RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 INTS5Q6P9B9 1019 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-210ENST00000551352 NFATC2IPQ8NCF5 419 aa9.73□□□□□ -0.85
SMARCD1-210ENST00000551352 ZNF526Q8TF50 670 aaPredicted RBP9.73□□□□□ -0.85
SMARCD1-210ENST00000551352 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-210ENST00000551352 DICER1Q9UPY3 1922 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-210ENST00000551352 TNRC6CQ9HCJ0 1690 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-210ENST00000551352 NEFLP07196 543 aa9.72□□□□□ -0.85
SMARCD1-210ENST00000551352 DPEP1P16444 411 aa9.72□□□□□ -0.85
SMARCD1-210ENST00000551352 CABP4P57796 275 aa9.72□□□□□ -0.85
SMARCD1-210ENST00000551352 FKBP8Q14318 412 aa9.72□□□□□ -0.85
SMARCD1-210ENST00000551352 TRAPPC3LQ5T215 181 aa9.72□□□□□ -0.85
SMARCD1-210ENST00000551352 SUPT16HQ9Y5B9 1047 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-210ENST00000551352 USP42Q9H9J4 1324 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-210ENST00000551352 ARFGEF2Q9Y6D5 1785 aa9.72□□□□□ -0.85
SMARCD1-210ENST00000551352 FER1L6Q2WGJ9 1857 aa9.71□□□□□ -0.85
SMARCD1-210ENST00000551352 AMOTQ4VCS5 1084 aa9.71□□□□□ -0.86
SMARCD1-210ENST00000551352 DNAJC10Q8IXB1 793 aa9.71□□□□□ -0.86
SMARCD1-210ENST00000551352 HSP90AB1P08238 724 aaKnown RBP9.7□□□□□ -0.86
SMARCD1-210ENST00000551352 HMOX1P09601 288 aa9.7□□□□□ -0.86
SMARCD1-210ENST00000551352 ADRA2BP18089 450 aa9.7□□□□□ -0.86
SMARCD1-210ENST00000551352 SLC39A6Q13433 755 aa9.7□□□□□ -0.86
SMARCD1-210ENST00000551352 MTHFSDQ2M296 383 aaKnown RBP9.7□□□□□ -0.86
SMARCD1-210ENST00000551352 CCDC146Q8IYE0 955 aa9.7□□□□□ -0.86
SMARCD1-210ENST00000551352 BCL2L12Q9HB09 334 aa9.7□□□□□ -0.86
SMARCD1-210ENST00000551352 GPBP1L1Q9HC44 474 aaPredicted RBP9.7□□□□□ -0.86
SMARCD1-210ENST00000551352 SALL2Q9Y467 1007 aaPredicted RBP9.7□□□□□ -0.86
SMARCD1-210ENST00000551352 SOS1Q07889 1333 aaPredicted RBP9.7□□□□□ -0.86
SMARCD1-210ENST00000551352 POLRMTO00411 1230 aaKnown RBP9.69□□□□□ -0.86
SMARCD1-210ENST00000551352 RNMTO43148 476 aaKnown RBP9.69□□□□□ -0.86
SMARCD1-210ENST00000551352 HMGB2P26583 209 aaKnown RBP9.69□□□□□ -0.86
SMARCD1-210ENST00000551352 TM4SF1P30408 202 aa9.69□□□□□ -0.86
SMARCD1-210ENST00000551352 TGFB2P61812 414 aa9.69□□□□□ -0.86
SMARCD1-210ENST00000551352 NLGN1Q8N2Q7 840 aa9.69□□□□□ -0.86
SMARCD1-210ENST00000551352 CARMIL3Q8ND23 1372 aa9.69□□□□□ -0.86
SMARCD1-210ENST00000551352 ZNF521Q96K83 1311 aa9.69□□□□□ -0.86
SMARCD1-210ENST00000551352 SLC52A2Q9HAB3 445 aa9.69□□□□□ -0.86
SMARCD1-210ENST00000551352 BCS1LQ9Y276 419 aa9.69□□□□□ -0.86
SMARCD1-210ENST00000551352 COL15A1P39059 1388 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 APAF1O14727 1248 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 CYP19A1P11511 503 aaPredicted RBP9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 CHRNA5P30532 468 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 RFC4P35249 363 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 PRELPP51888 382 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 C1orf141Q5JVX7 400 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 NGEFQ8N5V2 710 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 ZBTB1Q9Y2K1 713 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 SLX4Q8IY92 1834 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 LAMB4A4D0S4 1761 aa9.68□□□□□ -0.86
SMARCD1-210ENST00000551352 HSPA6P17066 643 aa9.67□□□□□ -0.86
SMARCD1-210ENST00000551352 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
SMARCD1-210ENST00000551352 CDCA7LQ96GN5 454 aa9.67□□□□□ -0.86
SMARCD1-210ENST00000551352 NMRK2Q9NPI5 230 aa9.67□□□□□ -0.86
SMARCD1-210ENST00000551352 CCDC87Q9NVE4 849 aa9.67□□□□□ -0.86
SMARCD1-210ENST00000551352 KDM3BQ7LBC6 1761 aa9.67□□□□□ -0.86
SMARCD1-210ENST00000551352 RNF123Q5XPI4 1314 aa9.66□□□□□ -0.86
SMARCD1-210ENST00000551352 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
SMARCD1-210ENST00000551352 USPL1Q5W0Q7 1092 aa9.66□□□□□ -0.86
SMARCD1-210ENST00000551352 PARP3Q9Y6F1 533 aa9.66□□□□□ -0.86
SMARCD1-210ENST00000551352 FCHSD2O94868 740 aa9.65□□□□□ -0.86
SMARCD1-210ENST00000551352 U2AF1L5P0DN76 240 aaPredicted RBP9.65□□□□□ -0.86
SMARCD1-210ENST00000551352 U2AF1Q01081 240 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMARCD1-210ENST00000551352 NFIXQ14938 502 aa9.65□□□□□ -0.86
SMARCD1-210ENST00000551352 ARHGAP27Q6ZUM4 889 aa9.65□□□□□ -0.86
SMARCD1-210ENST00000551352 IL17REQ8NFR9 667 aa9.65□□□□□ -0.86
SMARCD1-210ENST00000551352 NUP98P52948 1817 aa9.64□□□□□ -0.87
SMARCD1-210ENST00000551352 U2SURPO15042 1029 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-210ENST00000551352 RASSF7Q02833 373 aa9.64□□□□□ -0.87
SMARCD1-210ENST00000551352 GOLGA2Q08379 1002 aa9.64□□□□□ -0.87
SMARCD1-210ENST00000551352 NCBP3Q53F19 620 aaKnown RBP9.64□□□□□ -0.87
SMARCD1-210ENST00000551352 C9orf131Q5VYM1 1079 aa9.64□□□□□ -0.87
SMARCD1-210ENST00000551352 NARFQ9UHQ1 456 aa9.64□□□□□ -0.87
SMARCD1-210ENST00000551352 CEMIPQ8WUJ3 1361 aa9.63□□□□□ -0.87
SMARCD1-210ENST00000551352 KCNQ3O43525 872 aa9.63□□□□□ -0.87
SMARCD1-210ENST00000551352 ERICH6BQ5W0A0 696 aa9.63□□□□□ -0.87
SMARCD1-210ENST00000551352 PHACTR3Q96KR7 559 aa9.63□□□□□ -0.87
SMARCD1-210ENST00000551352 PIM2Q9P1W9 311 aa9.63□□□□□ -0.87
SMARCD1-210ENST00000551352 RCAN3Q9UKA8 241 aa9.63□□□□□ -0.87
SMARCD1-210ENST00000551352 HEG1Q9ULI3 1381 aa9.63□□□□□ -0.87
SMARCD1-210ENST00000551352 EIF5P55010 431 aaKnown RBP9.62□□□□□ -0.87
SMARCD1-210ENST00000551352 IRX6P78412 446 aaPredicted RBP9.62□□□□□ -0.87
SMARCD1-210ENST00000551352 SLFN5Q08AF3 891 aa9.62□□□□□ -0.87
SMARCD1-210ENST00000551352 CCDC27Q2M243 656 aa9.62□□□□□ -0.87
SMARCD1-210ENST00000551352 DUSP27Q5VZP5 1158 aa9.62□□□□□ -0.87
SMARCD1-210ENST00000551352 WWC1Q8IX03 1113 aa9.62□□□□□ -0.87
SMARCD1-210ENST00000551352 TRMT2AQ8IZ69 625 aaKnown RBP9.62□□□□□ -0.87
SMARCD1-210ENST00000551352 DNAJC5GQ8N7S2 189 aa9.62□□□□□ -0.87
SMARCD1-210ENST00000551352 ZNF496Q96IT1 587 aaPredicted RBP9.62□□□□□ -0.87
SMARCD1-210ENST00000551352 PLEKHF1Q96S99 279 aa9.62□□□□□ -0.87
SMARCD1-210ENST00000551352 PRAMEF22A3QJZ6 481 aa9.61□□□□□ -0.87
SMARCD1-210ENST00000551352 E9PSI1 815 aa9.61□□□□□ -0.87
SMARCD1-210ENST00000551352 CANXP27824 592 aaKnown RBP9.61□□□□□ -0.87
SMARCD1-210ENST00000551352 HTRA3P83110 453 aa9.61□□□□□ -0.87
SMARCD1-210ENST00000551352 DALRD3Q5D0E6 543 aaKnown RBP9.61□□□□□ -0.87
SMARCD1-210ENST00000551352 VSIG10Q8N0Z9 540 aa9.61□□□□□ -0.87
SMARCD1-210ENST00000551352 RSPH6AQ9H0K4 717 aa9.61□□□□□ -0.87
SMARCD1-210ENST00000551352 PNNQ9H307 717 aaKnown RBP9.61□□□□□ -0.87
SMARCD1-210ENST00000551352 RRP7AQ9Y3A4 280 aaKnown RBP9.61□□□□□ -0.87
SMARCD1-210ENST00000551352 PCNTO95613 3336 aa9.61□□□□□ -0.87
SMARCD1-210ENST00000551352 MAPK8IP3Q9UPT6 1336 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms