RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 KCNQ3O43525 872 aa10.89□□□□□ -0.67
PCNX1-204ENST00000553428 GYS1P13807 737 aa10.89□□□□□ -0.67
PCNX1-204ENST00000553428 ZBTB1Q9Y2K1 713 aa10.89□□□□□ -0.67
PCNX1-204ENST00000553428 SIPA1L3O60292 1781 aaPredicted RBP10.89□□□□□ -0.67
PCNX1-204ENST00000553428 COL15A1P39059 1388 aa10.89□□□□□ -0.67
PCNX1-204ENST00000553428 ZPR1O75312 459 aa10.88□□□□□ -0.67
PCNX1-204ENST00000553428 IL6STP40189 918 aaPredicted RBP10.88□□□□□ -0.67
PCNX1-204ENST00000553428 NPM2Q86SE8 214 aaKnown RBP10.88□□□□□ -0.67
PCNX1-204ENST00000553428 NARFQ9UHQ1 456 aa10.88□□□□□ -0.67
PCNX1-204ENST00000553428 MMP10P09238 476 aa10.87□□□□□ -0.67
PCNX1-204ENST00000553428 EIF5P55010 431 aaKnown RBP10.87□□□□□ -0.67
PCNX1-204ENST00000553428 CCDC146Q8IYE0 955 aa10.87□□□□□ -0.67
PCNX1-204ENST00000553428 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
PCNX1-204ENST00000553428 VIRMAQ69YN4 1812 aaKnown RBP10.86□□□□□ -0.67
PCNX1-204ENST00000553428 CANXP27824 592 aaKnown RBP10.86□□□□□ -0.67
PCNX1-204ENST00000553428 EIF4A1P60842 406 aaKnown RBP10.86□□□□□ -0.67
PCNX1-204ENST00000553428 THUMPD2Q9BTF0 503 aaKnown RBP10.86□□□□□ -0.67
PCNX1-204ENST00000553428 USP16Q9Y5T5 823 aa10.86□□□□□ -0.67
PCNX1-204ENST00000553428 MYH14Q7Z406 1995 aaKnown RBP10.86□□□□□ -0.67
PCNX1-204ENST00000553428 RGL2O15211 777 aa10.85□□□□□ -0.67
PCNX1-204ENST00000553428 GIGYF1O75420 1035 aaPredicted RBP10.85□□□□□ -0.67
PCNX1-204ENST00000553428 CALD1Q05682 793 aaKnown RBP10.85□□□□□ -0.67
PCNX1-204ENST00000553428 NEUROD2Q15784 382 aa10.85□□□□□ -0.67
PCNX1-204ENST00000553428 USPL1Q5W0Q7 1092 aa10.85□□□□□ -0.67
PCNX1-204ENST00000553428 MRS2Q9HD23 443 aa10.85□□□□□ -0.67
PCNX1-204ENST00000553428 SRP68Q9UHB9 627 aaKnown RBP10.85□□□□□ -0.67
PCNX1-204ENST00000553428 TSPYL4Q9UJ04 414 aa10.85□□□□□ -0.67
PCNX1-204ENST00000553428 PARP3Q9Y6F1 533 aa10.85□□□□□ -0.67
PCNX1-204ENST00000553428 A1BGP04217 495 aa10.84□□□□□ -0.67
PCNX1-204ENST00000553428 TM4SF1P30408 202 aa10.84□□□□□ -0.67
PCNX1-204ENST00000553428 FKBP8Q14318 412 aa10.84□□□□□ -0.67
PCNX1-204ENST00000553428 NCBP3Q53F19 620 aaKnown RBP10.84□□□□□ -0.67
PCNX1-204ENST00000553428 MIS18AQ9NYP9 233 aa10.84□□□□□ -0.67
PCNX1-204ENST00000553428 TRIM35Q9UPQ4 493 aa10.84□□□□□ -0.67
PCNX1-204ENST00000553428 RRP7AQ9Y3A4 280 aaKnown RBP10.84□□□□□ -0.67
PCNX1-204ENST00000553428 ERBB4Q15303 1308 aa10.84□□□□□ -0.67
PCNX1-204ENST00000553428 CHL1O00533 1208 aa10.83□□□□□ -0.68
PCNX1-204ENST00000553428 APAF1O14727 1248 aa10.83□□□□□ -0.68
PCNX1-204ENST00000553428 TGFB2P61812 414 aa10.83□□□□□ -0.68
PCNX1-204ENST00000553428 CCDC184Q52MB2 194 aa10.83□□□□□ -0.68
PCNX1-204ENST00000553428 NLGN2Q8NFZ4 835 aa10.83□□□□□ -0.68
PCNX1-204ENST00000553428 DLG5Q8TDM6 1919 aa10.82□□□□□ -0.68
PCNX1-204ENST00000553428 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
PCNX1-204ENST00000553428 POLRMTO00411 1230 aaKnown RBP10.82□□□□□ -0.68
PCNX1-204ENST00000553428 GPR162Q16538 588 aa10.82□□□□□ -0.68
PCNX1-204ENST00000553428 CLEC4GQ6UXB4 293 aa10.82□□□□□ -0.68
PCNX1-204ENST00000553428 DZIP3Q86Y13 1208 aaKnown RBP10.82□□□□□ -0.68
PCNX1-204ENST00000553428 CFAP44Q96MT7 982 aa10.82□□□□□ -0.68
PCNX1-204ENST00000553428 C10orf71Q711Q0 1435 aa10.82□□□□□ -0.68
PCNX1-204ENST00000553428 C4AP0C0L4 1744 aa10.81□□□□□ -0.68
PCNX1-204ENST00000553428 GRIN3BO60391 1043 aa10.81□□□□□ -0.68
PCNX1-204ENST00000553428 CAMTA2O94983 1202 aa10.81□□□□□ -0.68
PCNX1-204ENST00000553428 HOXB7P09629 217 aa10.81□□□□□ -0.68
PCNX1-204ENST00000553428 DDR1Q08345 913 aa10.81□□□□□ -0.68
PCNX1-204ENST00000553428 NFIXQ14938 502 aa10.81□□□□□ -0.68
PCNX1-204ENST00000553428 CCDC27Q2M243 656 aa10.81□□□□□ -0.68
PCNX1-204ENST00000553428 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
PCNX1-204ENST00000553428 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
PCNX1-204ENST00000553428 ZNF652Q9Y2D9 606 aa10.81□□□□□ -0.68
PCNX1-204ENST00000553428 ZNF330Q9Y3S2 320 aaPredicted RBP10.81□□□□□ -0.68
PCNX1-204ENST00000553428 KDM3BQ7LBC6 1761 aa10.8□□□□□ -0.68
PCNX1-204ENST00000553428 NBPF26B4DH59 902 aa10.8□□□□□ -0.68
PCNX1-204ENST00000553428 GNAI1P63096 354 aa10.8□□□□□ -0.68
PCNX1-204ENST00000553428 NBPF10Q6P3W6 841 aaKnown RBP10.8□□□□□ -0.68
PCNX1-204ENST00000553428 NGEFQ8N5V2 710 aa10.8□□□□□ -0.68
PCNX1-204ENST00000553428 NBPF15Q8N660 670 aa10.8□□□□□ -0.68
PCNX1-204ENST00000553428 IFT57Q9NWB7 429 aa10.8□□□□□ -0.68
PCNX1-204ENST00000553428 SERPINB2P05120 415 aa10.79□□□□□ -0.68
PCNX1-204ENST00000553428 ZNF853P0CG23 659 aa10.79□□□□□ -0.68
PCNX1-204ENST00000553428 CARMIL3Q8ND23 1372 aa10.78□□□□□ -0.68
PCNX1-204ENST00000553428 ERVV-1B6SEH8 477 aa10.78□□□□□ -0.68
PCNX1-204ENST00000553428 PIP4K2AP48426 406 aaPredicted RBP10.78□□□□□ -0.68
PCNX1-204ENST00000553428 TBC1D9BQ66K14 1250 aa10.78□□□□□ -0.68
PCNX1-204ENST00000553428 SETDB2Q96T68 719 aa10.78□□□□□ -0.68
PCNX1-204ENST00000553428 CHMP4AQ9BY43 222 aa10.78□□□□□ -0.68
PCNX1-204ENST00000553428 PDZRN3Q9UPQ7 1066 aa10.78□□□□□ -0.68
PCNX1-204ENST00000553428 LAS1LQ9Y4W2 734 aaKnown RBP10.78□□□□□ -0.68
PCNX1-204ENST00000553428 PXDNLA1KZ92 1463 aa10.78□□□□□ -0.68
PCNX1-204ENST00000553428 YBX3P16989 372 aaKnown RBP eCLIP10.77□□□□□ -0.69
PCNX1-204ENST00000553428 KIF6Q6ZMV9 814 aa10.77□□□□□ -0.69
PCNX1-204ENST00000553428 BICDL1Q6ZP65 573 aa10.77□□□□□ -0.69
PCNX1-204ENST00000553428 PELP1Q8IZL8 1130 aaKnown RBP10.77□□□□□ -0.69
PCNX1-204ENST00000553428 MBIPQ9NS73 344 aa10.77□□□□□ -0.69
PCNX1-204ENST00000553428 LAMB4A4D0S4 1761 aa10.77□□□□□ -0.69
PCNX1-204ENST00000553428 SCN7AQ01118 1682 aa10.76□□□□□ -0.69
PCNX1-204ENST00000553428 DPEP1P16444 411 aa10.76□□□□□ -0.69
PCNX1-204ENST00000553428 EIF2S2P20042 333 aaKnown RBP10.76□□□□□ -0.69
PCNX1-204ENST00000553428 YY1P25490 414 aa10.76□□□□□ -0.69
PCNX1-204ENST00000553428 IL16Q14005 1332 aa10.76□□□□□ -0.69
PCNX1-204ENST00000553428 MAP3K15Q6ZN16 1313 aa10.76□□□□□ -0.69
PCNX1-204ENST00000553428 SRCAPQ6ZRS2 3230 aa10.75□□□□□ -0.69
PCNX1-204ENST00000553428 KIF13BQ9NQT8 1826 aa10.75□□□□□ -0.69
PCNX1-204ENST00000553428 A0A0G2JLW4 131 aa10.75□□□□□ -0.69
PCNX1-204ENST00000553428 MYL6BP14649 208 aa10.75□□□□□ -0.69
PCNX1-204ENST00000553428 PDIA6Q15084 440 aa10.75□□□□□ -0.69
PCNX1-204ENST00000553428 DUSP27Q5VZP5 1158 aa10.75□□□□□ -0.69
PCNX1-204ENST00000553428 LRP10Q7Z4F1 713 aa10.75□□□□□ -0.69
PCNX1-204ENST00000553428 WWC1Q8IX03 1113 aa10.75□□□□□ -0.69
PCNX1-204ENST00000553428 BRIP1Q9BX63 1249 aa10.75□□□□□ -0.69
PCNX1-204ENST00000553428 DDX21Q9NR30 783 aaKnown RBP eCLIP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms