RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 MSX1P28360 303 aa9.66□□□□□ -0.86
RAB3IP-217ENST00000552610 SEC13P55735 322 aa9.66□□□□□ -0.86
RAB3IP-217ENST00000552610 SV2AQ7L0J3 742 aa9.66□□□□□ -0.86
RAB3IP-217ENST00000552610 ANKMY2Q8IV38 441 aa9.66□□□□□ -0.86
RAB3IP-217ENST00000552610 TSPAN10Q9H1Z9 355 aaPredicted RBP9.66□□□□□ -0.86
RAB3IP-217ENST00000552610 CABP1Q9NZU7 370 aa9.66□□□□□ -0.86
RAB3IP-217ENST00000552610 SERPINA10Q9UK55 444 aa9.66□□□□□ -0.86
RAB3IP-217ENST00000552610 ATP4AP20648 1035 aa9.65□□□□□ -0.86
RAB3IP-217ENST00000552610 KRT76Q01546 638 aa9.65□□□□□ -0.86
RAB3IP-217ENST00000552610 RBM19Q9Y4C8 960 aaKnown RBP9.65□□□□□ -0.86
RAB3IP-217ENST00000552610 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
RAB3IP-217ENST00000552610 RUBCNLQ9H714 662 aa9.64□□□□□ -0.87
RAB3IP-217ENST00000552610 LGR5O75473 907 aa9.63□□□□□ -0.87
RAB3IP-217ENST00000552610 RNFT1Q5M7Z0 435 aa9.63□□□□□ -0.87
RAB3IP-217ENST00000552610 SH3PXD2AQ5TCZ1 1133 aa9.63□□□□□ -0.87
RAB3IP-217ENST00000552610 ZMIZ1Q9ULJ6 1067 aa9.63□□□□□ -0.87
RAB3IP-217ENST00000552610 NOVA2Q9UNW9 492 aaKnown RBP9.63□□□□□ -0.87
RAB3IP-217ENST00000552610 C21orf2O43822 256 aa9.62□□□□□ -0.87
RAB3IP-217ENST00000552610 TXLNAP40222 546 aa9.62□□□□□ -0.87
RAB3IP-217ENST00000552610 TEAD4Q15561 434 aa9.62□□□□□ -0.87
RAB3IP-217ENST00000552610 AIDAQ96BJ3 306 aa9.62□□□□□ -0.87
RAB3IP-217ENST00000552610 COL25A1Q9BXS0 654 aaPredicted RBP9.62□□□□□ -0.87
RAB3IP-217ENST00000552610 NUCKS1Q9H1E3 243 aaKnown RBP9.62□□□□□ -0.87
RAB3IP-217ENST00000552610 GPR25O00155 361 aa9.61□□□□□ -0.87
RAB3IP-217ENST00000552610 UBAP2LQ14157 1087 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-217ENST00000552610 GAS6Q14393 721 aa9.61□□□□□ -0.87
RAB3IP-217ENST00000552610 GTPBP3Q969Y2 492 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-217ENST00000552610 GMCL1Q96IK5 515 aa9.61□□□□□ -0.87
RAB3IP-217ENST00000552610 H7C1W4 665 aa9.6□□□□□ -0.87
RAB3IP-217ENST00000552610 EML1O00423 815 aa9.6□□□□□ -0.87
RAB3IP-217ENST00000552610 NOS2P35228 1153 aa9.6□□□□□ -0.87
RAB3IP-217ENST00000552610 L3MBTL2Q969R5 705 aa9.6□□□□□ -0.87
RAB3IP-217ENST00000552610 PBXIP1Q96AQ6 731 aa9.6□□□□□ -0.87
RAB3IP-217ENST00000552610 CRISPLD1Q9H336 500 aa9.6□□□□□ -0.87
RAB3IP-217ENST00000552610 ZDHHC3Q9NYG2 299 aa9.6□□□□□ -0.87
RAB3IP-217ENST00000552610 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
RAB3IP-217ENST00000552610 PSMA6P60900 246 aaKnown RBP9.59□□□□□ -0.87
RAB3IP-217ENST00000552610 NBPF1Q3BBV0 1214 aa9.59□□□□□ -0.87
RAB3IP-217ENST00000552610 POTEAQ6S8J7 498 aa9.59□□□□□ -0.87
RAB3IP-217ENST00000552610 GAS2L2Q8NHY3 880 aa9.59□□□□□ -0.87
RAB3IP-217ENST00000552610 C1orf216Q8TAB5 229 aa9.59□□□□□ -0.87
RAB3IP-217ENST00000552610 STK32AQ8WU08 396 aa9.59□□□□□ -0.87
RAB3IP-217ENST00000552610 CNTNAP3BQ96NU0 1288 aa9.59□□□□□ -0.87
RAB3IP-217ENST00000552610 CNTNAP3Q9BZ76 1288 aa9.59□□□□□ -0.87
RAB3IP-217ENST00000552610 SERTM1A2A2V5 107 aa9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 SUPT5HO00267 1087 aaKnown RBP9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 ATG7O95352 703 aa9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 CSB-PGBD3P0DP91 1061 aa9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 ELOAQ14241 798 aaKnown RBP9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 PGBD3Q8N328 593 aa9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 FAM200AQ8TCP9 573 aa9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 SCG3Q8WXD2 468 aaKnown RBP9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 HINFPQ9BQA5 517 aa9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 ZNF232Q9UNY5 417 aa9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 ATAD2Q6PL18 1390 aa9.58□□□□□ -0.88
RAB3IP-217ENST00000552610 PPP1R12BO60237 982 aaPredicted RBP9.57□□□□□ -0.88
RAB3IP-217ENST00000552610 LBRQ14739 615 aaKnown RBP9.57□□□□□ -0.88
RAB3IP-217ENST00000552610 KLRG1Q96E93 195 aa9.57□□□□□ -0.88
RAB3IP-217ENST00000552610 TATP17735 454 aaPredicted RBP9.56□□□□□ -0.88
RAB3IP-217ENST00000552610 HIRAP54198 1017 aaPredicted RBP9.56□□□□□ -0.88
RAB3IP-217ENST00000552610 ZIC5Q96T25 663 aa9.56□□□□□ -0.88
RAB3IP-217ENST00000552610 A0A1W2PNR3 127 aa9.55□□□□□ -0.88
RAB3IP-217ENST00000552610 FAM69CQ0P6D2 419 aa9.55□□□□□ -0.88
RAB3IP-217ENST00000552610 EFHC2Q5JST6 749 aa9.55□□□□□ -0.88
RAB3IP-217ENST00000552610 C2orf49Q9BVC5 232 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-217ENST00000552610 IGFBP4P22692 258 aa9.54□□□□□ -0.88
RAB3IP-217ENST00000552610 ARSJQ5FYB0 599 aaPredicted RBP9.54□□□□□ -0.88
RAB3IP-217ENST00000552610 STAG2Q8N3U4 1231 aa9.54□□□□□ -0.88
RAB3IP-217ENST00000552610 CHMP7Q8WUX9 453 aaPredicted RBP9.54□□□□□ -0.88
RAB3IP-217ENST00000552610 C7orf43Q8WVR3 580 aa9.54□□□□□ -0.88
RAB3IP-217ENST00000552610 HCN4Q9Y3Q4 1203 aa9.54□□□□□ -0.88
RAB3IP-217ENST00000552610 ACIN1Q9UKV3 1341 aaKnown RBP9.54□□□□□ -0.88
RAB3IP-217ENST00000552610 WEE1P30291 646 aa9.53□□□□□ -0.88
RAB3IP-217ENST00000552610 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
RAB3IP-217ENST00000552610 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
RAB3IP-217ENST00000552610 PHACTR1Q9C0D0 580 aa9.53□□□□□ -0.88
RAB3IP-217ENST00000552610 NDFIP2Q9NV92 336 aa9.53□□□□□ -0.88
RAB3IP-217ENST00000552610 CHMP3Q9Y3E7 222 aa9.53□□□□□ -0.88
RAB3IP-217ENST00000552610 INSM1Q01101 510 aaPredicted RBP9.52□□□□□ -0.89
RAB3IP-217ENST00000552610 BICDL1Q6ZP65 573 aa9.52□□□□□ -0.89
RAB3IP-217ENST00000552610 NLRP8Q86W28 1048 aa9.52□□□□□ -0.89
RAB3IP-217ENST00000552610 ABHD17AQ96GS6 310 aa9.52□□□□□ -0.89
RAB3IP-217ENST00000552610 TRERF1Q96PN7 1200 aa9.52□□□□□ -0.89
RAB3IP-217ENST00000552610 MBIPQ9NS73 344 aa9.52□□□□□ -0.89
RAB3IP-217ENST00000552610 HCN2Q9UL51 889 aa9.52□□□□□ -0.89
RAB3IP-217ENST00000552610 BNIP3LO60238 219 aa9.51□□□□□ -0.89
RAB3IP-217ENST00000552610 SWI5Q1ZZU3 235 aa9.51□□□□□ -0.89
RAB3IP-217ENST00000552610 RHPN1Q8TCX5 695 aa9.51□□□□□ -0.89
RAB3IP-217ENST00000552610 ZCCHC2Q9C0B9 1178 aaKnown RBP9.51□□□□□ -0.89
RAB3IP-217ENST00000552610 C1orf53Q5VUE5 145 aa9.5□□□□□ -0.89
RAB3IP-217ENST00000552610 ALDH16A1Q8IZ83 802 aa9.5□□□□□ -0.89
RAB3IP-217ENST00000552610 ZSCAN1Q8NBB4 408 aa9.5□□□□□ -0.89
RAB3IP-217ENST00000552610 CFHR5Q9BXR6 569 aa9.5□□□□□ -0.89
RAB3IP-217ENST00000552610 SLURP2P0DP57 97 aa9.49□□□□□ -0.89
RAB3IP-217ENST00000552610 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
RAB3IP-217ENST00000552610 OCLNQ16625 522 aa9.49□□□□□ -0.89
RAB3IP-217ENST00000552610 FIGNL1Q6PIW4 674 aa9.49□□□□□ -0.89
RAB3IP-217ENST00000552610 NGLY1Q96IV0 654 aa9.49□□□□□ -0.89
RAB3IP-217ENST00000552610 PRIMPOLQ96LW4 560 aa9.49□□□□□ -0.89
RAB3IP-217ENST00000552610 SLAIN2Q9P270 581 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms