RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 DCTN1Q14203 1278 aa15.77■□□□□ 0.12
ERBB3-216ENST00000550869 C1orf141Q5JVX7 400 aa15.77■□□□□ 0.12
ERBB3-216ENST00000550869 MCM10Q7L590 875 aa15.77■□□□□ 0.12
ERBB3-216ENST00000550869 THUMPD2Q9BTF0 503 aaKnown RBP15.77■□□□□ 0.12
ERBB3-216ENST00000550869 SCN11AQ9UI33 1791 aa15.77■□□□□ 0.11
ERBB3-216ENST00000550869 CICQ96RK0 1608 aaPredicted RBP15.76■□□□□ 0.11
ERBB3-216ENST00000550869 RNMTO43148 476 aaKnown RBP15.76■□□□□ 0.11
ERBB3-216ENST00000550869 RC3H1Q5TC82 1133 aaKnown RBP15.76■□□□□ 0.11
ERBB3-216ENST00000550869 RTF1Q92541 710 aaKnown RBP15.76■□□□□ 0.11
ERBB3-216ENST00000550869 LGR6Q9HBX8 967 aa15.76■□□□□ 0.11
ERBB3-216ENST00000550869 RTCBQ9Y3I0 505 aaKnown RBP15.76■□□□□ 0.11
ERBB3-216ENST00000550869 KDM6AO15550 1401 aaPredicted RBP15.76■□□□□ 0.11
ERBB3-216ENST00000550869 ATP10DQ9P241 1426 aa15.76■□□□□ 0.11
ERBB3-216ENST00000550869 ADCY9O60503 1353 aa15.75■□□□□ 0.11
ERBB3-216ENST00000550869 CHL1O00533 1208 aa15.75■□□□□ 0.11
ERBB3-216ENST00000550869 TRAPPC3LQ5T215 181 aa15.75■□□□□ 0.11
ERBB3-216ENST00000550869 CFAP44Q96MT7 982 aa15.75■□□□□ 0.11
ERBB3-216ENST00000550869 IFT57Q9NWB7 429 aa15.75■□□□□ 0.11
ERBB3-216ENST00000550869 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
ERBB3-216ENST00000550869 CNTNAP4Q9C0A0 1308 aa15.74■□□□□ 0.11
ERBB3-216ENST00000550869 CENPBP07199 599 aaPredicted RBP15.74■□□□□ 0.11
ERBB3-216ENST00000550869 NLGN1Q8N2Q7 840 aa15.74■□□□□ 0.11
ERBB3-216ENST00000550869 SIPA1L3O60292 1781 aaPredicted RBP15.73■□□□□ 0.11
ERBB3-216ENST00000550869 CABP4P57796 275 aa15.73■□□□□ 0.11
ERBB3-216ENST00000550869 GNAI1P63096 354 aa15.73■□□□□ 0.11
ERBB3-216ENST00000550869 C4AP0C0L4 1744 aa15.73■□□□□ 0.11
ERBB3-216ENST00000550869 KIAA1551Q9HCM1 1747 aa15.73■□□□□ 0.11
ERBB3-216ENST00000550869 MRC1P22897 1456 aa15.72■□□□□ 0.11
ERBB3-216ENST00000550869 MMP10P09238 476 aa15.72■□□□□ 0.11
ERBB3-216ENST00000550869 SMIM5Q71RC9 77 aa15.72■□□□□ 0.11
ERBB3-216ENST00000550869 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
ERBB3-216ENST00000550869 MYH16Q9H6N6 1097 aa15.72■□□□□ 0.11
ERBB3-216ENST00000550869 GPBP1L1Q9HC44 474 aaPredicted RBP15.72■□□□□ 0.11
ERBB3-216ENST00000550869 MYH14Q7Z406 1995 aaKnown RBP15.71■□□□□ 0.11
ERBB3-216ENST00000550869 C10orf71Q711Q0 1435 aa15.71■□□□□ 0.11
ERBB3-216ENST00000550869 TGFB2P61812 414 aa15.71■□□□□ 0.11
ERBB3-216ENST00000550869 TAF7Q15545 349 aaPredicted RBP15.71■□□□□ 0.11
ERBB3-216ENST00000550869 SLC4A9Q96Q91 983 aa15.71■□□□□ 0.11
ERBB3-216ENST00000550869 FANCIQ9NVI1 1328 aa15.7■□□□□ 0.1
ERBB3-216ENST00000550869 RPS6KA4O75676 772 aa15.7■□□□□ 0.1
ERBB3-216ENST00000550869 RFC4P35249 363 aa15.7■□□□□ 0.1
ERBB3-216ENST00000550869 MBIPQ9NS73 344 aa15.7■□□□□ 0.1
ERBB3-216ENST00000550869 PXDNLA1KZ92 1463 aa15.7■□□□□ 0.1
ERBB3-216ENST00000550869 N4BP2Q86UW6 1770 aaPredicted RBP15.7■□□□□ 0.1
ERBB3-216ENST00000550869 ARHGEF1Q92888 912 aaKnown RBP15.69■□□□□ 0.1
ERBB3-216ENST00000550869 SLC52A2Q9HAB3 445 aa15.69■□□□□ 0.1
ERBB3-216ENST00000550869 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
ERBB3-216ENST00000550869 TJP1Q07157 1748 aa15.68■□□□□ 0.1
ERBB3-216ENST00000550869 TSR2Q969E8 191 aaKnown RBP15.68■□□□□ 0.1
ERBB3-216ENST00000550869 CCDC87Q9NVE4 849 aa15.68■□□□□ 0.1
ERBB3-216ENST00000550869 KDM3BQ7LBC6 1761 aa15.67■□□□□ 0.1
ERBB3-216ENST00000550869 GYS1P13807 737 aa15.67■□□□□ 0.1
ERBB3-216ENST00000550869 NFATC2IPQ8NCF5 419 aa15.67■□□□□ 0.1
ERBB3-216ENST00000550869 ARFGEF1Q9Y6D6 1849 aa15.66■□□□□ 0.1
ERBB3-216ENST00000550869 PTCD1O75127 700 aaKnown RBP15.66■□□□□ 0.1
ERBB3-216ENST00000550869 CT47B1P0C2W7 299 aaPredicted RBP15.66■□□□□ 0.1
ERBB3-216ENST00000550869 TEFQ10587 303 aa15.66■□□□□ 0.1
ERBB3-216ENST00000550869 PARP3Q9Y6F1 533 aa15.66■□□□□ 0.1
ERBB3-216ENST00000550869 TSPYL4Q9UJ04 414 aa15.65■□□□□ 0.1
ERBB3-216ENST00000550869 LAS1LQ9Y4W2 734 aaKnown RBP15.65■□□□□ 0.1
ERBB3-216ENST00000550869 HEG1Q9ULI3 1381 aa15.64■□□□□ 0.09
ERBB3-216ENST00000550869 CRKLP46109 303 aaKnown RBP15.64■□□□□ 0.09
ERBB3-216ENST00000550869 EXOSC9Q06265 439 aaKnown RBP15.64■□□□□ 0.09
ERBB3-216ENST00000550869 MIS18AQ9NYP9 233 aa15.64■□□□□ 0.09
ERBB3-216ENST00000550869 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
ERBB3-216ENST00000550869 BTBD11A6QL63 1104 aa15.63■□□□□ 0.09
ERBB3-216ENST00000550869 WWC3Q9ULE0 1092 aa15.63■□□□□ 0.09
ERBB3-216ENST00000550869 KCNQ3O43525 872 aa15.62■□□□□ 0.09
ERBB3-216ENST00000550869 VAMP4O75379 141 aa15.62■□□□□ 0.09
ERBB3-216ENST00000550869 EIF4A1P60842 406 aaKnown RBP15.62■□□□□ 0.09
ERBB3-216ENST00000550869 TSPYL6Q8N831 410 aa15.62■□□□□ 0.09
ERBB3-216ENST00000550869 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
ERBB3-216ENST00000550869 ZNF526Q8TF50 670 aaPredicted RBP15.62■□□□□ 0.09
ERBB3-216ENST00000550869 ZNF428Q96B54 188 aa15.62■□□□□ 0.09
ERBB3-216ENST00000550869 BCS1LQ9Y276 419 aa15.62■□□□□ 0.09
ERBB3-216ENST00000550869 SOS1Q07889 1333 aaPredicted RBP15.62■□□□□ 0.09
ERBB3-216ENST00000550869 A0A0G2JLW4 131 aa15.61■□□□□ 0.09
ERBB3-216ENST00000550869 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
ERBB3-216ENST00000550869 RNF123Q5XPI4 1314 aa15.61■□□□□ 0.09
ERBB3-216ENST00000550869 UBR2Q8IWV8 1755 aa15.6■□□□□ 0.09
ERBB3-216ENST00000550869 DPEP1P16444 411 aa15.6■□□□□ 0.09
ERBB3-216ENST00000550869 HSPA6P17066 643 aa15.6■□□□□ 0.09
ERBB3-216ENST00000550869 RCAN3Q9UKA8 241 aa15.6■□□□□ 0.09
ERBB3-216ENST00000550869 KCPQ6ZWJ8 1503 aa15.59■□□□□ 0.09
ERBB3-216ENST00000550869 HOXB7P09629 217 aa15.59■□□□□ 0.09
ERBB3-216ENST00000550869 KRT24Q2M2I5 525 aa15.59■□□□□ 0.09
ERBB3-216ENST00000550869 INTS5Q6P9B9 1019 aaKnown RBP15.59■□□□□ 0.09
ERBB3-216ENST00000550869 KIF3CO14782 793 aa15.58■□□□□ 0.08
ERBB3-216ENST00000550869 ZPR1O75312 459 aa15.58■□□□□ 0.08
ERBB3-216ENST00000550869 RARSP54136 660 aaKnown RBP15.58■□□□□ 0.08
ERBB3-216ENST00000550869 BRPF1P55201 1214 aaPredicted RBP15.58■□□□□ 0.08
ERBB3-216ENST00000550869 SLC39A6Q13433 755 aa15.58■□□□□ 0.08
ERBB3-216ENST00000550869 FKBP8Q14318 412 aa15.58■□□□□ 0.08
ERBB3-216ENST00000550869 TWISTNBQ3B726 338 aaPredicted RBP15.58■□□□□ 0.08
ERBB3-216ENST00000550869 ARHGAP27Q6ZUM4 889 aa15.58■□□□□ 0.08
ERBB3-216ENST00000550869 VSIG10Q8N0Z9 540 aa15.58■□□□□ 0.08
ERBB3-216ENST00000550869 PIM2Q9P1W9 311 aa15.58■□□□□ 0.08
ERBB3-216ENST00000550869 SRP68Q9UHB9 627 aaKnown RBP15.58■□□□□ 0.08
ERBB3-216ENST00000550869 NRXN2Q9P2S2 1712 aa15.57■□□□□ 0.08
ERBB3-216ENST00000550869 KCNA3P22001 575 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms