RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 MAP3K5Q99683 1374 aa25.86■■□□□ 1.73
NPAS3-210ENST00000551492 TEFQ10587 303 aa25.85■■□□□ 1.73
NPAS3-210ENST00000551492 KIF24Q5T7B8 1368 aa25.84■■□□□ 1.73
NPAS3-210ENST00000551492 CRB1P82279 1406 aa25.83■■□□□ 1.73
NPAS3-210ENST00000551492 G2E3Q7L622 706 aa25.83■■□□□ 1.73
NPAS3-210ENST00000551492 GOLGB1Q14789 3259 aaKnown RBP25.83■■□□□ 1.73
NPAS3-210ENST00000551492 WDR17Q8IZU2 1322 aa25.83■■□□□ 1.73
NPAS3-210ENST00000551492 TRIM27P14373 513 aa25.83■■□□□ 1.72
NPAS3-210ENST00000551492 FAM182BQ5T319 152 aa25.83■■□□□ 1.72
NPAS3-210ENST00000551492 KDM2BQ8NHM5 1336 aa25.82■■□□□ 1.72
NPAS3-210ENST00000551492 SPDYE4A6NLX3 237 aa25.82■■□□□ 1.72
NPAS3-210ENST00000551492 KCNJ4P48050 445 aa25.82■■□□□ 1.72
NPAS3-210ENST00000551492 RNMTO43148 476 aaKnown RBP25.81■■□□□ 1.72
NPAS3-210ENST00000551492 BTBD11A6QL63 1104 aa25.8■■□□□ 1.72
NPAS3-210ENST00000551492 IL16Q14005 1332 aa25.8■■□□□ 1.72
NPAS3-210ENST00000551492 USP54Q70EL1 1684 aa25.8■■□□□ 1.72
NPAS3-210ENST00000551492 COL18A1P39060 1754 aa25.8■■□□□ 1.72
NPAS3-210ENST00000551492 TAF7Q15545 349 aaPredicted RBP25.8■■□□□ 1.72
NPAS3-210ENST00000551492 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.79■■□□□ 1.72
NPAS3-210ENST00000551492 F6X3S4 739 aa25.79■■□□□ 1.72
NPAS3-210ENST00000551492 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.79■■□□□ 1.72
NPAS3-210ENST00000551492 NGLY1Q96IV0 654 aa25.79■■□□□ 1.72
NPAS3-210ENST00000551492 MYCNP04198 464 aaPredicted RBP25.79■■□□□ 1.72
NPAS3-210ENST00000551492 AKAP4Q5JQC9 854 aa25.79■■□□□ 1.72
NPAS3-210ENST00000551492 SLC4A2P04920 1241 aa25.78■■□□□ 1.72
NPAS3-210ENST00000551492 NHSL1Q5SYE7 1610 aa25.78■■□□□ 1.72
NPAS3-210ENST00000551492 COL5A2P05997 1499 aaPredicted RBP25.78■■□□□ 1.72
NPAS3-210ENST00000551492 CPDO75976 1380 aa25.78■■□□□ 1.72
NPAS3-210ENST00000551492 PHKG2P15735 406 aa25.78■■□□□ 1.72
NPAS3-210ENST00000551492 ITPRIPQ8IWB1 547 aa25.78■■□□□ 1.72
NPAS3-210ENST00000551492 SYTL4Q96C24 671 aaPredicted RBP25.78■■□□□ 1.72
NPAS3-210ENST00000551492 C1orf115Q9H7X2 142 aa25.78■■□□□ 1.72
NPAS3-210ENST00000551492 TAF3Q5VWG9 929 aa25.76■■□□□ 1.71
NPAS3-210ENST00000551492 TMEM57Q8N5G2 664 aa25.76■■□□□ 1.71
NPAS3-210ENST00000551492 TBC1D2Q9BYX2 928 aa25.76■■□□□ 1.71
NPAS3-210ENST00000551492 PHLPP1O60346 1717 aa25.76■■□□□ 1.71
NPAS3-210ENST00000551492 CCDC173Q0VFZ6 552 aa25.75■■□□□ 1.71
NPAS3-210ENST00000551492 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.75■■□□□ 1.71
NPAS3-210ENST00000551492 ZCRB1Q8TBF4 217 aaKnown RBP25.75■■□□□ 1.71
NPAS3-210ENST00000551492 CRYBG1Q9Y4K1 1723 aa25.75■■□□□ 1.71
NPAS3-210ENST00000551492 FAM177BA6PVY3 158 aa25.74■■□□□ 1.71
NPAS3-210ENST00000551492 PTCD1O75127 700 aaKnown RBP25.74■■□□□ 1.71
NPAS3-210ENST00000551492 IL2RBP14784 551 aa25.74■■□□□ 1.71
NPAS3-210ENST00000551492 AMOTQ4VCS5 1084 aa25.74■■□□□ 1.71
NPAS3-210ENST00000551492 ZKSCAN2Q63HK3 967 aa25.74■■□□□ 1.71
NPAS3-210ENST00000551492 SLC4A10Q6U841 1118 aa25.74■■□□□ 1.71
NPAS3-210ENST00000551492 MRPL50Q8N5N7 158 aaKnown RBP25.74■■□□□ 1.71
NPAS3-210ENST00000551492 ZNF710Q8N1W2 664 aa25.73■■□□□ 1.71
NPAS3-210ENST00000551492 PPP1R9BQ96SB3 815 aa25.73■■□□□ 1.71
NPAS3-210ENST00000551492 PHAXQ9H814 394 aaKnown RBP25.73■■□□□ 1.71
NPAS3-210ENST00000551492 SPG7Q9UQ90 795 aa25.73■■□□□ 1.71
NPAS3-210ENST00000551492 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.72■■□□□ 1.71
NPAS3-210ENST00000551492 HDAC5Q9UQL6 1122 aa25.72■■□□□ 1.71
NPAS3-210ENST00000551492 ZNF771Q7L3S4 317 aaPredicted RBP25.71■■□□□ 1.71
NPAS3-210ENST00000551492 DZIP1LQ8IYY4 767 aaKnown RBP25.71■■□□□ 1.71
NPAS3-210ENST00000551492 CENPQQ7L2Z9 268 aaPredicted RBP25.71■■□□□ 1.71
NPAS3-210ENST00000551492 IFNL2Q8IZJ0 200 aa25.71■■□□□ 1.71
NPAS3-210ENST00000551492 ATF7IPQ6VMQ6 1270 aa25.7■■□□□ 1.71
NPAS3-210ENST00000551492 ACSBG1Q96GR2 724 aa25.7■■□□□ 1.71
NPAS3-210ENST00000551492 FAM98CQ17RN3 349 aaKnown RBP25.7■■□□□ 1.7
NPAS3-210ENST00000551492 CARD10Q9BWT7 1032 aa25.7■■□□□ 1.7
NPAS3-210ENST00000551492 NASPP49321 788 aaPredicted RBP25.69■■□□□ 1.7
NPAS3-210ENST00000551492 PROSER3Q2NL68 480 aa25.69■■□□□ 1.7
NPAS3-210ENST00000551492 IGHDP01880 384 aa25.68■■□□□ 1.7
NPAS3-210ENST00000551492 SASS6Q6UVJ0 657 aa25.68■■□□□ 1.7
NPAS3-210ENST00000551492 ISY1Q9ULR0 285 aaKnown RBP25.68■■□□□ 1.7
NPAS3-210ENST00000551492 PCDHB15Q9Y5E8 787 aa25.68■■□□□ 1.7
NPAS3-210ENST00000551492 KDM6AO15550 1401 aaPredicted RBP25.67■■□□□ 1.7
NPAS3-210ENST00000551492 EIF4A1P60842 406 aaKnown RBP25.67■■□□□ 1.7
NPAS3-210ENST00000551492 SRCAPQ6ZRS2 3230 aa25.67■■□□□ 1.7
NPAS3-210ENST00000551492 CABP4P57796 275 aa25.67■■□□□ 1.7
NPAS3-210ENST00000551492 ABCA3Q99758 1704 aa25.66■■□□□ 1.7
NPAS3-210ENST00000551492 AIMP1Q12904 312 aaKnown RBP25.66■■□□□ 1.7
NPAS3-210ENST00000551492 HDGFL1Q5TGJ6 251 aa25.66■■□□□ 1.7
NPAS3-210ENST00000551492 ZNF496Q96IT1 587 aaPredicted RBP25.66■■□□□ 1.7
NPAS3-210ENST00000551492 BCCIPQ9P287 314 aaKnown RBP eCLIP25.66■■□□□ 1.7
NPAS3-210ENST00000551492 CHPF2Q9P2E5 772 aa25.65■■□□□ 1.7
NPAS3-210ENST00000551492 COL16A1Q07092 1604 aaPredicted RBP25.65■■□□□ 1.7
NPAS3-210ENST00000551492 MYL6BP14649 208 aa25.65■■□□□ 1.7
NPAS3-210ENST00000551492 MEX3CQ5U5Q3 659 aaKnown RBP25.65■■□□□ 1.7
NPAS3-210ENST00000551492 CEMIPQ8WUJ3 1361 aa25.65■■□□□ 1.7
NPAS3-210ENST00000551492 ZNF500O60304 480 aaPredicted RBP25.64■■□□□ 1.7
NPAS3-210ENST00000551492 SLC52A2Q9HAB3 445 aa25.64■■□□□ 1.69
NPAS3-210ENST00000551492 ZNF330Q9Y3S2 320 aaPredicted RBP25.64■■□□□ 1.69
NPAS3-210ENST00000551492 FAM208AQ9UK61 1670 aaKnown RBP25.63■■□□□ 1.69
NPAS3-210ENST00000551492 DNAJC2Q99543 621 aaKnown RBP25.63■■□□□ 1.69
NPAS3-210ENST00000551492 USP16Q9Y5T5 823 aa25.63■■□□□ 1.69
NPAS3-210ENST00000551492 KCNQ4P56696 695 aa25.63■■□□□ 1.69
NPAS3-210ENST00000551492 TRIM6-TRIM34B2RNG4 842 aa25.62■■□□□ 1.69
NPAS3-210ENST00000551492 PRR29P0C7W0 189 aa25.62■■□□□ 1.69
NPAS3-210ENST00000551492 TRIM34Q9BYJ4 488 aa25.62■■□□□ 1.69
NPAS3-210ENST00000551492 HTATSF1O43719 755 aaKnown RBP25.62■■□□□ 1.69
NPAS3-210ENST00000551492 FKBP5Q13451 457 aaPredicted RBP25.61■■□□□ 1.69
NPAS3-210ENST00000551492 PTF1AQ7RTS3 328 aa25.61■■□□□ 1.69
NPAS3-210ENST00000551492 ZNF790Q6PG37 636 aa25.61■■□□□ 1.69
NPAS3-210ENST00000551492 NOL7Q9UMY1 257 aaKnown RBP25.61■■□□□ 1.69
NPAS3-210ENST00000551492 APPP05067 770 aa25.6■■□□□ 1.69
NPAS3-210ENST00000551492 ASAP1Q9ULH1 1129 aa25.6■■□□□ 1.69
NPAS3-210ENST00000551492 AHDC1Q5TGY3 1603 aaPredicted RBP25.6■■□□□ 1.69
NPAS3-210ENST00000551492 PSEN1P49768 467 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms