400 957 aaKnown RBP6.19□□□□□ -1.42
TDP1-207ENST00000553617 DGAT1O75907 488 aa6.19□□□□□ -1.42
TDP1-207ENST00000553617 BRD2P25440 801 aaKnown RBP6.19□□□□□ -1.42
TDP1-207ENST00000553617 NOS2P35228 1153 aa6.19□□□□□ -1.42
TDP1-207ENST00000553617 RTN1Q16799 776 aa6.19□□□□□ -1.42
TDP1-207ENST00000553617 TSNAXIP1Q2TAA8 658 aa6.19□□□□□ -1.42
TDP1-207ENST00000553617 KLF16Q9BXK1 252 aaPredicted RBP6.19□□□□□ -1.42
TDP1-207ENST00000553617 BACH2Q9BYV9 841 aa6.19□□□□□ -1.42
TDP1-207ENST00000553617 USP35Q9P2H5 1018 aa6.19□□□□□ -1.42
TDP1-207ENST00000553617 CHMP3Q9Y3E7 222 aa6.19□□□□□ -1.42
TDP1-207ENST00000553617 LDHBP07195 334 aaKnown RBP6.18□□□□□ -1.42
TDP1-207ENST00000553617 PTGIRP43119 386 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 PLCB3Q01970 1234 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 CENPCQ03188 943 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 CBLBQ13191 982 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 PDE3BQ13370 1112 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 NNTQ13423 1086 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 PKDCCQ504Y2 493 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 ATCAYQ86WG3 371 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 PPARGC1BQ86YN6 1023 aaKnown RBP6.18□□□□□ -1.42
TDP1-207ENST00000553617 ETFBKMTQ8IXQ9 262 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 ALDH16A1Q8IZ83 802 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 BCL11AQ9H165 835 aa6.18□□□□□ -1.42
TDP1-207ENST00000553617 MZF1P28698 734 aaPredicted RBP6.17□□□□□ -1.42
TDP1-207ENST00000553617 MAPK8P45983 427 aa6.17□□□□□ -1.42
TDP1-207ENST00000553617 ZC3H6P61129 1189 aaKnown RBP6.17□□□□□ -1.42
TDP1-207ENST00000553617 FGD1P98174 961 aa6.17□□□□□ -1.42
TDP1-207ENST00000553617 FOXC1Q12948 553 aa6.17□□□□□ -1.42
TDP1-207ENST00000553617 C11orf91Q3C1V1 193 aa6.17□□□□□ -1.42
TDP1-207ENST00000553617 ZNF697Q5TEC3 545 aa6.17□□□□□ -1.42
TDP1-207ENST00000553617 TMC4Q7Z404 712 aa6.17□□□□□ -1.42
TDP1-207ENST00000553617 L3MBTL2Q969R5 705 aa6.17□□□□□ -1.42
TDP1-207ENST00000553617 PKD2L1Q9P0L9 805 aa6.17□□□□□ -1.42
TDP1-207ENST00000553617 PARP2Q9UGN5 583 aa6.17□□□□□ -1.42
TDP1-207ENST00000553617 GDF9O60383 454 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 ALDH1A1P00352 501 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 DAB2P98082 770 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 AAMPQ13685 434 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 ENOX2Q16206 610 aaKnown RBP6.16□□□□□ -1.42
TDP1-207ENST00000553617 TMC1Q8TDI8 760 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 ITPKCQ96DU7 683 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 NGLY1Q96IV0 654 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 DUSP9Q99956 384 aaKnown RBP6.16□□□□□ -1.42
TDP1-207ENST00000553617 RNF19AQ9NV58 838 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 CABP1Q9NZU7 370 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 WWC3Q9ULE0 1092 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 POLIQ9UNA4 740 aa6.16□□□□□ -1.42
TDP1-207ENST00000553617 SCAMP3O14828 347 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms