RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 TBC1D9Q6ZT07 1266 aa9.6□□□□□ -0.87
CEP290-206ENST00000552770 DCDC2BA2VCK2 349 aa9.58□□□□□ -0.88
CEP290-206ENST00000552770 TMEM229AB2RXF0 380 aa9.58□□□□□ -0.88
CEP290-206ENST00000552770 CD33P20138 364 aa9.58□□□□□ -0.88
CEP290-206ENST00000552770 MCM6Q14566 821 aa9.58□□□□□ -0.88
CEP290-206ENST00000552770 GDPD2Q9HCC8 539 aa9.58□□□□□ -0.88
CEP290-206ENST00000552770 SERTAD1Q9UHV2 236 aa9.58□□□□□ -0.88
CEP290-206ENST00000552770 C1QTNF9BB2RNN3 333 aa9.57□□□□□ -0.88
CEP290-206ENST00000552770 ARAFP10398 606 aa9.57□□□□□ -0.88
CEP290-206ENST00000552770 CHRNA4P43681 627 aa9.57□□□□□ -0.88
CEP290-206ENST00000552770 FCHSD1Q86WN1 690 aa9.57□□□□□ -0.88
CEP290-206ENST00000552770 AIDAQ96BJ3 306 aa9.57□□□□□ -0.88
CEP290-206ENST00000552770 IQSEC3Q9UPP2 1182 aaPredicted RBP9.57□□□□□ -0.88
CEP290-206ENST00000552770 PCDHGC4Q9Y5F7 938 aa9.57□□□□□ -0.88
CEP290-206ENST00000552770 ATXN7O15265 892 aaPredicted RBP9.56□□□□□ -0.88
CEP290-206ENST00000552770 MAPTP10636 758 aaKnown RBP9.56□□□□□ -0.88
CEP290-206ENST00000552770 SMTNP53814 917 aa9.56□□□□□ -0.88
CEP290-206ENST00000552770 TNP2Q05952 138 aa9.56□□□□□ -0.88
CEP290-206ENST00000552770 CD163Q86VB7 1156 aa9.56□□□□□ -0.88
CEP290-206ENST00000552770 PLPP7Q8NBV4 271 aa9.56□□□□□ -0.88
CEP290-206ENST00000552770 A0A1W2PNR3 127 aa9.55□□□□□ -0.88
CEP290-206ENST00000552770 PIK3CDO00329 1044 aa9.55□□□□□ -0.88
CEP290-206ENST00000552770 GNB5O14775 395 aa9.55□□□□□ -0.88
CEP290-206ENST00000552770 ITGB7P26010 798 aa9.55□□□□□ -0.88
CEP290-206ENST00000552770 CHSY3Q70JA7 882 aa9.54□□□□□ -0.88
CEP290-206ENST00000552770 NLRP8Q86W28 1048 aa9.54□□□□□ -0.88
CEP290-206ENST00000552770 NIFKQ9BYG3 293 aaKnown RBP9.54□□□□□ -0.88
CEP290-206ENST00000552770 STRN4Q9NRL3 753 aa9.54□□□□□ -0.88
CEP290-206ENST00000552770 ABL2P42684 1182 aa9.53□□□□□ -0.88
CEP290-206ENST00000552770 FIGNL1Q6PIW4 674 aa9.53□□□□□ -0.88
CEP290-206ENST00000552770 ALYREFQ86V81 257 aaKnown RBP9.53□□□□□ -0.88
CEP290-206ENST00000552770 ZIC5Q96T25 663 aa9.53□□□□□ -0.88
CEP290-206ENST00000552770 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
CEP290-206ENST00000552770 PARP3Q9Y6F1 533 aa9.53□□□□□ -0.88
CEP290-206ENST00000552770 MTFR1Q15390 333 aa9.52□□□□□ -0.89
CEP290-206ENST00000552770 Q8N3U1 123 aa9.52□□□□□ -0.89
CEP290-206ENST00000552770 C1orf216Q8TAB5 229 aa9.52□□□□□ -0.89
CEP290-206ENST00000552770 KHNYNO15037 678 aaKnown RBP9.51□□□□□ -0.89
CEP290-206ENST00000552770 RAD21O60216 631 aa9.51□□□□□ -0.89
CEP290-206ENST00000552770 PCBP4P57723 403 aaKnown RBP9.51□□□□□ -0.89
CEP290-206ENST00000552770 ARSJQ5FYB0 599 aaPredicted RBP9.51□□□□□ -0.89
CEP290-206ENST00000552770 SIRT1Q96EB6 747 aa9.51□□□□□ -0.89
CEP290-206ENST00000552770 TRIM11Q96F44 468 aa9.51□□□□□ -0.89
CEP290-206ENST00000552770 SLC4A9Q96Q91 983 aa9.51□□□□□ -0.89
CEP290-206ENST00000552770 PCDHGA11Q9Y5H2 935 aa9.51□□□□□ -0.89
CEP290-206ENST00000552770 A6NJY4 79 aa9.5□□□□□ -0.89
CEP290-206ENST00000552770 UBTFP17480 764 aaKnown RBP9.5□□□□□ -0.89
CEP290-206ENST00000552770 ADH6P28332 368 aa9.5□□□□□ -0.89
CEP290-206ENST00000552770 TXLNAP40222 546 aa9.5□□□□□ -0.89
CEP290-206ENST00000552770 FAM182BQ5T319 152 aa9.5□□□□□ -0.89
CEP290-206ENST00000552770 COG6Q9Y2V7 657 aa9.5□□□□□ -0.89
CEP290-206ENST00000552770 ZDHHC1Q8WTX9 485 aa9.49□□□□□ -0.89
CEP290-206ENST00000552770 CDK2AP1O14519 115 aa9.48□□□□□ -0.89
CEP290-206ENST00000552770 MAP7D1Q3KQU3 841 aa9.48□□□□□ -0.89
CEP290-206ENST00000552770 EFSO43281 561 aa9.47□□□□□ -0.89
CEP290-206ENST00000552770 FAM157BP0CG42 384 aa9.47□□□□□ -0.89
CEP290-206ENST00000552770 NBPF1Q3BBV0 1214 aa9.47□□□□□ -0.89
CEP290-206ENST00000552770 POM121Q96HA1 1249 aa9.47□□□□□ -0.89
CEP290-206ENST00000552770 CABP1Q9NZU7 370 aa9.47□□□□□ -0.89
CEP290-206ENST00000552770 DOC2BQ14184 412 aa9.46□□□□□ -0.9
CEP290-206ENST00000552770 WASHC4Q2M389 1173 aa9.46□□□□□ -0.9
CEP290-206ENST00000552770 ZNF468Q5VIY5 522 aaPredicted RBP9.46□□□□□ -0.9
CEP290-206ENST00000552770 ZDHHC3Q9NYG2 299 aa9.46□□□□□ -0.9
CEP290-206ENST00000552770 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
CEP290-206ENST00000552770 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.45□□□□□ -0.9
CEP290-206ENST00000552770 MDFIQ99750 246 aa9.45□□□□□ -0.9
CEP290-206ENST00000552770 AVENQ9NQS1 362 aaPredicted RBP9.45□□□□□ -0.9
CEP290-206ENST00000552770 TATP17735 454 aaPredicted RBP9.44□□□□□ -0.9
CEP290-206ENST00000552770 SEMA3FQ13275 785 aa9.44□□□□□ -0.9
CEP290-206ENST00000552770 TBCELQ5QJ74 424 aa9.44□□□□□ -0.9
CEP290-206ENST00000552770 SH3PXD2AQ5TCZ1 1133 aa9.44□□□□□ -0.9
CEP290-206ENST00000552770 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
CEP290-206ENST00000552770 KRTAP4-8Q9BYQ9 185 aa9.44□□□□□ -0.9
CEP290-206ENST00000552770 NOP53Q9NZM5 478 aaKnown RBP9.44□□□□□ -0.9
CEP290-206ENST00000552770 SAMD5Q5TGI4 173 aa9.43□□□□□ -0.9
CEP290-206ENST00000552770 C7orf43Q8WVR3 580 aa9.43□□□□□ -0.9
CEP290-206ENST00000552770 ZNF358Q9NW07 568 aa9.43□□□□□ -0.9
CEP290-206ENST00000552770 SCHIP1Q9P0W5 487 aaPredicted RBP9.43□□□□□ -0.9
CEP290-206ENST00000552770 PIK3R2O00459 728 aa9.42□□□□□ -0.9
CEP290-206ENST00000552770 EPHA4P54764 986 aa9.42□□□□□ -0.9
CEP290-206ENST00000552770 CLUAP1Q96AJ1 413 aa9.42□□□□□ -0.9
CEP290-206ENST00000552770 MARK1Q9P0L2 795 aa9.42□□□□□ -0.9
CEP290-206ENST00000552770 PRR12Q9ULL5 1215 aa9.42□□□□□ -0.9
CEP290-206ENST00000552770 GTF2IP78347 998 aa9.41□□□□□ -0.9
CEP290-206ENST00000552770 LRRC69Q6ZNQ3 347 aa9.41□□□□□ -0.9
CEP290-206ENST00000552770 BICDL1Q6ZP65 573 aa9.41□□□□□ -0.9
CEP290-206ENST00000552770 GJA3Q9Y6H8 435 aa9.41□□□□□ -0.9
CEP290-206ENST00000552770 SKIP12755 728 aa9.4□□□□□ -0.9
CEP290-206ENST00000552770 NCOA4Q13772 614 aa9.4□□□□□ -0.9
CEP290-206ENST00000552770 COL9A3Q14050 684 aaPredicted RBP9.4□□□□□ -0.9
CEP290-206ENST00000552770 SYT9Q86SS6 491 aa9.4□□□□□ -0.9
CEP290-206ENST00000552770 DEPDC4Q8N2C3 294 aa9.4□□□□□ -0.9
CEP290-206ENST00000552770 L3MBTL2Q969R5 705 aa9.4□□□□□ -0.9
CEP290-206ENST00000552770 SLC30A3Q99726 388 aa9.4□□□□□ -0.9
CEP290-206ENST00000552770 SEMA6BQ9H3T3 888 aa9.4□□□□□ -0.9
CEP290-206ENST00000552770 A6NJR5 290 aa9.39□□□□□ -0.91
CEP290-206ENST00000552770 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
CEP290-206ENST00000552770 EML1O00423 815 aa9.39□□□□□ -0.91
CEP290-206ENST00000552770 SFSWAPQ12872 951 aaKnown RBP9.39□□□□□ -0.91
CEP290-206ENST00000552770 EML3Q32P44 896 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms