RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 PHKG2P15735 406 aa9.37□□□□□ -0.91
CBX5-204ENST00000550411 ATP6V1AP38606 617 aa9.37□□□□□ -0.91
CBX5-204ENST00000550411 AEBP1Q8IUX7 1158 aa9.37□□□□□ -0.91
CBX5-204ENST00000550411 LINC00116Q8NCU8 138 aa9.37□□□□□ -0.91
CBX5-204ENST00000550411 KDM6AO15550 1401 aaPredicted RBP9.37□□□□□ -0.91
CBX5-204ENST00000550411 GNPATO15228 680 aa9.36□□□□□ -0.91
CBX5-204ENST00000550411 ITPK1Q13572 414 aa9.36□□□□□ -0.91
CBX5-204ENST00000550411 CC2D1BQ5T0F9 858 aaKnown RBP9.36□□□□□ -0.91
CBX5-204ENST00000550411 WWC3Q9ULE0 1092 aa9.36□□□□□ -0.91
CBX5-204ENST00000550411 ASAP1Q9ULH1 1129 aa9.36□□□□□ -0.91
CBX5-204ENST00000550411 PXDNLA1KZ92 1463 aa9.35□□□□□ -0.91
CBX5-204ENST00000550411 IL13P35225 146 aa9.35□□□□□ -0.91
CBX5-204ENST00000550411 ZNF526Q8TF50 670 aaPredicted RBP9.35□□□□□ -0.91
CBX5-204ENST00000550411 MTHFSP49914 203 aa9.34□□□□□ -0.91
CBX5-204ENST00000550411 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
CBX5-204ENST00000550411 BCORQ6W2J9 1755 aa9.34□□□□□ -0.91
CBX5-204ENST00000550411 MRC1P22897 1456 aa9.34□□□□□ -0.91
CBX5-204ENST00000550411 NUP98P52948 1817 aa9.33□□□□□ -0.92
CBX5-204ENST00000550411 C10orf71Q711Q0 1435 aa9.33□□□□□ -0.92
CBX5-204ENST00000550411 MMP10P09238 476 aa9.33□□□□□ -0.92
CBX5-204ENST00000550411 HSPA6P17066 643 aa9.33□□□□□ -0.92
CBX5-204ENST00000550411 NUBP1P53384 320 aa9.33□□□□□ -0.92
CBX5-204ENST00000550411 TRAPPC3LQ5T215 181 aa9.33□□□□□ -0.92
CBX5-204ENST00000550411 RBM42Q9BTD8 480 aaKnown RBP9.33□□□□□ -0.92
CBX5-204ENST00000550411 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
CBX5-204ENST00000550411 COL11A2P13942 1736 aaPredicted RBP9.32□□□□□ -0.92
CBX5-204ENST00000550411 ERVV-2B6SEH9 535 aa9.32□□□□□ -0.92
CBX5-204ENST00000550411 HSP90AB1P08238 724 aaKnown RBP9.32□□□□□ -0.92
CBX5-204ENST00000550411 GSE1Q14687 1217 aa9.32□□□□□ -0.92
CBX5-204ENST00000550411 IFFO2Q5TF58 517 aa9.32□□□□□ -0.92
CBX5-204ENST00000550411 NLGN1Q8N2Q7 840 aa9.32□□□□□ -0.92
CBX5-204ENST00000550411 SCN7AQ01118 1682 aa9.32□□□□□ -0.92
CBX5-204ENST00000550411 CNTNAP4Q9C0A0 1308 aa9.31□□□□□ -0.92
CBX5-204ENST00000550411 GTPBP6O43824 516 aaPredicted RBP9.31□□□□□ -0.92
CBX5-204ENST00000550411 TGFB2P61812 414 aa9.31□□□□□ -0.92
CBX5-204ENST00000550411 PLEKHO1Q53GL0 409 aaPredicted RBP9.31□□□□□ -0.92
CBX5-204ENST00000550411 RC3H1Q5TC82 1133 aaKnown RBP9.31□□□□□ -0.92
CBX5-204ENST00000550411 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
CBX5-204ENST00000550411 DCAF5Q96JK2 942 aa9.31□□□□□ -0.92
CBX5-204ENST00000550411 SLC4A9Q96Q91 983 aa9.31□□□□□ -0.92
CBX5-204ENST00000550411 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
CBX5-204ENST00000550411 KIF3CO14782 793 aa9.3□□□□□ -0.92
CBX5-204ENST00000550411 RPS6KA4O75676 772 aa9.3□□□□□ -0.92
CBX5-204ENST00000550411 RFC4P35249 363 aa9.3□□□□□ -0.92
CBX5-204ENST00000550411 CNGB1Q14028 1251 aaPredicted RBP9.3□□□□□ -0.92
CBX5-204ENST00000550411 SULT6B1Q6IMI4 303 aa9.3□□□□□ -0.92
CBX5-204ENST00000550411 CCDC87Q9NVE4 849 aa9.3□□□□□ -0.92
CBX5-204ENST00000550411 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
CBX5-204ENST00000550411 SLX4Q8IY92 1834 aa9.3□□□□□ -0.92
CBX5-204ENST00000550411 SCN4AP35499 1836 aa9.29□□□□□ -0.92
CBX5-204ENST00000550411 A0A0G2JLW4 131 aa9.29□□□□□ -0.92
CBX5-204ENST00000550411 GYS1P13807 737 aa9.29□□□□□ -0.92
CBX5-204ENST00000550411 CABP4P57796 275 aa9.29□□□□□ -0.92
CBX5-204ENST00000550411 AMOTQ4VCS5 1084 aa9.29□□□□□ -0.92
CBX5-204ENST00000550411 ZNF530Q6P9A1 599 aaPredicted RBP9.29□□□□□ -0.92
CBX5-204ENST00000550411 PARP3Q9Y6F1 533 aa9.29□□□□□ -0.92
CBX5-204ENST00000550411 TRPM7Q96QT4 1865 aa9.28□□□□□ -0.92
CBX5-204ENST00000550411 KCPQ6ZWJ8 1503 aa9.28□□□□□ -0.92
CBX5-204ENST00000550411 FCHSD2O94868 740 aa9.28□□□□□ -0.92
CBX5-204ENST00000550411 HMOX1P09601 288 aa9.28□□□□□ -0.92
CBX5-204ENST00000550411 PPP2R1AP30153 589 aa9.28□□□□□ -0.92
CBX5-204ENST00000550411 C1orf141Q5JVX7 400 aa9.28□□□□□ -0.92
CBX5-204ENST00000550411 ARHGAP27Q6ZUM4 889 aa9.28□□□□□ -0.92
CBX5-204ENST00000550411 LAMB4A4D0S4 1761 aa9.27□□□□□ -0.92
CBX5-204ENST00000550411 DIAPH1O60610 1272 aaKnown RBP9.27□□□□□ -0.93
CBX5-204ENST00000550411 PTCD1O75127 700 aaKnown RBP9.27□□□□□ -0.93
CBX5-204ENST00000550411 DPEP1P16444 411 aa9.27□□□□□ -0.93
CBX5-204ENST00000550411 TOMM70O94826 608 aa9.26□□□□□ -0.93
CBX5-204ENST00000550411 CRKLP46109 303 aaKnown RBP9.26□□□□□ -0.93
CBX5-204ENST00000550411 NFATC2IPQ8NCF5 419 aa9.26□□□□□ -0.93
CBX5-204ENST00000550411 POLR2AP24928 1970 aaKnown RBP9.26□□□□□ -0.93
CBX5-204ENST00000550411 KCNA3P22001 575 aa9.25□□□□□ -0.93
CBX5-204ENST00000550411 APLP1P51693 650 aa9.25□□□□□ -0.93
CBX5-204ENST00000550411 RSPH6AQ9H0K4 717 aa9.25□□□□□ -0.93
CBX5-204ENST00000550411 PIM2Q9P1W9 311 aa9.25□□□□□ -0.93
CBX5-204ENST00000550411 SRP68Q9UHB9 627 aaKnown RBP9.25□□□□□ -0.93
CBX5-204ENST00000550411 USP42Q9H9J4 1324 aaKnown RBP9.25□□□□□ -0.93
CBX5-204ENST00000550411 MTHFSDQ2M296 383 aaKnown RBP9.24□□□□□ -0.93
CBX5-204ENST00000550411 NMRK2Q9NPI5 230 aa9.24□□□□□ -0.93
CBX5-204ENST00000550411 STK25O00506 426 aa9.23□□□□□ -0.93
CBX5-204ENST00000550411 U2SURPO15042 1029 aaKnown RBP9.23□□□□□ -0.93
CBX5-204ENST00000550411 DDR1Q08345 913 aa9.23□□□□□ -0.93
CBX5-204ENST00000550411 DALRD3Q5D0E6 543 aaKnown RBP9.23□□□□□ -0.93
CBX5-204ENST00000550411 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
CBX5-204ENST00000550411 C9orf131Q5VYM1 1079 aa9.23□□□□□ -0.93
CBX5-204ENST00000550411 C16orf71Q8IYS4 520 aaPredicted RBP9.23□□□□□ -0.93
CBX5-204ENST00000550411 LGR6Q9HBX8 967 aa9.23□□□□□ -0.93
CBX5-204ENST00000550411 ANKRD36CQ5JPF3 1778 aa9.22□□□□□ -0.93
CBX5-204ENST00000550411 KDM3BQ7LBC6 1761 aa9.22□□□□□ -0.93
CBX5-204ENST00000550411 POLRMTO00411 1230 aaKnown RBP9.22□□□□□ -0.93
CBX5-204ENST00000550411 RNMTO43148 476 aaKnown RBP9.22□□□□□ -0.93
CBX5-204ENST00000550411 ZPR1O75312 459 aa9.22□□□□□ -0.93
CBX5-204ENST00000550411 TM4SF1P30408 202 aa9.22□□□□□ -0.93
CBX5-204ENST00000550411 USPL1Q5W0Q7 1092 aa9.22□□□□□ -0.93
CBX5-204ENST00000550411 INTS5Q6P9B9 1019 aaKnown RBP9.22□□□□□ -0.93
CBX5-204ENST00000550411 DNAJC10Q8IXB1 793 aa9.22□□□□□ -0.93
CBX5-204ENST00000550411 RBM46Q8TBY0 533 aaKnown RBP9.22□□□□□ -0.93
CBX5-204ENST00000550411 PHACTR3Q96KR7 559 aa9.22□□□□□ -0.93
CBX5-204ENST00000550411 SLC52A2Q9HAB3 445 aa9.22□□□□□ -0.93
CBX5-204ENST00000550411 RNF181Q9P0P0 153 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms