RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 KRT76Q01546 638 aa8.67□□□□□ -1.02
SCAF11-214ENST00000550893 C4orf17Q53FE4 359 aa8.67□□□□□ -1.02
SCAF11-214ENST00000550893 GNASQ5JWF2 1037 aa8.67□□□□□ -1.02
SCAF11-214ENST00000550893 RIPOR1Q6ZS17 1223 aa8.67□□□□□ -1.02
SCAF11-214ENST00000550893 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
SCAF11-214ENST00000550893 CALR3Q96L12 384 aaKnown RBP8.67□□□□□ -1.02
SCAF11-214ENST00000550893 TFIP11Q9UBB9 837 aaKnown RBP8.67□□□□□ -1.02
SCAF11-214ENST00000550893 DBN1Q16643 649 aa8.66□□□□□ -1.02
SCAF11-214ENST00000550893 TRIM22Q8IYM9 498 aa8.66□□□□□ -1.02
SCAF11-214ENST00000550893 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
SCAF11-214ENST00000550893 COL25A1Q9BXS0 654 aaPredicted RBP8.66□□□□□ -1.02
SCAF11-214ENST00000550893 PSME1Q06323 249 aa8.65□□□□□ -1.02
SCAF11-214ENST00000550893 RNFT1Q5M7Z0 435 aa8.65□□□□□ -1.02
SCAF11-214ENST00000550893 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
SCAF11-214ENST00000550893 RHBDD1Q8TEB9 315 aa8.65□□□□□ -1.02
SCAF11-214ENST00000550893 ZNF837Q96EG3 531 aaPredicted RBP8.65□□□□□ -1.02
SCAF11-214ENST00000550893 CNTNAP3BQ96NU0 1288 aa8.65□□□□□ -1.02
SCAF11-214ENST00000550893 CNTNAP3Q9BZ76 1288 aa8.65□□□□□ -1.02
SCAF11-214ENST00000550893 ZNF777Q9ULD5 760 aaPredicted RBP8.65□□□□□ -1.02
SCAF11-214ENST00000550893 ZBTB7BO15156 539 aaPredicted RBP8.64□□□□□ -1.03
SCAF11-214ENST00000550893 F11P03951 625 aa8.64□□□□□ -1.03
SCAF11-214ENST00000550893 TRIM50Q86XT4 487 aa8.64□□□□□ -1.03
SCAF11-214ENST00000550893 ZSCAN1Q8NBB4 408 aa8.64□□□□□ -1.03
SCAF11-214ENST00000550893 MKRN1Q9UHC7 482 aaKnown RBP8.64□□□□□ -1.03
SCAF11-214ENST00000550893 KIAA1024Q9UPX6 916 aa8.64□□□□□ -1.03
SCAF11-214ENST00000550893 CUL7Q14999 1698 aa8.63□□□□□ -1.03
SCAF11-214ENST00000550893 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
SCAF11-214ENST00000550893 A6NJY4 79 aa8.63□□□□□ -1.03
SCAF11-214ENST00000550893 CLDN10P78369 228 aa8.63□□□□□ -1.03
SCAF11-214ENST00000550893 MTFR1Q15390 333 aa8.63□□□□□ -1.03
SCAF11-214ENST00000550893 GMCL1Q96IK5 515 aa8.63□□□□□ -1.03
SCAF11-214ENST00000550893 GPAMQ9HCL2 828 aa8.63□□□□□ -1.03
SCAF11-214ENST00000550893 ZNF358Q9NW07 568 aa8.63□□□□□ -1.03
SCAF11-214ENST00000550893 MAFBQ9Y5Q3 323 aaPredicted RBP8.63□□□□□ -1.03
SCAF11-214ENST00000550893 A0A1B0GTH6 734 aa8.62□□□□□ -1.03
SCAF11-214ENST00000550893 H7C1W4 665 aa8.62□□□□□ -1.03
SCAF11-214ENST00000550893 BACH1O14867 736 aa8.62□□□□□ -1.03
SCAF11-214ENST00000550893 ATP1A2P50993 1020 aa8.62□□□□□ -1.03
SCAF11-214ENST00000550893 PPP1R12CQ9BZL4 782 aa8.62□□□□□ -1.03
SCAF11-214ENST00000550893 DNAAF2Q9NVR5 837 aaKnown RBP8.62□□□□□ -1.03
SCAF11-214ENST00000550893 IQSEC3Q9UPP2 1182 aaPredicted RBP8.62□□□□□ -1.03
SCAF11-214ENST00000550893 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
SCAF11-214ENST00000550893 USP3Q9Y6I4 520 aa8.62□□□□□ -1.03
SCAF11-214ENST00000550893 FHAD1B1AJZ9 1412 aa8.62□□□□□ -1.03
SCAF11-214ENST00000550893 GPR25O00155 361 aa8.61□□□□□ -1.03
SCAF11-214ENST00000550893 CDK2AP1O14519 115 aa8.61□□□□□ -1.03
SCAF11-214ENST00000550893 THBS1P07996 1170 aa8.61□□□□□ -1.03
SCAF11-214ENST00000550893 MSX1P28360 303 aa8.61□□□□□ -1.03
SCAF11-214ENST00000550893 PLA2G4AP47712 749 aa8.61□□□□□ -1.03
SCAF11-214ENST00000550893 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
SCAF11-214ENST00000550893 ZNF295-AS1Q8N0V1 137 aa8.61□□□□□ -1.03
SCAF11-214ENST00000550893 OGFOD1Q8N543 542 aa8.61□□□□□ -1.03
SCAF11-214ENST00000550893 TPCN2Q8NHX9 752 aa8.61□□□□□ -1.03
SCAF11-214ENST00000550893 GTPBP3Q969Y2 492 aaKnown RBP8.61□□□□□ -1.03
SCAF11-214ENST00000550893 LOC100996750A0A140TA64 210 aa8.6□□□□□ -1.03
SCAF11-214ENST00000550893 GAS6Q14393 721 aa8.6□□□□□ -1.03
SCAF11-214ENST00000550893 NIFKQ9BYG3 293 aaKnown RBP8.6□□□□□ -1.03
SCAF11-214ENST00000550893 KRTAP4-6Q9BYQ5 205 aa8.6□□□□□ -1.03
SCAF11-214ENST00000550893 NUCKS1Q9H1E3 243 aaKnown RBP8.6□□□□□ -1.03
SCAF11-214ENST00000550893 LARGE2Q8N3Y3 721 aa8.59□□□□□ -1.03
SCAF11-214ENST00000550893 RUBCNLQ9H714 662 aa8.59□□□□□ -1.03
SCAF11-214ENST00000550893 EPHA4P54764 986 aa8.58□□□□□ -1.04
SCAF11-214ENST00000550893 FOXR1Q6PIV2 292 aa8.58□□□□□ -1.04
SCAF11-214ENST00000550893 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
SCAF11-214ENST00000550893 AIDAQ96BJ3 306 aa8.58□□□□□ -1.04
SCAF11-214ENST00000550893 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
SCAF11-214ENST00000550893 ZMYND15Q9H091 742 aa8.58□□□□□ -1.04
SCAF11-214ENST00000550893 CABP1Q9NZU7 370 aa8.58□□□□□ -1.04
SCAF11-214ENST00000550893 SCHIP1Q9P0W5 487 aaPredicted RBP8.58□□□□□ -1.04
SCAF11-214ENST00000550893 DKK1O94907 266 aa8.57□□□□□ -1.04
SCAF11-214ENST00000550893 RASA1P20936 1047 aa8.57□□□□□ -1.04
SCAF11-214ENST00000550893 LMOD1P29536 600 aaPredicted RBP8.57□□□□□ -1.04
SCAF11-214ENST00000550893 FOXK2Q01167 660 aa8.57□□□□□ -1.04
SCAF11-214ENST00000550893 KANK4Q5T7N3 995 aaPredicted RBP8.57□□□□□ -1.04
SCAF11-214ENST00000550893 SIX5Q8N196 739 aa8.57□□□□□ -1.04
SCAF11-214ENST00000550893 IGF1RP08069 1367 aa8.57□□□□□ -1.04
SCAF11-214ENST00000550893 KIF13AQ9H1H9 1805 aa8.57□□□□□ -1.04
SCAF11-214ENST00000550893 CSB-PGBD3P0DP91 1061 aa8.56□□□□□ -1.04
SCAF11-214ENST00000550893 ATP4AP20648 1035 aa8.56□□□□□ -1.04
SCAF11-214ENST00000550893 TBCELQ5QJ74 424 aa8.56□□□□□ -1.04
SCAF11-214ENST00000550893 PGBD3Q8N328 593 aa8.56□□□□□ -1.04
SCAF11-214ENST00000550893 PARP3Q9Y6F1 533 aa8.56□□□□□ -1.04
SCAF11-214ENST00000550893 SFI1A8K8P3 1242 aa8.55□□□□□ -1.04
SCAF11-214ENST00000550893 SLURP2P0DP57 97 aa8.55□□□□□ -1.04
SCAF11-214ENST00000550893 UBAP2LQ14157 1087 aaKnown RBP8.55□□□□□ -1.04
SCAF11-214ENST00000550893 CFAP70Q5T0N1 1121 aa8.55□□□□□ -1.04
SCAF11-214ENST00000550893 ZDHHC1Q8WTX9 485 aa8.55□□□□□ -1.04
SCAF11-214ENST00000550893 TRERF1Q96PN7 1200 aa8.55□□□□□ -1.04
SCAF11-214ENST00000550893 CRISPLD1Q9H336 500 aa8.55□□□□□ -1.04
SCAF11-214ENST00000550893 ADCY10Q96PN6 1610 aa8.54□□□□□ -1.04
SCAF11-214ENST00000550893 ADAMTS2O95450 1211 aa8.54□□□□□ -1.04
SCAF11-214ENST00000550893 SRSF11Q05519 484 aaKnown RBP8.54□□□□□ -1.04
SCAF11-214ENST00000550893 LBRQ14739 615 aaKnown RBP8.54□□□□□ -1.04
SCAF11-214ENST00000550893 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
SCAF11-214ENST00000550893 EFHC2Q5JST6 749 aa8.54□□□□□ -1.04
SCAF11-214ENST00000550893 SLC9A9Q8IVB4 645 aa8.54□□□□□ -1.04
SCAF11-214ENST00000550893 C1orf216Q8TAB5 229 aa8.54□□□□□ -1.04
SCAF11-214ENST00000550893 MBIPQ9NS73 344 aa8.54□□□□□ -1.04
SCAF11-214ENST00000550893 CTTNBP2Q8WZ74 1663 aa8.53□□□□□ -1.04
SCAF11-214ENST00000550893 M0R2N6 131 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms