RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ZBTB39O15060 712 aa6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 HDLBPQ00341 1268 aaKnown RBP6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 PLCB3Q01970 1234 aa6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 EHHADHQ08426 723 aa6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 TBCELQ5QJ74 424 aa6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 RC3H1Q5TC82 1133 aaKnown RBP6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 ZNF295-AS1Q8N0V1 137 aa6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 EHBP1Q8NDI1 1231 aa6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 VTI1AQ96AJ9 217 aa6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 PRKD2Q9BZL6 878 aa6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 USP3Q9Y6I4 520 aa6.4□□□□□ -1.38
LSM6P2-201ENST00000552208 CDK2AP1O14519 115 aa6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 GPR182O15218 404 aa6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 PRPF40AO75400 957 aaKnown RBP6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 IL2RAP01589 272 aa6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 HIRAP54198 1017 aaPredicted RBP6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 PSMA6P60900 246 aaKnown RBP6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 MYT1Q01538 1121 aa6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 ARID5BQ14865 1188 aa6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 ESCO1Q5FWF5 840 aa6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 CCDC116Q8IYX3 515 aa6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 KDF1Q8NAX2 398 aaPredicted RBP6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 RNF19AQ9NV58 838 aa6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 PARP2Q9UGN5 583 aa6.39□□□□□ -1.39
LSM6P2-201ENST00000552208 ADH1CP00326 375 aa6.38□□□□□ -1.39
LSM6P2-201ENST00000552208 LDHBP07195 334 aaKnown RBP6.38□□□□□ -1.39
LSM6P2-201ENST00000552208 DAB2P98082 770 aa6.38□□□□□ -1.39
LSM6P2-201ENST00000552208 FGD1P98174 961 aa6.38□□□□□ -1.39
LSM6P2-201ENST00000552208 NR5A1Q13285 461 aa6.38□□□□□ -1.39
LSM6P2-201ENST00000552208 NAALADL2Q58DX5 795 aa6.38□□□□□ -1.39
LSM6P2-201ENST00000552208 TMC4Q7Z404 712 aa6.38□□□□□ -1.39
LSM6P2-201ENST00000552208 METTL16Q86W50 562 aaKnown RBP6.38□□□□□ -1.39
LSM6P2-201ENST00000552208 BCL11AQ9H165 835 aa6.38□□□□□ -1.39
LSM6P2-201ENST00000552208 EML1O00423 815 aa6.37□□□□□ -1.39
LSM6P2-201ENST00000552208 NR3C2P08235 984 aa6.37□□□□□ -1.39
LSM6P2-201ENST00000552208 RAD51AP2Q09MP3 1159 aa6.37□□□□□ -1.39
LSM6P2-201ENST00000552208 PDE3BQ13370 1112 aa6.37□□□□□ -1.39
LSM6P2-201ENST00000552208 GJD3Q8N144 294 aa6.37□□□□□ -1.39
LSM6P2-201ENST00000552208 ZDHHC1Q8WTX9 485 aa6.37□□□□□ -1.39
LSM6P2-201ENST00000552208 DUSP9Q99956 384 aaKnown RBP6.37□□□□□ -1.39
LSM6P2-201ENST00000552208 TLL2Q9Y6L7 1015 aa6.37□□□□□ -1.39
LSM6P2-201ENST00000552208 CD2BP2O95400 341 aaKnown RBP6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 ERCC5P28715 1186 aaPredicted RBP6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 TEAD4Q15561 434 aa6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 ENOX2Q16206 610 aaKnown RBP6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 ATCAYQ86WG3 371 aa6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 ABTB2Q8N961 1025 aa6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 EMID1Q96A84 441 aaPredicted RBP6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 FAM161BQ96MY7 647 aa6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 ESYT1Q9BSJ8 1104 aa6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 ARHGEF10LQ9HCE6 1279 aa6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 RAB6BQ9NRW1 208 aa6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 WWC3Q9ULE0 1092 aa6.36□□□□□ -1.39
LSM6P2-201ENST00000552208 NRG2O14511 850 aaPredicted RBP6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 BRD2P25440 801 aaKnown RBP6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 MAPK8P45983 427 aa6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 XPCQ01831 940 aaPredicted RBP6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 SH3PXD2AQ5TCZ1 1133 aa6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 C9orf131Q5VYM1 1079 aa6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 ETFBKMTQ8IXQ9 262 aa6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 TMC1Q8TDI8 760 aa6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 PIK3R5Q8WYR1 880 aa6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 CNKSR1Q969H4 720 aa6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 SETDB2Q96T68 719 aa6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 FHDC1Q9C0D6 1143 aaPredicted RBP6.35□□□□□ -1.39
LSM6P2-201ENST00000552208 MZF1P28698 734 aaPredicted RBP6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 NOS2P35228 1153 aa6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 FANCCQ00597 558 aa6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 CLN3Q13286 438 aa6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 AAMPQ13685 434 aa6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 PPP1R18Q6NYC8 613 aa6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 LIAT1Q6ZQX7 453 aa6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 CFHR5Q9BXR6 569 aa6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 METTL5Q9NRN9 209 aaKnown RBP6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 POLIQ9UNA4 740 aa6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 EMILIN1Q9Y6C2 1016 aa6.34□□□□□ -1.39
LSM6P2-201ENST00000552208 SERTM1A2A2V5 107 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 WNT7AO00755 349 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 SORBS3O60504 671 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 PDGFAP04085 211 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 ADH1AP07327 375 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 TLR1Q15399 786 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 RTN1Q16799 776 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 C11orf91Q3C1V1 193 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 ALDH16A1Q8IZ83 802 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 TMEM87AQ8NBN3 555 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 UBXN4Q92575 508 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 NIF3L1Q9GZT8 377 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 PGPEP1Q9NXJ5 209 aa6.33□□□□□ -1.4
LSM6P2-201ENST00000552208 USP5P45974 858 aa6.32□□□□□ -1.4
LSM6P2-201ENST00000552208 CENPCQ03188 943 aa6.32□□□□□ -1.4
LSM6P2-201ENST00000552208 SF3A1Q15459 793 aaKnown RBP6.32□□□□□ -1.4
LSM6P2-201ENST00000552208 ALG1LQ6GMV1 187 aa6.32□□□□□ -1.4
LSM6P2-201ENST00000552208 NT5DC4Q86YG4 428 aa6.32□□□□□ -1.4
LSM6P2-201ENST00000552208 FAM177A1Q8N128 213 aaPredicted RBP6.32□□□□□ -1.4
LSM6P2-201ENST00000552208 NBPF15Q8N660 670 aa6.32□□□□□ -1.4
LSM6P2-201ENST00000552208 C7orf43Q8WVR3 580 aa6.32□□□□□ -1.4
LSM6P2-201ENST00000552208 PUS7Q96PZ0 661 aaKnown RBP6.32□□□□□ -1.4
LSM6P2-201ENST00000552208 ITGAEP38570 1179 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms