RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-206ENST00000550558 SNX21Q969T3 373 aa20.27■□□□□ 0.84
ASIC1-206ENST00000550558 DDX11Q96FC9 970 aa20.27■□□□□ 0.84
ASIC1-206ENST00000550558 USP44Q9H0E7 712 aa20.27■□□□□ 0.84
ASIC1-206ENST00000550558 CYP46A1Q9Y6A2 500 aa20.27■□□□□ 0.84
ASIC1-206ENST00000550558 PTPRMP28827 1452 aa20.27■□□□□ 0.84
ASIC1-206ENST00000550558 FKBP4Q02790 459 aaKnown RBP eCLIP20.27■□□□□ 0.84
ASIC1-206ENST00000550558 NECAB1Q8N987 351 aa20.27■□□□□ 0.84
ASIC1-206ENST00000550558 BICD2Q8TD16 824 aa20.27■□□□□ 0.84
ASIC1-206ENST00000550558 IP6K1Q92551 441 aa20.27■□□□□ 0.84
ASIC1-206ENST00000550558 A0A087WZG4 1122 aa20.27■□□□□ 0.83
ASIC1-206ENST00000550558 AMOTQ4VCS5 1084 aa20.26■□□□□ 0.83
ASIC1-206ENST00000550558 ANTXR1Q9H6X2 564 aa20.26■□□□□ 0.83
ASIC1-206ENST00000550558 CFAP74Q9C0B2 1584 aa20.26■□□□□ 0.83
ASIC1-206ENST00000550558 NEXMIFQ5QGS0 1516 aa20.26■□□□□ 0.83
ASIC1-206ENST00000550558 UNC5CLQ8IV45 518 aa20.26■□□□□ 0.83
ASIC1-206ENST00000550558 PDRG1Q9NUG6 133 aa20.26■□□□□ 0.83
ASIC1-206ENST00000550558 DIP2CQ9Y2E4 1556 aa20.25■□□□□ 0.83
ASIC1-206ENST00000550558 CHMLP26374 656 aa20.25■□□□□ 0.83
ASIC1-206ENST00000550558 FAM43AQ8N2R8 423 aa20.25■□□□□ 0.83
ASIC1-206ENST00000550558 PALD1Q9ULE6 856 aa20.25■□□□□ 0.83
ASIC1-206ENST00000550558 MCM2P49736 904 aa20.24■□□□□ 0.83
ASIC1-206ENST00000550558 KIAA2012Q0VF49 1180 aa20.24■□□□□ 0.83
ASIC1-206ENST00000550558 RAB3GAP1Q15042 981 aa20.24■□□□□ 0.83
ASIC1-206ENST00000550558 ATP6V1DQ9Y5K8 247 aa20.24■□□□□ 0.83
ASIC1-206ENST00000550558 LRRC7Q96NW7 1537 aa20.24■□□□□ 0.83
ASIC1-206ENST00000550558 PROSER3Q2NL68 480 aa20.24■□□□□ 0.83
ASIC1-206ENST00000550558 SNRKQ9NRH2 765 aa20.24■□□□□ 0.83
ASIC1-206ENST00000550558 ECHDC1Q9NTX5 307 aa20.24■□□□□ 0.83
ASIC1-206ENST00000550558 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.24■□□□□ 0.83
ASIC1-206ENST00000550558 LMTK2Q8IWU2 1503 aa20.24■□□□□ 0.83
ASIC1-206ENST00000550558 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
ASIC1-206ENST00000550558 NCBP3Q53F19 620 aaKnown RBP20.23■□□□□ 0.83
ASIC1-206ENST00000550558 ESPNB1AK53 854 aa20.23■□□□□ 0.83
ASIC1-206ENST00000550558 RAB11FIP3O75154 756 aa20.23■□□□□ 0.83
ASIC1-206ENST00000550558 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
ASIC1-206ENST00000550558 LRRC2Q9BYS8 371 aa20.23■□□□□ 0.83
ASIC1-206ENST00000550558 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
ASIC1-206ENST00000550558 USP6P35125 1406 aa20.22■□□□□ 0.83
ASIC1-206ENST00000550558 PNPLA6Q8IY17 1366 aa20.22■□□□□ 0.83
ASIC1-206ENST00000550558 SF3A1Q15459 793 aaKnown RBP20.22■□□□□ 0.83
ASIC1-206ENST00000550558 LARP1BQ659C4 914 aaKnown RBP20.22■□□□□ 0.83
ASIC1-206ENST00000550558 LARP1Q6PKG0 1096 aaKnown RBP20.22■□□□□ 0.83
ASIC1-206ENST00000550558 FRMPD1Q5SYB0 1578 aa20.22■□□□□ 0.83
ASIC1-206ENST00000550558 GTF2E1P29083 439 aaPredicted RBP20.22■□□□□ 0.83
ASIC1-206ENST00000550558 ATP7BP35670 1465 aa20.22■□□□□ 0.83
ASIC1-206ENST00000550558 PHF14O94880 888 aa20.22■□□□□ 0.83
ASIC1-206ENST00000550558 BLOC1S2Q6QNY1 142 aa20.22■□□□□ 0.83
ASIC1-206ENST00000550558 MROH1Q8NDA8 1641 aa20.21■□□□□ 0.83
ASIC1-206ENST00000550558 AATKQ6ZMQ8 1374 aa20.21■□□□□ 0.83
ASIC1-206ENST00000550558 ARHGEF40Q8TER5 1519 aa20.21■□□□□ 0.83
ASIC1-206ENST00000550558 DDX46Q7L014 1031 aaKnown RBP20.21■□□□□ 0.83
ASIC1-206ENST00000550558 SOS1Q07889 1333 aaPredicted RBP20.21■□□□□ 0.83
ASIC1-206ENST00000550558 RNMTO43148 476 aaKnown RBP20.21■□□□□ 0.83
ASIC1-206ENST00000550558 SETBP1Q9Y6X0 1596 aa20.21■□□□□ 0.83
ASIC1-206ENST00000550558 GPTP24298 496 aa20.2■□□□□ 0.82
ASIC1-206ENST00000550558 EDC3Q96F86 508 aaKnown RBP20.2■□□□□ 0.82
ASIC1-206ENST00000550558 NRXN1Q9ULB1 1477 aa20.2■□□□□ 0.82
ASIC1-206ENST00000550558 GRM8O00222 908 aa20.2■□□□□ 0.82
ASIC1-206ENST00000550558 EIF4A1P60842 406 aaKnown RBP20.2■□□□□ 0.82
ASIC1-206ENST00000550558 TFIP11Q9UBB9 837 aaKnown RBP20.2■□□□□ 0.82
ASIC1-206ENST00000550558 WDR33Q9C0J8 1336 aaKnown RBP20.19■□□□□ 0.82
ASIC1-206ENST00000550558 ANKRD13DQ6ZTN6 518 aa20.19■□□□□ 0.82
ASIC1-206ENST00000550558 HYPKQ9NX55 129 aa20.19■□□□□ 0.82
ASIC1-206ENST00000550558 PIK3C2BO00750 1634 aa20.19■□□□□ 0.82
ASIC1-206ENST00000550558 KSR2Q6VAB6 950 aa20.19■□□□□ 0.82
ASIC1-206ENST00000550558 BICC1Q9H694 974 aaKnown RBP20.19■□□□□ 0.82
ASIC1-206ENST00000550558 R3HCC1Q9Y3T6 440 aaKnown RBP20.19■□□□□ 0.82
ASIC1-206ENST00000550558 CAMK4Q16566 473 aa20.19■□□□□ 0.82
ASIC1-206ENST00000550558 SPC24Q8NBT2 197 aa20.18■□□□□ 0.82
ASIC1-206ENST00000550558 RAB11FIP4Q86YS3 637 aa20.18■□□□□ 0.82
ASIC1-206ENST00000550558 VWDEQ8N2E2 1590 aa20.18■□□□□ 0.82
ASIC1-206ENST00000550558 CPS1P31327 1500 aa20.18■□□□□ 0.82
ASIC1-206ENST00000550558 MBD3O95983 291 aa20.18■□□□□ 0.82
ASIC1-206ENST00000550558 GUCY1B3Q02153 619 aa20.17■□□□□ 0.82
ASIC1-206ENST00000550558 HTATSF1O43719 755 aaKnown RBP20.16■□□□□ 0.82
ASIC1-206ENST00000550558 IFNL2Q8IZJ0 200 aa20.16■□□□□ 0.82
ASIC1-206ENST00000550558 CHMP4CQ96CF2 233 aa20.16■□□□□ 0.82
ASIC1-206ENST00000550558 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
ASIC1-206ENST00000550558 IQSEC2Q5JU85 1478 aa20.16■□□□□ 0.82
ASIC1-206ENST00000550558 CPLX1O14810 134 aa20.16■□□□□ 0.82
ASIC1-206ENST00000550558 PSMA5P28066 241 aa20.16■□□□□ 0.82
ASIC1-206ENST00000550558 CSPP1Q1MSJ5 1256 aa20.16■□□□□ 0.82
ASIC1-206ENST00000550558 ZSCAN23Q3MJ62 389 aa20.16■□□□□ 0.82
ASIC1-206ENST00000550558 TSPY26PQ9H489 355 aa20.16■□□□□ 0.82
ASIC1-206ENST00000550558 IGSF1Q8N6C5 1336 aa20.16■□□□□ 0.82
ASIC1-206ENST00000550558 GOLIM4O00461 696 aa20.15■□□□□ 0.82
ASIC1-206ENST00000550558 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
ASIC1-206ENST00000550558 LMBR1LQ6UX01 489 aa20.15■□□□□ 0.82
ASIC1-206ENST00000550558 GAS2L3Q86XJ1 694 aa20.15■□□□□ 0.82
ASIC1-206ENST00000550558 FAM13BQ9NYF5 915 aa20.15■□□□□ 0.82
ASIC1-206ENST00000550558 RRAGDQ9NQL2 400 aaPredicted RBP20.15■□□□□ 0.82
ASIC1-206ENST00000550558 LIMCH1Q9UPQ0 1083 aa20.15■□□□□ 0.82
ASIC1-206ENST00000550558 KLHL40Q2TBA0 621 aa20.14■□□□□ 0.81
ASIC1-206ENST00000550558 ZNF496Q96IT1 587 aaPredicted RBP20.14■□□□□ 0.81
ASIC1-206ENST00000550558 FAM227BQ96M60 508 aa20.14■□□□□ 0.81
ASIC1-206ENST00000550558 FMNL2Q96PY5 1086 aa20.14■□□□□ 0.81
ASIC1-206ENST00000550558 KIAA0232Q92628 1395 aa20.14■□□□□ 0.81
ASIC1-206ENST00000550558 NUTM2BA6NNL0 878 aaPredicted RBP20.14■□□□□ 0.81
ASIC1-206ENST00000550558 NUTM2EB1AL46 878 aaPredicted RBP20.14■□□□□ 0.81
ASIC1-206ENST00000550558 AK2P54819 239 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms