RNA–Protein interactions for RNA: ENST00000553496.1

LINC01146-201, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3

Gene LINC01146, Length 425 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-201ENST00000553496 DISP3Q9P2K9 1392 aa11.31□□□□□ -0.6
LINC01146-201ENST00000553496 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
LINC01146-201ENST00000553496 ZBTB24O43167 697 aaPredicted RBP11.31□□□□□ -0.6
LINC01146-201ENST00000553496 SAFB2Q14151 953 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC01146-201ENST00000553496 CYP4X1Q8N118 509 aa11.31□□□□□ -0.6
LINC01146-201ENST00000553496 MED1Q15648 1581 aaPredicted RBP11.31□□□□□ -0.6
LINC01146-201ENST00000553496 FMN2Q9NZ56 1722 aa11.31□□□□□ -0.6
LINC01146-201ENST00000553496 PXDNQ92626 1479 aa11.31□□□□□ -0.6
LINC01146-201ENST00000553496 SBNO1A3KN83 1393 aa11.3□□□□□ -0.6
LINC01146-201ENST00000553496 PNPLA6Q8IY17 1366 aa11.3□□□□□ -0.6
LINC01146-201ENST00000553496 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
LINC01146-201ENST00000553496 FOXO3O43524 673 aa11.3□□□□□ -0.6
LINC01146-201ENST00000553496 PSME1Q06323 249 aa11.3□□□□□ -0.6
LINC01146-201ENST00000553496 TRIM32Q13049 653 aa11.3□□□□□ -0.6
LINC01146-201ENST00000553496 PUS7Q96PZ0 661 aaKnown RBP11.3□□□□□ -0.6
LINC01146-201ENST00000553496 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
LINC01146-201ENST00000553496 TRPM1Q7Z4N2 1603 aa11.3□□□□□ -0.6
LINC01146-201ENST00000553496 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
LINC01146-201ENST00000553496 WNT7AO00755 349 aa11.29□□□□□ -0.6
LINC01146-201ENST00000553496 GUCA2AQ02747 115 aa11.29□□□□□ -0.6
LINC01146-201ENST00000553496 CDK19Q9BWU1 502 aa11.29□□□□□ -0.6
LINC01146-201ENST00000553496 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
LINC01146-201ENST00000553496 KIF1AQ12756 1690 aa11.29□□□□□ -0.6
LINC01146-201ENST00000553496 SHPRHQ149N8 1683 aa11.29□□□□□ -0.6
LINC01146-201ENST00000553496 PRR36Q9H6K5 1346 aa11.29□□□□□ -0.6
LINC01146-201ENST00000553496 ARHGEF28Q8N1W1 1705 aaKnown RBP11.29□□□□□ -0.6
LINC01146-201ENST00000553496 POLR3AO14802 1390 aaPredicted RBP11.28□□□□□ -0.6
LINC01146-201ENST00000553496 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
LINC01146-201ENST00000553496 HIRIP3Q9BW71 556 aaPredicted RBP11.28□□□□□ -0.6
LINC01146-201ENST00000553496 CARD11Q9BXL7 1154 aa11.28□□□□□ -0.6
LINC01146-201ENST00000553496 SPATA31A3Q5VYP0 1347 aa11.28□□□□□ -0.6
LINC01146-201ENST00000553496 EVC2Q86UK5 1308 aa11.28□□□□□ -0.6
LINC01146-201ENST00000553496 ATP7BP35670 1465 aa11.27□□□□□ -0.6
LINC01146-201ENST00000553496 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC01146-201ENST00000553496 KRT28Q7Z3Y7 464 aa11.27□□□□□ -0.61
LINC01146-201ENST00000553496 DDX17Q92841 729 aaKnown RBP11.27□□□□□ -0.61
LINC01146-201ENST00000553496 ARHGEF10O15013 1369 aa11.27□□□□□ -0.61
LINC01146-201ENST00000553496 CLCN1P35523 988 aa11.26□□□□□ -0.61
LINC01146-201ENST00000553496 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
LINC01146-201ENST00000553496 REPIN1Q9BWE0 567 aaKnown RBP11.26□□□□□ -0.61
LINC01146-201ENST00000553496 SMPD1P17405 629 aa11.25□□□□□ -0.61
LINC01146-201ENST00000553496 CTC1Q2NKJ3 1217 aa11.25□□□□□ -0.61
LINC01146-201ENST00000553496 RGS17Q9UGC6 210 aaPredicted RBP11.25□□□□□ -0.61
LINC01146-201ENST00000553496 TNS3Q68CZ2 1445 aa11.25□□□□□ -0.61
LINC01146-201ENST00000553496 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
LINC01146-201ENST00000553496 COL22A1Q8NFW1 1626 aaPredicted RBP11.24□□□□□ -0.61
LINC01146-201ENST00000553496 TTC24A2A3L6 582 aaPredicted RBP11.24□□□□□ -0.61
LINC01146-201ENST00000553496 AXIN1O15169 862 aa11.24□□□□□ -0.61
LINC01146-201ENST00000553496 ZNF772Q68DY9 489 aaPredicted RBP11.24□□□□□ -0.61
LINC01146-201ENST00000553496 SYMPKQ92797 1274 aaKnown RBP11.24□□□□□ -0.61
LINC01146-201ENST00000553496 MRGPRX2Q96LB1 330 aa11.24□□□□□ -0.61
LINC01146-201ENST00000553496 ATAD2Q6PL18 1390 aa11.24□□□□□ -0.61
LINC01146-201ENST00000553496 LRP6O75581 1613 aa11.24□□□□□ -0.61
LINC01146-201ENST00000553496 LCE2AQ5TA79 106 aaPredicted RBP11.23□□□□□ -0.61
LINC01146-201ENST00000553496 FNBP4Q8N3X1 1017 aaPredicted RBP11.23□□□□□ -0.61
LINC01146-201ENST00000553496 NGDNQ8NEJ9 315 aaKnown RBP11.23□□□□□ -0.61
LINC01146-201ENST00000553496 SNIP1Q8TAD8 396 aaKnown RBP11.23□□□□□ -0.61
LINC01146-201ENST00000553496 CCER1Q8TC90 406 aaPredicted RBP11.23□□□□□ -0.61
LINC01146-201ENST00000553496 SRPK2P78362 688 aaKnown RBP11.22□□□□□ -0.61
LINC01146-201ENST00000553496 SKOR1P84550 965 aa11.22□□□□□ -0.61
LINC01146-201ENST00000553496 TESK2Q96S53 571 aa11.22□□□□□ -0.61
LINC01146-201ENST00000553496 GMPR2Q9P2T1 348 aaKnown RBP11.22□□□□□ -0.61
LINC01146-201ENST00000553496 NINLQ9Y2I6 1382 aa11.21□□□□□ -0.61
LINC01146-201ENST00000553496 ACEP12821 1306 aa11.21□□□□□ -0.61
LINC01146-201ENST00000553496 J3QL48 77 aa11.21□□□□□ -0.61
LINC01146-201ENST00000553496 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.61
LINC01146-201ENST00000553496 PMFBP1Q8TBY8 1022 aa11.21□□□□□ -0.61
LINC01146-201ENST00000553496 JUNDP17535 347 aa11.2□□□□□ -0.62
LINC01146-201ENST00000553496 XPCQ01831 940 aaPredicted RBP11.2□□□□□ -0.62
LINC01146-201ENST00000553496 MEX3CQ5U5Q3 659 aaKnown RBP11.2□□□□□ -0.62
LINC01146-201ENST00000553496 PCDHGC3Q9UN70 934 aa11.2□□□□□ -0.62
LINC01146-201ENST00000553496 PPIP5K1Q6PFW1 1433 aa11.19□□□□□ -0.62
LINC01146-201ENST00000553496 CPSF1Q10570 1443 aaKnown RBP11.18□□□□□ -0.62
LINC01146-201ENST00000553496 SSH2Q76I76 1423 aa11.18□□□□□ -0.62
LINC01146-201ENST00000553496 TOPAZ1Q8N9V7 1692 aa11.18□□□□□ -0.62
LINC01146-201ENST00000553496 ST20-MTHFSA0A0A6YYL1 179 aa11.18□□□□□ -0.62
LINC01146-201ENST00000553496 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
LINC01146-201ENST00000553496 NUTM2EB1AL46 878 aaPredicted RBP11.18□□□□□ -0.62
LINC01146-201ENST00000553496 CDCA8Q53HL2 280 aa11.18□□□□□ -0.62
LINC01146-201ENST00000553496 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
LINC01146-201ENST00000553496 ILDR2Q71H61 639 aa11.18□□□□□ -0.62
LINC01146-201ENST00000553496 RETREG3Q86VR2 466 aa11.18□□□□□ -0.62
LINC01146-201ENST00000553496 NUTM1Q86Y26 1132 aa11.18□□□□□ -0.62
LINC01146-201ENST00000553496 NUTM2AQ8IVF1 878 aaPredicted RBP11.18□□□□□ -0.62
LINC01146-201ENST00000553496 CABP1Q9NZU7 370 aa11.18□□□□□ -0.62
LINC01146-201ENST00000553496 ITSN1Q15811 1721 aa11.18□□□□□ -0.62
LINC01146-201ENST00000553496 QRICH2Q9H0J4 1663 aa11.17□□□□□ -0.62
LINC01146-201ENST00000553496 USP47Q96K76 1375 aa11.17□□□□□ -0.62
LINC01146-201ENST00000553496 WNT7BP56706 349 aa11.17□□□□□ -0.62
LINC01146-201ENST00000553496 POTEAQ6S8J7 498 aa11.17□□□□□ -0.62
LINC01146-201ENST00000553496 TREML4Q6UXN2 200 aa11.17□□□□□ -0.62
LINC01146-201ENST00000553496 NGLY1Q96IV0 654 aa11.17□□□□□ -0.62
LINC01146-201ENST00000553496 CDK12Q9NYV4 1490 aaPredicted RBP11.17□□□□□ -0.62
LINC01146-201ENST00000553496 USP6P35125 1406 aa11.17□□□□□ -0.62
LINC01146-201ENST00000553496 USP19O94966 1318 aa11.16□□□□□ -0.62
LINC01146-201ENST00000553496 AFF2P51816 1311 aa11.16□□□□□ -0.62
LINC01146-201ENST00000553496 SOCS7O14512 581 aa11.16□□□□□ -0.62
LINC01146-201ENST00000553496 SSTR3P32745 418 aaPredicted RBP11.16□□□□□ -0.62
LINC01146-201ENST00000553496 PTCRAQ6ISU1 281 aaPredicted RBP11.16□□□□□ -0.62
LINC01146-201ENST00000553496 BARGINQ6ZT62 677 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms