RNA–Protein interactions for RNA: ENST00000549874.1

KIRREL3-209, Transcript of kirre like nephrin family adhesion molecule 3, humanhuman

TSL 1 (best)

Gene KIRREL3, Length 1,507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIRREL3-209ENST00000549874 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
KIRREL3-209ENST00000549874 SLC4A2P04920 1241 aa20.78■□□□□ 0.92
KIRREL3-209ENST00000549874 PLSCR1O15162 318 aa20.78■□□□□ 0.92
KIRREL3-209ENST00000549874 CYP19A1P11511 503 aaPredicted RBP20.78■□□□□ 0.92
KIRREL3-209ENST00000549874 DBF4Q9UBU7 674 aaPredicted RBP20.78■□□□□ 0.92
KIRREL3-209ENST00000549874 CICQ96RK0 1608 aaPredicted RBP20.78■□□□□ 0.92
KIRREL3-209ENST00000549874 ANXA1P04083 346 aa20.76■□□□□ 0.91
KIRREL3-209ENST00000549874 A1BGP04217 495 aa20.76■□□□□ 0.91
KIRREL3-209ENST00000549874 BRPF1P55201 1214 aaPredicted RBP20.76■□□□□ 0.91
KIRREL3-209ENST00000549874 PDIA6Q15084 440 aa20.76■□□□□ 0.91
KIRREL3-209ENST00000549874 PROSER3Q2NL68 480 aa20.76■□□□□ 0.91
KIRREL3-209ENST00000549874 DDX21Q9NR30 783 aaKnown RBP eCLIP20.76■□□□□ 0.91
KIRREL3-209ENST00000549874 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
KIRREL3-209ENST00000549874 PIP4K2AP48426 406 aaPredicted RBP20.75■□□□□ 0.91
KIRREL3-209ENST00000549874 SF3B2Q13435 895 aaKnown RBP20.75■□□□□ 0.91
KIRREL3-209ENST00000549874 FRAT1Q92837 279 aaPredicted RBP20.75■□□□□ 0.91
KIRREL3-209ENST00000549874 ERBB4Q15303 1308 aa20.75■□□□□ 0.91
KIRREL3-209ENST00000549874 MYL6BP14649 208 aa20.74■□□□□ 0.91
KIRREL3-209ENST00000549874 SLC27A3Q5K4L6 730 aa20.74■□□□□ 0.91
KIRREL3-209ENST00000549874 LINC00116Q8NCU8 138 aa20.74■□□□□ 0.91
KIRREL3-209ENST00000549874 LRRC4BQ9NT99 713 aa20.74■□□□□ 0.91
KIRREL3-209ENST00000549874 NOB1Q9ULX3 412 aaKnown RBP20.74■□□□□ 0.91
KIRREL3-209ENST00000549874 KIF16BQ96L93 1317 aa20.74■□□□□ 0.91
KIRREL3-209ENST00000549874 TAF1LQ8IZX4 1826 aa20.74■□□□□ 0.91
KIRREL3-209ENST00000549874 NBPF26B4DH59 902 aa20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 TXNRD1Q16881 649 aa20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 NBPF14Q5TI25 921 aa20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 NBPF10Q6P3W6 841 aaKnown RBP20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 G2E3Q7L622 706 aa20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 PROM2Q8N271 834 aa20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 NBPF15Q8N660 670 aa20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 HYPKQ9NX55 129 aa20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 PLIN1O60240 522 aa20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 CRKLP46109 303 aaKnown RBP20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 RRP1P56182 461 aaKnown RBP20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 MYH14Q7Z406 1995 aaKnown RBP20.73■□□□□ 0.91
KIRREL3-209ENST00000549874 RGPD3A6NKT7 1758 aaPredicted RBP20.72■□□□□ 0.91
KIRREL3-209ENST00000549874 RGPD4Q7Z3J3 1758 aa20.72■□□□□ 0.91
KIRREL3-209ENST00000549874 CANXP27824 592 aaKnown RBP20.72■□□□□ 0.91
KIRREL3-209ENST00000549874 INTS5Q6P9B9 1019 aaKnown RBP20.72■□□□□ 0.91
KIRREL3-209ENST00000549874 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.72■□□□□ 0.91
KIRREL3-209ENST00000549874 PHAXQ9H814 394 aaKnown RBP20.72■□□□□ 0.91
KIRREL3-209ENST00000549874 CCDC87Q9NVE4 849 aa20.72■□□□□ 0.91
KIRREL3-209ENST00000549874 RNF123Q5XPI4 1314 aa20.72■□□□□ 0.91
KIRREL3-209ENST00000549874 FLIIQ13045 1269 aa20.71■□□□□ 0.91
KIRREL3-209ENST00000549874 ZBTB1Q9Y2K1 713 aa20.71■□□□□ 0.91
KIRREL3-209ENST00000549874 IPO8O15397 1037 aaKnown RBP20.7■□□□□ 0.9
KIRREL3-209ENST00000549874 EN1Q05925 392 aaPredicted RBP20.7■□□□□ 0.9
KIRREL3-209ENST00000549874 ZKSCAN2Q63HK3 967 aa20.7■□□□□ 0.9
KIRREL3-209ENST00000549874 LRP10Q7Z4F1 713 aa20.7■□□□□ 0.9
KIRREL3-209ENST00000549874 CCDC125Q86Z20 511 aa20.7■□□□□ 0.9
KIRREL3-209ENST00000549874 BAG6P46379 1132 aa20.69■□□□□ 0.9
KIRREL3-209ENST00000549874 CNTNAP4Q9C0A0 1308 aa20.69■□□□□ 0.9
KIRREL3-209ENST00000549874 RC3H1Q5TC82 1133 aaKnown RBP20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 CAMKK2Q96RR4 588 aa20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 ZNF330Q9Y3S2 320 aaPredicted RBP20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 PTPRCP08575 1304 aa20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 RREB1Q92766 1687 aa20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 C4BP0C0L5 1744 aa20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 AIMP1Q12904 312 aaKnown RBP20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 FKBP5Q13451 457 aaPredicted RBP20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 EZH2Q15910 746 aaKnown RBP20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 ATF7IPQ6VMQ6 1270 aa20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 COPS6Q7L5N1 327 aa20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 DEFB132Q7Z7B7 95 aa20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 XAGE3Q8WTP9 111 aa20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 ARHGAP45Q92619 1136 aa20.68■□□□□ 0.9
KIRREL3-209ENST00000549874 IL6STP40189 918 aaPredicted RBP20.67■□□□□ 0.9
KIRREL3-209ENST00000549874 TRIM27P14373 513 aa20.66■□□□□ 0.9
KIRREL3-209ENST00000549874 HMGB2P26583 209 aaKnown RBP20.66■□□□□ 0.9
KIRREL3-209ENST00000549874 TNNQ9UQP3 1299 aa20.66■□□□□ 0.9
KIRREL3-209ENST00000549874 ILDR2Q71H61 639 aa20.65■□□□□ 0.9
KIRREL3-209ENST00000549874 API5Q9BZZ5 524 aaKnown RBP20.65■□□□□ 0.9
KIRREL3-209ENST00000549874 GNPATO15228 680 aa20.64■□□□□ 0.9
KIRREL3-209ENST00000549874 EIF5P55010 431 aaKnown RBP20.64■□□□□ 0.9
KIRREL3-209ENST00000549874 NPM2Q86SE8 214 aaKnown RBP20.64■□□□□ 0.9
KIRREL3-209ENST00000549874 CLUAP1Q96AJ1 413 aa20.64■□□□□ 0.9
KIRREL3-209ENST00000549874 AK7Q96M32 723 aa20.64■□□□□ 0.9
KIRREL3-209ENST00000549874 DDX58O95786 925 aaKnown RBP20.63■□□□□ 0.89
KIRREL3-209ENST00000549874 C20orf194Q5TEA3 1177 aa20.63■□□□□ 0.89
KIRREL3-209ENST00000549874 TTLL7Q6ZT98 887 aa20.63■□□□□ 0.89
KIRREL3-209ENST00000549874 UPF1Q92900 1129 aaKnown RBP eCLIP20.63■□□□□ 0.89
KIRREL3-209ENST00000549874 RPS6KA4O75676 772 aa20.63■□□□□ 0.89
KIRREL3-209ENST00000549874 DZIP1LQ8IYY4 767 aaKnown RBP20.63■□□□□ 0.89
KIRREL3-209ENST00000549874 ARXQ96QS3 562 aa20.63■□□□□ 0.89
KIRREL3-209ENST00000549874 PI4KAP2A4QPH2 592 aa20.62■□□□□ 0.89
KIRREL3-209ENST00000549874 F6X3S4 739 aa20.62■□□□□ 0.89
KIRREL3-209ENST00000549874 MS4A1P11836 297 aa20.62■□□□□ 0.89
KIRREL3-209ENST00000549874 KSR2Q6VAB6 950 aa20.62■□□□□ 0.89
KIRREL3-209ENST00000549874 ANKRD13DQ6ZTN6 518 aa20.62■□□□□ 0.89
KIRREL3-209ENST00000549874 FTSJ3Q8IY81 847 aaKnown RBP20.62■□□□□ 0.89
KIRREL3-209ENST00000549874 PI4KAP1Q8N8J0 262 aa20.62■□□□□ 0.89
KIRREL3-209ENST00000549874 PANK1Q8TE04 598 aa20.62■□□□□ 0.89
KIRREL3-209ENST00000549874 RTCBQ9Y3I0 505 aaKnown RBP20.62■□□□□ 0.89
KIRREL3-209ENST00000549874 RLBP1P12271 317 aa20.61■□□□□ 0.89
KIRREL3-209ENST00000549874 IRX6P78412 446 aaPredicted RBP20.61■□□□□ 0.89
KIRREL3-209ENST00000549874 PDE3AQ14432 1141 aa20.61■□□□□ 0.89
KIRREL3-209ENST00000549874 RIC3Q7Z5B4 369 aa20.61■□□□□ 0.89
KIRREL3-209ENST00000549874 ADCY9O60503 1353 aa20.61■□□□□ 0.89
KIRREL3-209ENST00000549874 COL15A1P39059 1388 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms