RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 VAMP4O75379 141 aa24.92■■□□□ 1.58
PSEN1-207ENST00000553599 CYP19A1P11511 503 aaPredicted RBP24.92■■□□□ 1.58
PSEN1-207ENST00000553599 RC3H1Q5TC82 1133 aaKnown RBP24.92■■□□□ 1.58
PSEN1-207ENST00000553599 USP16Q9Y5T5 823 aa24.92■■□□□ 1.58
PSEN1-207ENST00000553599 CNTNAP4Q9C0A0 1308 aa24.91■■□□□ 1.58
PSEN1-207ENST00000553599 ELL2O00472 640 aaPredicted RBP24.91■■□□□ 1.58
PSEN1-207ENST00000553599 PRAMEF22A3QJZ6 481 aa24.9■■□□□ 1.58
PSEN1-207ENST00000553599 HDGFL1Q5TGJ6 251 aa24.9■■□□□ 1.58
PSEN1-207ENST00000553599 LINC00116Q8NCU8 138 aa24.9■■□□□ 1.58
PSEN1-207ENST00000553599 CCDC30Q5VVM6 783 aa24.89■■□□□ 1.58
PSEN1-207ENST00000553599 KCNQ4P56696 695 aa24.88■■□□□ 1.57
PSEN1-207ENST00000553599 CCDC87Q9NVE4 849 aa24.88■■□□□ 1.57
PSEN1-207ENST00000553599 C4BP0C0L5 1744 aa24.88■■□□□ 1.57
PSEN1-207ENST00000553599 EIF2S2P20042 333 aaKnown RBP24.87■■□□□ 1.57
PSEN1-207ENST00000553599 CRKLP46109 303 aaKnown RBP24.87■■□□□ 1.57
PSEN1-207ENST00000553599 DBF4Q9UBU7 674 aaPredicted RBP24.86■■□□□ 1.57
PSEN1-207ENST00000553599 ALDH1L2Q3SY69 923 aa24.85■■□□□ 1.57
PSEN1-207ENST00000553599 STK31Q9BXU1 1019 aa24.85■■□□□ 1.57
PSEN1-207ENST00000553599 NUP188Q5SRE5 1749 aa24.85■■□□□ 1.57
PSEN1-207ENST00000553599 INTS5Q6P9B9 1019 aaKnown RBP24.84■■□□□ 1.57
PSEN1-207ENST00000553599 AK7Q96M32 723 aa24.84■■□□□ 1.57
PSEN1-207ENST00000553599 DDX21Q9NR30 783 aaKnown RBP eCLIP24.84■■□□□ 1.57
PSEN1-207ENST00000553599 A1BGP04217 495 aa24.83■■□□□ 1.57
PSEN1-207ENST00000553599 IL6STP40189 918 aaPredicted RBP24.83■■□□□ 1.57
PSEN1-207ENST00000553599 NBPF14Q5TI25 921 aa24.82■■□□□ 1.56
PSEN1-207ENST00000553599 AKT1S1Q96B36 256 aa24.82■■□□□ 1.56
PSEN1-207ENST00000553599 CACNA1FO60840 1977 aa24.82■■□□□ 1.56
PSEN1-207ENST00000553599 RPS6KA4O75676 772 aa24.81■■□□□ 1.56
PSEN1-207ENST00000553599 HYPKQ9NX55 129 aa24.81■■□□□ 1.56
PSEN1-207ENST00000553599 CHPF2Q9P2E5 772 aa24.81■■□□□ 1.56
PSEN1-207ENST00000553599 ZBTB1Q9Y2K1 713 aa24.81■■□□□ 1.56
PSEN1-207ENST00000553599 MYH14Q7Z406 1995 aaKnown RBP24.81■■□□□ 1.56
PSEN1-207ENST00000553599 NBPF26B4DH59 902 aa24.8■■□□□ 1.56
PSEN1-207ENST00000553599 ADRA2BP18089 450 aa24.8■■□□□ 1.56
PSEN1-207ENST00000553599 PDIA6Q15084 440 aa24.8■■□□□ 1.56
PSEN1-207ENST00000553599 NBPF10Q6P3W6 841 aaKnown RBP24.8■■□□□ 1.56
PSEN1-207ENST00000553599 NPM2Q86SE8 214 aaKnown RBP24.8■■□□□ 1.56
PSEN1-207ENST00000553599 NBPF15Q8N660 670 aa24.8■■□□□ 1.56
PSEN1-207ENST00000553599 NECTIN2Q92692 538 aa24.8■■□□□ 1.56
PSEN1-207ENST00000553599 STK32BQ9NY57 414 aa24.8■■□□□ 1.56
PSEN1-207ENST00000553599 RTCBQ9Y3I0 505 aaKnown RBP24.8■■□□□ 1.56
PSEN1-207ENST00000553599 SOCS7O14512 581 aa24.79■■□□□ 1.56
PSEN1-207ENST00000553599 GNPATO15228 680 aa24.79■■□□□ 1.56
PSEN1-207ENST00000553599 CANXP27824 592 aaKnown RBP24.79■■□□□ 1.56
PSEN1-207ENST00000553599 RARSP54136 660 aaKnown RBP24.79■■□□□ 1.56
PSEN1-207ENST00000553599 EIF5P55010 431 aaKnown RBP24.79■■□□□ 1.56
PSEN1-207ENST00000553599 A0A087WZG4 1122 aa24.78■■□□□ 1.56
PSEN1-207ENST00000553599 SSFA2P28290 1259 aa24.78■■□□□ 1.56
PSEN1-207ENST00000553599 BRPF1P55201 1214 aaPredicted RBP24.78■■□□□ 1.56
PSEN1-207ENST00000553599 SLC15A2Q16348 729 aa24.78■■□□□ 1.56
PSEN1-207ENST00000553599 FLAD1Q8NFF5 587 aa24.78■■□□□ 1.56
PSEN1-207ENST00000553599 SLC4A2P04920 1241 aa24.77■■□□□ 1.56
PSEN1-207ENST00000553599 SSH1Q8WYL5 1049 aa24.77■■□□□ 1.56
PSEN1-207ENST00000553599 TFCP2L1Q9NZI6 479 aa24.77■■□□□ 1.56
PSEN1-207ENST00000553599 ZNF827Q17R98 1081 aa24.76■■□□□ 1.55
PSEN1-207ENST00000553599 UBR3Q6ZT12 1888 aa24.76■■□□□ 1.55
PSEN1-207ENST00000553599 MYL6BP14649 208 aa24.75■■□□□ 1.55
PSEN1-207ENST00000553599 PROSER3Q2NL68 480 aa24.75■■□□□ 1.55
PSEN1-207ENST00000553599 LRP10Q7Z4F1 713 aa24.75■■□□□ 1.55
PSEN1-207ENST00000553599 SMC4Q9NTJ3 1288 aa24.75■■□□□ 1.55
PSEN1-207ENST00000553599 COL15A1P39059 1388 aa24.75■■□□□ 1.55
PSEN1-207ENST00000553599 QSER1Q2KHR3 1735 aa24.75■■□□□ 1.55
PSEN1-207ENST00000553599 TRAPPC3LQ5T215 181 aa24.74■■□□□ 1.55
PSEN1-207ENST00000553599 MRPL50Q8N5N7 158 aaKnown RBP24.74■■□□□ 1.55
PSEN1-207ENST00000553599 ANO8Q9HCE9 1232 aaPredicted RBP24.74■■□□□ 1.55
PSEN1-207ENST00000553599 RCAN3Q9UKA8 241 aa24.74■■□□□ 1.55
PSEN1-207ENST00000553599 KIF16BQ96L93 1317 aa24.72■■□□□ 1.55
PSEN1-207ENST00000553599 TCERG1O14776 1098 aaKnown RBP24.72■■□□□ 1.55
PSEN1-207ENST00000553599 PIP4K2AP48426 406 aaPredicted RBP24.72■■□□□ 1.55
PSEN1-207ENST00000553599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.71■■□□□ 1.55
PSEN1-207ENST00000553599 RGL2O15211 777 aa24.71■■□□□ 1.55
PSEN1-207ENST00000553599 DDX58O95786 925 aaKnown RBP24.71■■□□□ 1.55
PSEN1-207ENST00000553599 ANXA1P04083 346 aa24.71■■□□□ 1.55
PSEN1-207ENST00000553599 ZNF330Q9Y3S2 320 aaPredicted RBP24.71■■□□□ 1.55
PSEN1-207ENST00000553599 PTPRCP08575 1304 aa24.7■■□□□ 1.54
PSEN1-207ENST00000553599 FLIIQ13045 1269 aa24.7■■□□□ 1.54
PSEN1-207ENST00000553599 COPS6Q7L5N1 327 aa24.7■■□□□ 1.54
PSEN1-207ENST00000553599 XAGE3Q8WTP9 111 aa24.7■■□□□ 1.54
PSEN1-207ENST00000553599 KIF6Q6ZMV9 814 aa24.69■■□□□ 1.54
PSEN1-207ENST00000553599 ARHGEF1Q92888 912 aaKnown RBP24.69■■□□□ 1.54
PSEN1-207ENST00000553599 PHAXQ9H814 394 aaKnown RBP24.69■■□□□ 1.54
PSEN1-207ENST00000553599 TUBGCP6Q96RT7 1819 aa24.68■■□□□ 1.54
PSEN1-207ENST00000553599 ERVV-1B6SEH8 477 aa24.68■■□□□ 1.54
PSEN1-207ENST00000553599 RFC4P35249 363 aa24.68■■□□□ 1.54
PSEN1-207ENST00000553599 DZIP3Q86Y13 1208 aaKnown RBP24.68■■□□□ 1.54
PSEN1-207ENST00000553599 ARHGAP45Q92619 1136 aa24.68■■□□□ 1.54
PSEN1-207ENST00000553599 BCL2L13Q9BXK5 485 aa24.68■■□□□ 1.54
PSEN1-207ENST00000553599 NARFQ9UHQ1 456 aa24.68■■□□□ 1.54
PSEN1-207ENST00000553599 PNPLA7Q6ZV29 1317 aa24.67■■□□□ 1.54
PSEN1-207ENST00000553599 IPO8O15397 1037 aaKnown RBP24.67■■□□□ 1.54
PSEN1-207ENST00000553599 PHF14O94880 888 aa24.67■■□□□ 1.54
PSEN1-207ENST00000553599 CENPBP07199 599 aaPredicted RBP24.67■■□□□ 1.54
PSEN1-207ENST00000553599 AMIGO3Q86WK7 504 aa24.67■■□□□ 1.54
PSEN1-207ENST00000553599 ZPR1O75312 459 aa24.66■■□□□ 1.54
PSEN1-207ENST00000553599 BCAR3O75815 825 aa24.66■■□□□ 1.54
PSEN1-207ENST00000553599 AIMP1Q12904 312 aaKnown RBP24.66■■□□□ 1.54
PSEN1-207ENST00000553599 ANKRD13DQ6ZTN6 518 aa24.66■■□□□ 1.54
PSEN1-207ENST00000553599 G2E3Q7L622 706 aa24.66■■□□□ 1.54
PSEN1-207ENST00000553599 PLBD2Q8NHP8 589 aa24.66■■□□□ 1.54
PSEN1-207ENST00000553599 MAP3K15Q6ZN16 1313 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms