RNA–Protein interactions for RNA: ENST00000550314.5

VDR-207, Transcript of vitamin D receptor, humanhuman

TSL 3

Gene VDR, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-207ENST00000550314 C5P01031 1676 aa17.36■□□□□ 0.37
VDR-207ENST00000550314 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
VDR-207ENST00000550314 SSFA2P28290 1259 aa17.35■□□□□ 0.37
VDR-207ENST00000550314 SOS1Q07889 1333 aaPredicted RBP17.35■□□□□ 0.37
VDR-207ENST00000550314 PRAMEF22A3QJZ6 481 aa17.34■□□□□ 0.37
VDR-207ENST00000550314 MSH5O43196 834 aa17.34■□□□□ 0.37
VDR-207ENST00000550314 C4BP0C0L5 1744 aa17.34■□□□□ 0.37
VDR-207ENST00000550314 ADRA2BP18089 450 aa17.34■□□□□ 0.37
VDR-207ENST00000550314 TRAPPC3LQ5T215 181 aa17.34■□□□□ 0.37
VDR-207ENST00000550314 DUSP27Q5VZP5 1158 aa17.34■□□□□ 0.37
VDR-207ENST00000550314 FANCIQ9NVI1 1328 aa17.34■□□□□ 0.37
VDR-207ENST00000550314 CICQ96RK0 1608 aaPredicted RBP17.33■□□□□ 0.37
VDR-207ENST00000550314 PSDA5PKW4 1024 aaPredicted RBP17.33■□□□□ 0.36
VDR-207ENST00000550314 EIF2S2P20042 333 aaKnown RBP17.33■□□□□ 0.36
VDR-207ENST00000550314 CANXP27824 592 aaKnown RBP17.33■□□□□ 0.36
VDR-207ENST00000550314 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.36
VDR-207ENST00000550314 ERBB4Q15303 1308 aa17.32■□□□□ 0.36
VDR-207ENST00000550314 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.32■□□□□ 0.36
VDR-207ENST00000550314 PHF14O94880 888 aa17.32■□□□□ 0.36
VDR-207ENST00000550314 A1BGP04217 495 aa17.32■□□□□ 0.36
VDR-207ENST00000550314 SLFN5Q08AF3 891 aa17.32■□□□□ 0.36
VDR-207ENST00000550314 KRT24Q2M2I5 525 aa17.32■□□□□ 0.36
VDR-207ENST00000550314 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
VDR-207ENST00000550314 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
VDR-207ENST00000550314 TJP1Q07157 1748 aa17.32■□□□□ 0.36
VDR-207ENST00000550314 ZBED9Q6R2W3 1325 aa17.31■□□□□ 0.36
VDR-207ENST00000550314 A0A087WZG4 1122 aa17.31■□□□□ 0.36
VDR-207ENST00000550314 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
VDR-207ENST00000550314 RFC4P35249 363 aa17.31■□□□□ 0.36
VDR-207ENST00000550314 IL6STP40189 918 aaPredicted RBP17.31■□□□□ 0.36
VDR-207ENST00000550314 HDGFL1Q5TGJ6 251 aa17.31■□□□□ 0.36
VDR-207ENST00000550314 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
VDR-207ENST00000550314 PNPLA7Q6ZV29 1317 aa17.3■□□□□ 0.36
VDR-207ENST00000550314 TWISTNBQ3B726 338 aaPredicted RBP17.3■□□□□ 0.36
VDR-207ENST00000550314 C8orf58Q8NAV2 365 aa17.3■□□□□ 0.36
VDR-207ENST00000550314 ZNF330Q9Y3S2 320 aaPredicted RBP17.3■□□□□ 0.36
VDR-207ENST00000550314 COL5A3P25940 1745 aaPredicted RBP17.3■□□□□ 0.36
VDR-207ENST00000550314 EXOSC9Q06265 439 aaKnown RBP17.29■□□□□ 0.36
VDR-207ENST00000550314 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
VDR-207ENST00000550314 SLC16A10Q8TF71 515 aa17.29■□□□□ 0.36
VDR-207ENST00000550314 EIF5P55010 431 aaKnown RBP17.28■□□□□ 0.36
VDR-207ENST00000550314 COL23A1Q86Y22 540 aaPredicted RBP17.28■□□□□ 0.36
VDR-207ENST00000550314 NECTIN2Q92692 538 aa17.28■□□□□ 0.36
VDR-207ENST00000550314 ARHGEF1Q92888 912 aaKnown RBP17.28■□□□□ 0.36
VDR-207ENST00000550314 CDCA7LQ96GN5 454 aa17.28■□□□□ 0.36
VDR-207ENST00000550314 ARXQ96QS3 562 aa17.28■□□□□ 0.36
VDR-207ENST00000550314 DBF4Q9UBU7 674 aaPredicted RBP17.28■□□□□ 0.36
VDR-207ENST00000550314 ZPR1O75312 459 aa17.27■□□□□ 0.36
VDR-207ENST00000550314 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
VDR-207ENST00000550314 STK31Q9BXU1 1019 aa17.27■□□□□ 0.36
VDR-207ENST00000550314 COL15A1P39059 1388 aa17.27■□□□□ 0.35
VDR-207ENST00000550314 MYL6BP14649 208 aa17.26■□□□□ 0.35
VDR-207ENST00000550314 DDX21Q9NR30 783 aaKnown RBP eCLIP17.26■□□□□ 0.35
VDR-207ENST00000550314 NBPF26B4DH59 902 aa17.25■□□□□ 0.35
VDR-207ENST00000550314 PIP4K2AP48426 406 aaPredicted RBP17.25■□□□□ 0.35
VDR-207ENST00000550314 NBPF10Q6P3W6 841 aaKnown RBP17.25■□□□□ 0.35
VDR-207ENST00000550314 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
VDR-207ENST00000550314 AMIGO3Q86WK7 504 aa17.25■□□□□ 0.35
VDR-207ENST00000550314 TRMT2AQ8IZ69 625 aaKnown RBP17.25■□□□□ 0.35
VDR-207ENST00000550314 NBPF15Q8N660 670 aa17.25■□□□□ 0.35
VDR-207ENST00000550314 HYPKQ9NX55 129 aa17.25■□□□□ 0.35
VDR-207ENST00000550314 LAMB4A4D0S4 1761 aa17.25■□□□□ 0.35
VDR-207ENST00000550314 VAMP4O75379 141 aa17.24■□□□□ 0.35
VDR-207ENST00000550314 DZIP3Q86Y13 1208 aaKnown RBP17.24■□□□□ 0.35
VDR-207ENST00000550314 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
VDR-207ENST00000550314 MTFR1LQ9H019 292 aa17.24■□□□□ 0.35
VDR-207ENST00000550314 CHPF2Q9P2E5 772 aa17.24■□□□□ 0.35
VDR-207ENST00000550314 NARFQ9UHQ1 456 aa17.24■□□□□ 0.35
VDR-207ENST00000550314 MYH14Q7Z406 1995 aaKnown RBP17.23■□□□□ 0.35
VDR-207ENST00000550314 CT47B1P0C2W7 299 aaPredicted RBP17.23■□□□□ 0.35
VDR-207ENST00000550314 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
VDR-207ENST00000550314 NLGN1Q8N2Q7 840 aa17.23■□□□□ 0.35
VDR-207ENST00000550314 ZNF428Q96B54 188 aa17.23■□□□□ 0.35
VDR-207ENST00000550314 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
VDR-207ENST00000550314 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
VDR-207ENST00000550314 ZBTB7AO95365 584 aa17.22■□□□□ 0.35
VDR-207ENST00000550314 PDIA6Q15084 440 aa17.22■□□□□ 0.35
VDR-207ENST00000550314 PDGFDQ9GZP0 370 aaPredicted RBP17.22■□□□□ 0.35
VDR-207ENST00000550314 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
VDR-207ENST00000550314 ZNF652Q9Y2D9 606 aa17.22■□□□□ 0.35
VDR-207ENST00000550314 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
VDR-207ENST00000550314 POLD1P28340 1107 aa17.21■□□□□ 0.35
VDR-207ENST00000550314 USPL1Q5W0Q7 1092 aa17.21■□□□□ 0.35
VDR-207ENST00000550314 SPON1Q9HCB6 807 aa17.21■□□□□ 0.35
VDR-207ENST00000550314 ANXA1P04083 346 aa17.2■□□□□ 0.34
VDR-207ENST00000550314 PROSER3Q2NL68 480 aa17.2■□□□□ 0.34
VDR-207ENST00000550314 SRP68Q9UHB9 627 aaKnown RBP17.2■□□□□ 0.34
VDR-207ENST00000550314 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
VDR-207ENST00000550314 ERVV-1B6SEH8 477 aa17.19■□□□□ 0.34
VDR-207ENST00000550314 RGL2O15211 777 aa17.19■□□□□ 0.34
VDR-207ENST00000550314 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
VDR-207ENST00000550314 GYS1P13807 737 aa17.19■□□□□ 0.34
VDR-207ENST00000550314 AIMP1Q12904 312 aaKnown RBP17.19■□□□□ 0.34
VDR-207ENST00000550314 COPS6Q7L5N1 327 aa17.19■□□□□ 0.34
VDR-207ENST00000550314 XAGE3Q8WTP9 111 aa17.19■□□□□ 0.34
VDR-207ENST00000550314 TUBGCP6Q96RT7 1819 aa17.19■□□□□ 0.34
VDR-207ENST00000550314 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
VDR-207ENST00000550314 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
VDR-207ENST00000550314 DDX58O95786 925 aaKnown RBP17.18■□□□□ 0.34
VDR-207ENST00000550314 MSL1Q68DK7 614 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms