RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 FRMPD1Q5SYB0 1578 aa13.58□□□□□ -0.24
NRDE2-202ENST00000553409 CLTCQ00610 1675 aaKnown RBP13.58□□□□□ -0.24
NRDE2-202ENST00000553409 CPA1P15085 419 aa13.58□□□□□ -0.24
NRDE2-202ENST00000553409 LUZP1Q86V48 1076 aa13.58□□□□□ -0.24
NRDE2-202ENST00000553409 CHMP3Q9Y3E7 222 aa13.58□□□□□ -0.24
NRDE2-202ENST00000553409 HECW2Q9P2P5 1572 aa13.57□□□□□ -0.24
NRDE2-202ENST00000553409 LARGE1O95461 756 aa13.57□□□□□ -0.24
NRDE2-202ENST00000553409 IL1RAPL2Q9NP60 686 aa13.57□□□□□ -0.24
NRDE2-202ENST00000553409 NRBP1Q9UHY1 535 aa13.57□□□□□ -0.24
NRDE2-202ENST00000553409 MTMR6Q9Y217 621 aa13.57□□□□□ -0.24
NRDE2-202ENST00000553409 FAM200AQ8TCP9 573 aa13.57□□□□□ -0.24
NRDE2-202ENST00000553409 BCL11BQ9C0K0 894 aaPredicted RBP13.57□□□□□ -0.24
NRDE2-202ENST00000553409 CAMK4Q16566 473 aa13.57□□□□□ -0.24
NRDE2-202ENST00000553409 DDX41Q9UJV9 622 aaKnown RBP13.57□□□□□ -0.24
NRDE2-202ENST00000553409 SMTNL1A8MU46 457 aa13.56□□□□□ -0.24
NRDE2-202ENST00000553409 TNNT1P13805 278 aa13.56□□□□□ -0.24
NRDE2-202ENST00000553409 ATP8B2P98198 1209 aa13.56□□□□□ -0.24
NRDE2-202ENST00000553409 RAD50Q92878 1312 aa13.56□□□□□ -0.24
NRDE2-202ENST00000553409 GJB2P29033 226 aa13.56□□□□□ -0.24
NRDE2-202ENST00000553409 NUTM1Q86Y26 1132 aa13.56□□□□□ -0.24
NRDE2-202ENST00000553409 CCDC83Q8IWF9 413 aa13.56□□□□□ -0.24
NRDE2-202ENST00000553409 MRVI1Q9Y6F6 885 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 SLFN14P0C7P3 912 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 SYCP1Q15431 976 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 DRC7Q8IY82 874 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 COG3Q96JB2 828 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 TMEM51Q9NW97 253 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 ZBTB22O15209 634 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 SGSM2O43147 1006 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 EPB41L2O43491 1005 aaKnown RBP13.55□□□□□ -0.24
NRDE2-202ENST00000553409 TYRO3Q06418 890 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 GABPB1Q06547 395 aaPredicted RBP13.55□□□□□ -0.24
NRDE2-202ENST00000553409 TAF3Q5VWG9 929 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
NRDE2-202ENST00000553409 VPS37CA5D8V6 355 aaPredicted RBP13.54□□□□□ -0.24
NRDE2-202ENST00000553409 LIG1P18858 919 aa13.54□□□□□ -0.24
NRDE2-202ENST00000553409 MAP3K11Q16584 847 aa13.54□□□□□ -0.24
NRDE2-202ENST00000553409 LSG1Q9H089 658 aaKnown RBP13.54□□□□□ -0.24
NRDE2-202ENST00000553409 ATP7BP35670 1465 aa13.54□□□□□ -0.24
NRDE2-202ENST00000553409 EIF4A2Q14240 407 aaKnown RBP13.54□□□□□ -0.24
NRDE2-202ENST00000553409 ZSCAN25Q6NSZ9 544 aa13.54□□□□□ -0.24
NRDE2-202ENST00000553409 TTC6Q86TZ1 520 aa13.54□□□□□ -0.24
NRDE2-202ENST00000553409 CKAP2LQ8IYA6 745 aa13.54□□□□□ -0.24
NRDE2-202ENST00000553409 CCDC112Q8NEF3 446 aa13.54□□□□□ -0.24
NRDE2-202ENST00000553409 SLC52A1Q9NWF4 448 aa13.54□□□□□ -0.24
NRDE2-202ENST00000553409 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
NRDE2-202ENST00000553409 CASTP20810 708 aaKnown RBP13.53□□□□□ -0.24
NRDE2-202ENST00000553409 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
NRDE2-202ENST00000553409 LRRFIP2Q9Y608 721 aaKnown RBP13.53□□□□□ -0.24
NRDE2-202ENST00000553409 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
NRDE2-202ENST00000553409 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
NRDE2-202ENST00000553409 TRIM5Q9C035 493 aa13.53□□□□□ -0.24
NRDE2-202ENST00000553409 NUP62CLQ9H1M0 184 aa13.53□□□□□ -0.24
NRDE2-202ENST00000553409 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
NRDE2-202ENST00000553409 SPG7Q9UQ90 795 aa13.53□□□□□ -0.24
NRDE2-202ENST00000553409 MORC2Q9Y6X9 1032 aaPredicted RBP13.53□□□□□ -0.24
NRDE2-202ENST00000553409 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
NRDE2-202ENST00000553409 GNAI3P08754 354 aa13.52□□□□□ -0.24
NRDE2-202ENST00000553409 KIF18AQ8NI77 898 aa13.52□□□□□ -0.24
NRDE2-202ENST00000553409 EDC4Q6P2E9 1401 aaKnown RBP13.52□□□□□ -0.24
NRDE2-202ENST00000553409 ANO6Q4KMQ2 910 aa13.52□□□□□ -0.25
NRDE2-202ENST00000553409 TSPYL4Q9UJ04 414 aa13.52□□□□□ -0.25
NRDE2-202ENST00000553409 PAXBP1Q9Y5B6 917 aa13.52□□□□□ -0.25
NRDE2-202ENST00000553409 ZNF75DP51815 510 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 TPD52L1Q16890 204 aaPredicted RBP13.51□□□□□ -0.25
NRDE2-202ENST00000553409 CWC27Q6UX04 472 aaKnown RBP13.51□□□□□ -0.25
NRDE2-202ENST00000553409 FERMT3Q86UX7 667 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 CACTINQ8WUQ7 758 aaKnown RBP13.51□□□□□ -0.25
NRDE2-202ENST00000553409 ZNF592Q92610 1267 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 CRB1P82279 1406 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 ST3GAL1Q11201 340 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 PI4K2BQ8TCG2 481 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 AOX1Q06278 1338 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 FOXO3O43524 673 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 TERF2Q15554 542 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 PLA2G4DQ86XP0 818 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
NRDE2-202ENST00000553409 ADCK5Q3MIX3 580 aa13.5□□□□□ -0.25
NRDE2-202ENST00000553409 NECAB1Q8N987 351 aa13.5□□□□□ -0.25
NRDE2-202ENST00000553409 DDX54Q8TDD1 881 aaKnown RBP13.5□□□□□ -0.25
NRDE2-202ENST00000553409 FLIIQ13045 1269 aa13.5□□□□□ -0.25
NRDE2-202ENST00000553409 CCDC144BQ3MJ40 725 aa13.5□□□□□ -0.25
NRDE2-202ENST00000553409 CCDC144CPQ8IYA2 1237 aa13.5□□□□□ -0.25
NRDE2-202ENST00000553409 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
NRDE2-202ENST00000553409 TNMDQ9H2S6 317 aa13.5□□□□□ -0.25
NRDE2-202ENST00000553409 MLH3Q9UHC1 1453 aa13.5□□□□□ -0.25
NRDE2-202ENST00000553409 KMT5BQ4FZB7 885 aa13.49□□□□□ -0.25
NRDE2-202ENST00000553409 PDRG1Q9NUG6 133 aa13.49□□□□□ -0.25
NRDE2-202ENST00000553409 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.49□□□□□ -0.25
NRDE2-202ENST00000553409 V9GYY5 206 aaPredicted RBP13.49□□□□□ -0.25
NRDE2-202ENST00000553409 KRT85P78386 507 aa13.49□□□□□ -0.25
NRDE2-202ENST00000553409 ME3Q16798 604 aa13.49□□□□□ -0.25
NRDE2-202ENST00000553409 STK31Q9BXU1 1019 aa13.49□□□□□ -0.25
NRDE2-202ENST00000553409 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
NRDE2-202ENST00000553409 CEP135Q66GS9 1140 aa13.49□□□□□ -0.25
NRDE2-202ENST00000553409 JAKMIP1Q96N16 626 aaKnown RBP13.49□□□□□ -0.25
NRDE2-202ENST00000553409 SURF6O75683 361 aaKnown RBP13.48□□□□□ -0.25
NRDE2-202ENST00000553409 CDC37L1Q7L3B6 337 aa13.48□□□□□ -0.25
NRDE2-202ENST00000553409 KRT222Q8N1A0 295 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms