RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
CR383656.13-201ENST00000550928 ZBTB1Q9Y2K1 713 aa17.82■□□□□ 0.44
CR383656.13-201ENST00000550928 ZPR1O75312 459 aa17.81■□□□□ 0.44
CR383656.13-201ENST00000550928 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
CR383656.13-201ENST00000550928 PRKRIP1Q9H875 184 aaPredicted RBP17.81■□□□□ 0.44
CR383656.13-201ENST00000550928 FKBP8Q14318 412 aa17.8■□□□□ 0.44
CR383656.13-201ENST00000550928 NARFQ9UHQ1 456 aa17.8■□□□□ 0.44
CR383656.13-201ENST00000550928 PARP3Q9Y6F1 533 aa17.8■□□□□ 0.44
CR383656.13-201ENST00000550928 YBX3P16989 372 aaKnown RBP eCLIP17.79■□□□□ 0.44
CR383656.13-201ENST00000550928 TM4SF1P30408 202 aa17.79■□□□□ 0.44
CR383656.13-201ENST00000550928 EIF5P55010 431 aaKnown RBP17.79■□□□□ 0.44
CR383656.13-201ENST00000550928 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
CR383656.13-201ENST00000550928 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
CR383656.13-201ENST00000550928 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
CR383656.13-201ENST00000550928 GRIN3BO60391 1043 aa17.78■□□□□ 0.44
CR383656.13-201ENST00000550928 A1BGP04217 495 aa17.78■□□□□ 0.44
CR383656.13-201ENST00000550928 MIS18AQ9NYP9 233 aa17.78■□□□□ 0.44
CR383656.13-201ENST00000550928 C4AP0C0L4 1744 aa17.78■□□□□ 0.44
CR383656.13-201ENST00000550928 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.44
CR383656.13-201ENST00000550928 A0A087WZG4 1122 aa17.77■□□□□ 0.44
CR383656.13-201ENST00000550928 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
CR383656.13-201ENST00000550928 COL15A1P39059 1388 aa17.77■□□□□ 0.43
CR383656.13-201ENST00000550928 IL6STP40189 918 aaPredicted RBP17.76■□□□□ 0.43
CR383656.13-201ENST00000550928 TGFB2P61812 414 aa17.76■□□□□ 0.43
CR383656.13-201ENST00000550928 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
CR383656.13-201ENST00000550928 BCL2L12Q9HB09 334 aa17.76■□□□□ 0.43
CR383656.13-201ENST00000550928 PRAMEF22A3QJZ6 481 aa17.75■□□□□ 0.43
CR383656.13-201ENST00000550928 RIPK4P57078 832 aa17.75■□□□□ 0.43
CR383656.13-201ENST00000550928 DDR1Q08345 913 aa17.75■□□□□ 0.43
CR383656.13-201ENST00000550928 CHD4Q14839 1912 aa17.74■□□□□ 0.43
CR383656.13-201ENST00000550928 ZNF316A6NFI3 1004 aaPredicted RBP17.74■□□□□ 0.43
CR383656.13-201ENST00000550928 TMPOP42166 694 aaKnown RBP17.74■□□□□ 0.43
CR383656.13-201ENST00000550928 THUMPD2Q9BTF0 503 aaKnown RBP17.74■□□□□ 0.43
CR383656.13-201ENST00000550928 ADAMTS8Q9UP79 889 aa17.74■□□□□ 0.43
CR383656.13-201ENST00000550928 A0A0G2JLW4 131 aa17.73■□□□□ 0.43
CR383656.13-201ENST00000550928 POLRMTO00411 1230 aaKnown RBP17.73■□□□□ 0.43
CR383656.13-201ENST00000550928 NFIXQ14938 502 aa17.73■□□□□ 0.43
CR383656.13-201ENST00000550928 WDR43Q15061 677 aaKnown RBP eCLIP17.73■□□□□ 0.43
CR383656.13-201ENST00000550928 TBC1D2BQ9UPU7 963 aa17.73■□□□□ 0.43
CR383656.13-201ENST00000550928 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
CR383656.13-201ENST00000550928 RUNDC1Q96C34 613 aa17.72■□□□□ 0.43
CR383656.13-201ENST00000550928 KIF13BQ9NQT8 1826 aa17.72■□□□□ 0.43
CR383656.13-201ENST00000550928 DPEP1P16444 411 aa17.71■□□□□ 0.43
CR383656.13-201ENST00000550928 NPM2Q86SE8 214 aaKnown RBP17.71■□□□□ 0.43
CR383656.13-201ENST00000550928 WWC3Q9ULE0 1092 aa17.71■□□□□ 0.43
CR383656.13-201ENST00000550928 ZNF330Q9Y3S2 320 aaPredicted RBP17.71■□□□□ 0.43
CR383656.13-201ENST00000550928 C10orf71Q711Q0 1435 aa17.71■□□□□ 0.43
CR383656.13-201ENST00000550928 EIF4A1P60842 406 aaKnown RBP17.7■□□□□ 0.42
CR383656.13-201ENST00000550928 GIGYF1O75420 1035 aaPredicted RBP17.69■□□□□ 0.42
CR383656.13-201ENST00000550928 SERPINB2P05120 415 aa17.69■□□□□ 0.42
CR383656.13-201ENST00000550928 KCNA3P22001 575 aa17.69■□□□□ 0.42
CR383656.13-201ENST00000550928 PIP4K2AP48426 406 aaPredicted RBP17.69■□□□□ 0.42
CR383656.13-201ENST00000550928 LMOD3Q0VAK6 560 aa17.69■□□□□ 0.42
CR383656.13-201ENST00000550928 NEUROD2Q15784 382 aa17.69■□□□□ 0.42
CR383656.13-201ENST00000550928 RRP7AQ9Y3A4 280 aaKnown RBP17.69■□□□□ 0.42
CR383656.13-201ENST00000550928 PXDNLA1KZ92 1463 aa17.69■□□□□ 0.42
CR383656.13-201ENST00000550928 NBPF26B4DH59 902 aa17.68■□□□□ 0.42
CR383656.13-201ENST00000550928 CAMTA2O94983 1202 aa17.68■□□□□ 0.42
CR383656.13-201ENST00000550928 NBPF10Q6P3W6 841 aaKnown RBP17.68■□□□□ 0.42
CR383656.13-201ENST00000550928 NBPF15Q8N660 670 aa17.68■□□□□ 0.42
CR383656.13-201ENST00000550928 BABAM1Q9NWV8 329 aa17.68■□□□□ 0.42
CR383656.13-201ENST00000550928 N4BP2Q86UW6 1770 aaPredicted RBP17.67■□□□□ 0.42
CR383656.13-201ENST00000550928 TBC1D9BQ66K14 1250 aa17.67■□□□□ 0.42
CR383656.13-201ENST00000550928 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
CR383656.13-201ENST00000550928 DZIP3Q86Y13 1208 aaKnown RBP17.67■□□□□ 0.42
CR383656.13-201ENST00000550928 ZNF784Q8NCA9 323 aaPredicted RBP17.67■□□□□ 0.42
CR383656.13-201ENST00000550928 PIM2Q9P1W9 311 aa17.66■□□□□ 0.42
CR383656.13-201ENST00000550928 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
CR383656.13-201ENST00000550928 TRIM35Q9UPQ4 493 aa17.66■□□□□ 0.42
CR383656.13-201ENST00000550928 BCS1LQ9Y276 419 aa17.66■□□□□ 0.42
CR383656.13-201ENST00000550928 KIAA1551Q9HCM1 1747 aa17.66■□□□□ 0.42
CR383656.13-201ENST00000550928 KDM3BQ7LBC6 1761 aa17.65■□□□□ 0.42
CR383656.13-201ENST00000550928 AFDNP55196 1824 aaKnown RBP17.64■□□□□ 0.41
CR383656.13-201ENST00000550928 CHRNA5P30532 468 aa17.64■□□□□ 0.41
CR383656.13-201ENST00000550928 CLEC4GQ6UXB4 293 aa17.64■□□□□ 0.41
CR383656.13-201ENST00000550928 SETDB2Q96T68 719 aa17.64■□□□□ 0.41
CR383656.13-201ENST00000550928 CCDC184Q52MB2 194 aa17.63■□□□□ 0.41
CR383656.13-201ENST00000550928 NRXN2Q9P2S2 1712 aa17.62■□□□□ 0.41
CR383656.13-201ENST00000550928 CHL1O00533 1208 aa17.62■□□□□ 0.41
CR383656.13-201ENST00000550928 UTRNP46939 3433 aa17.62■□□□□ 0.41
CR383656.13-201ENST00000550928 RGL2O15211 777 aa17.61■□□□□ 0.41
CR383656.13-201ENST00000550928 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
CR383656.13-201ENST00000550928 APAF1O14727 1248 aa17.6■□□□□ 0.41
CR383656.13-201ENST00000550928 ARHGAP27Q6ZUM4 889 aa17.6■□□□□ 0.41
CR383656.13-201ENST00000550928 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
CR383656.13-201ENST00000550928 ZNF652Q9Y2D9 606 aa17.6■□□□□ 0.41
CR383656.13-201ENST00000550928 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
CR383656.13-201ENST00000550928 CARMIL3Q8ND23 1372 aa17.59■□□□□ 0.41
CR383656.13-201ENST00000550928 H0YIN7 160 aa17.59■□□□□ 0.41
CR383656.13-201ENST00000550928 ANP32CO43423 234 aa17.59■□□□□ 0.41
CR383656.13-201ENST00000550928 MYL6BP14649 208 aa17.59■□□□□ 0.41
CR383656.13-201ENST00000550928 HLFQ16534 295 aa17.59■□□□□ 0.41
CR383656.13-201ENST00000550928 PRR5LQ6MZQ0 368 aa17.59■□□□□ 0.41
CR383656.13-201ENST00000550928 BRIP1Q9BX63 1249 aa17.59■□□□□ 0.41
CR383656.13-201ENST00000550928 LAS1LQ9Y4W2 734 aaKnown RBP17.59■□□□□ 0.41
CR383656.13-201ENST00000550928 BRCA1P38398 1863 aaKnown RBP17.58■□□□□ 0.41
CR383656.13-201ENST00000550928 SCN7AQ01118 1682 aa17.58■□□□□ 0.41
CR383656.13-201ENST00000550928 ERVV-1B6SEH8 477 aa17.58■□□□□ 0.4
CR383656.13-201ENST00000550928 EIF2S2P20042 333 aaKnown RBP17.58■□□□□ 0.4
CR383656.13-201ENST00000550928 C2CD5Q86YS7 1000 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms