RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 ZNF831Q5JPB2 1677 aa18.47■□□□□ 0.55
SMARCC2-212ENST00000552566 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
SMARCC2-212ENST00000552566 MRC1P22897 1456 aa18.46■□□□□ 0.55
SMARCC2-212ENST00000552566 STARD3NLO95772 234 aa18.46■□□□□ 0.55
SMARCC2-212ENST00000552566 KCNA3P22001 575 aa18.46■□□□□ 0.55
SMARCC2-212ENST00000552566 TM4SF1P30408 202 aa18.46■□□□□ 0.55
SMARCC2-212ENST00000552566 CHRNA5P30532 468 aa18.46■□□□□ 0.55
SMARCC2-212ENST00000552566 NUDCQ9Y266 331 aa18.46■□□□□ 0.55
SMARCC2-212ENST00000552566 COL15A1P39059 1388 aa18.45■□□□□ 0.54
SMARCC2-212ENST00000552566 DALRD3Q5D0E6 543 aaKnown RBP18.45■□□□□ 0.54
SMARCC2-212ENST00000552566 ZNF496Q96IT1 587 aaPredicted RBP18.45■□□□□ 0.54
SMARCC2-212ENST00000552566 PHACTR3Q96KR7 559 aa18.45■□□□□ 0.54
SMARCC2-212ENST00000552566 NARFQ9UHQ1 456 aa18.45■□□□□ 0.54
SMARCC2-212ENST00000552566 ZNF330Q9Y3S2 320 aaPredicted RBP18.45■□□□□ 0.54
SMARCC2-212ENST00000552566 COL5A3P25940 1745 aaPredicted RBP18.45■□□□□ 0.54
SMARCC2-212ENST00000552566 U2AF1L5P0DN76 240 aaPredicted RBP18.44■□□□□ 0.54
SMARCC2-212ENST00000552566 U2AF1Q01081 240 aaKnown RBP eCLIP18.44■□□□□ 0.54
SMARCC2-212ENST00000552566 NFIXQ14938 502 aa18.44■□□□□ 0.54
SMARCC2-212ENST00000552566 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
SMARCC2-212ENST00000552566 MRS2Q9HD23 443 aa18.44■□□□□ 0.54
SMARCC2-212ENST00000552566 KCPQ6ZWJ8 1503 aa18.44■□□□□ 0.54
SMARCC2-212ENST00000552566 C4AP0C0L4 1744 aa18.43■□□□□ 0.54
SMARCC2-212ENST00000552566 BICDL1Q6ZP65 573 aa18.43■□□□□ 0.54
SMARCC2-212ENST00000552566 RSPH6AQ9H0K4 717 aa18.42■□□□□ 0.54
SMARCC2-212ENST00000552566 TJP1Q07157 1748 aa18.42■□□□□ 0.54
SMARCC2-212ENST00000552566 SERPINB2P05120 415 aa18.41■□□□□ 0.54
SMARCC2-212ENST00000552566 C9orf131Q5VYM1 1079 aa18.41■□□□□ 0.54
SMARCC2-212ENST00000552566 BCL2L12Q9HB09 334 aa18.41■□□□□ 0.54
SMARCC2-212ENST00000552566 HEG1Q9ULI3 1381 aa18.41■□□□□ 0.54
SMARCC2-212ENST00000552566 A0A087WZG4 1122 aa18.4■□□□□ 0.54
SMARCC2-212ENST00000552566 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
SMARCC2-212ENST00000552566 NPM2Q86SE8 214 aaKnown RBP18.4■□□□□ 0.54
SMARCC2-212ENST00000552566 FMNL2Q96PY5 1086 aa18.4■□□□□ 0.54
SMARCC2-212ENST00000552566 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
SMARCC2-212ENST00000552566 KCNQ3O43525 872 aa18.39■□□□□ 0.53
SMARCC2-212ENST00000552566 EIF5P55010 431 aaKnown RBP18.39■□□□□ 0.53
SMARCC2-212ENST00000552566 RTF1Q92541 710 aaKnown RBP18.39■□□□□ 0.53
SMARCC2-212ENST00000552566 TBC1D2BQ9UPU7 963 aa18.39■□□□□ 0.53
SMARCC2-212ENST00000552566 SCN11AQ9UI33 1791 aa18.39■□□□□ 0.53
SMARCC2-212ENST00000552566 KIF3CO14782 793 aa18.38■□□□□ 0.53
SMARCC2-212ENST00000552566 MYH14Q7Z406 1995 aaKnown RBP18.38■□□□□ 0.53
SMARCC2-212ENST00000552566 A1BGP04217 495 aa18.37■□□□□ 0.53
SMARCC2-212ENST00000552566 MCM10Q7L590 875 aa18.37■□□□□ 0.53
SMARCC2-212ENST00000552566 RNF181Q9P0P0 153 aa18.37■□□□□ 0.53
SMARCC2-212ENST00000552566 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
SMARCC2-212ENST00000552566 TBC1D9BQ66K14 1250 aa18.36■□□□□ 0.53
SMARCC2-212ENST00000552566 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
SMARCC2-212ENST00000552566 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
SMARCC2-212ENST00000552566 N4BP2Q86UW6 1770 aaPredicted RBP18.35■□□□□ 0.53
SMARCC2-212ENST00000552566 HSPA6P17066 643 aa18.35■□□□□ 0.53
SMARCC2-212ENST00000552566 IL6STP40189 918 aaPredicted RBP18.35■□□□□ 0.53
SMARCC2-212ENST00000552566 DCTN1Q14203 1278 aa18.35■□□□□ 0.53
SMARCC2-212ENST00000552566 NMRK2Q9NPI5 230 aa18.35■□□□□ 0.53
SMARCC2-212ENST00000552566 H0YIN7 160 aa18.34■□□□□ 0.53
SMARCC2-212ENST00000552566 PIP4K2AP48426 406 aaPredicted RBP18.34■□□□□ 0.53
SMARCC2-212ENST00000552566 CCDC24Q8N4L8 307 aa18.34■□□□□ 0.53
SMARCC2-212ENST00000552566 KIAA1551Q9HCM1 1747 aa18.34■□□□□ 0.53
SMARCC2-212ENST00000552566 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
SMARCC2-212ENST00000552566 NPHP1O15259 732 aa18.33■□□□□ 0.52
SMARCC2-212ENST00000552566 TTLL6Q8N841 843 aa18.33■□□□□ 0.52
SMARCC2-212ENST00000552566 USP16Q9Y5T5 823 aa18.33■□□□□ 0.52
SMARCC2-212ENST00000552566 KIF13BQ9NQT8 1826 aa18.33■□□□□ 0.52
SMARCC2-212ENST00000552566 PRAMEF22A3QJZ6 481 aa18.32■□□□□ 0.52
SMARCC2-212ENST00000552566 RASSF7Q02833 373 aa18.32■□□□□ 0.52
SMARCC2-212ENST00000552566 CARMIL3Q8ND23 1372 aa18.31■□□□□ 0.52
SMARCC2-212ENST00000552566 TOMM70O94826 608 aa18.31■□□□□ 0.52
SMARCC2-212ENST00000552566 NEFMP07197 916 aa18.31■□□□□ 0.52
SMARCC2-212ENST00000552566 SNRPA1P09661 255 aaKnown RBP18.31■□□□□ 0.52
SMARCC2-212ENST00000552566 CCDC184Q52MB2 194 aa18.31■□□□□ 0.52
SMARCC2-212ENST00000552566 DZIP3Q86Y13 1208 aaKnown RBP18.31■□□□□ 0.52
SMARCC2-212ENST00000552566 C16orf71Q8IYS4 520 aaPredicted RBP18.31■□□□□ 0.52
SMARCC2-212ENST00000552566 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
SMARCC2-212ENST00000552566 ZNF622Q969S3 477 aaKnown RBP eCLIP18.31■□□□□ 0.521e-12■□□□□ 8.7
SMARCC2-212ENST00000552566 CAMTA2O94983 1202 aa18.3■□□□□ 0.52
SMARCC2-212ENST00000552566 SETDB2Q96T68 719 aa18.3■□□□□ 0.52
SMARCC2-212ENST00000552566 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
SMARCC2-212ENST00000552566 KDM2BQ8NHM5 1336 aa18.29■□□□□ 0.52
SMARCC2-212ENST00000552566 HTATSF1O43719 755 aaKnown RBP18.29■□□□□ 0.52
SMARCC2-212ENST00000552566 PRR5LQ6MZQ0 368 aa18.29■□□□□ 0.52
SMARCC2-212ENST00000552566 MIS18AQ9NYP9 233 aa18.29■□□□□ 0.52
SMARCC2-212ENST00000552566 PDE6BP35913 854 aa18.28■□□□□ 0.52
SMARCC2-212ENST00000552566 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
SMARCC2-212ENST00000552566 CNBD1Q8NA66 436 aa18.28■□□□□ 0.52
SMARCC2-212ENST00000552566 PNISRQ8TF01 805 aaKnown RBP18.28■□□□□ 0.52
SMARCC2-212ENST00000552566 BRIP1Q9BX63 1249 aa18.28■□□□□ 0.52
SMARCC2-212ENST00000552566 PNNQ9H307 717 aaKnown RBP18.28■□□□□ 0.52
SMARCC2-212ENST00000552566 LMNB1P20700 586 aa18.27■□□□□ 0.52
SMARCC2-212ENST00000552566 RRAGCQ9HB90 399 aa18.27■□□□□ 0.52
SMARCC2-212ENST00000552566 ST5P78524 1137 aa18.26■□□□□ 0.51
SMARCC2-212ENST00000552566 C21orf2O43822 256 aa18.25■□□□□ 0.51
SMARCC2-212ENST00000552566 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
SMARCC2-212ENST00000552566 APLP1P51693 650 aa18.24■□□□□ 0.51
SMARCC2-212ENST00000552566 PRELPP51888 382 aa18.24■□□□□ 0.51
SMARCC2-212ENST00000552566 NBPF5PQ86XG9 351 aaPredicted RBP18.24■□□□□ 0.51
SMARCC2-212ENST00000552566 PDZRN3Q9UPQ7 1066 aa18.24■□□□□ 0.51
SMARCC2-212ENST00000552566 ZNF652Q9Y2D9 606 aa18.24■□□□□ 0.51
SMARCC2-212ENST00000552566 FAM177BA6PVY3 158 aa18.23■□□□□ 0.51
SMARCC2-212ENST00000552566 NBPF26B4DH59 902 aa18.23■□□□□ 0.51
SMARCC2-212ENST00000552566 NFKBIEO00221 500 aa18.23■□□□□ 0.51
SMARCC2-212ENST00000552566 NBPF10Q6P3W6 841 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms